BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00011115
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   223   2e-56
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   222   3e-56
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   220   2e-55
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   218   8e-55
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   214   7e-54

>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  223 bits (568), Expect = 2e-56
 Identities = 99/114 (86%), Positives = 105/114 (92%)
 Frame = +1

Query: 31  MSTIKFCRKCNNTMYPKEDEEQNRLLYVCPNCDHQEAADNNCVYRKEIHHSVGERSQVLQ 210
           MST+KFCR+CNN +YPKED EQ  LLY C NCDHQE A+NNCVYR EIHHSVGER+QVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 211 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 372
           DVAADPTLPRTKSVRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  222 bits (566), Expect = 3e-56
 Identities = 97/114 (85%), Positives = 105/114 (92%)
 Frame = +1

Query: 31  MSTIKFCRKCNNTMYPKEDEEQNRLLYVCPNCDHQEAADNNCVYRKEIHHSVGERSQVLQ 210
           MST+KFCR+CNN +YPKED ++  LLY C NCDHQE ADNNCVYR EIHH+VGER+QVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 211 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 372
           DVAADPTLPRTK+VRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  220 bits (560), Expect = 2e-55
 Identities = 98/114 (85%), Positives = 103/114 (90%)
 Frame = +1

Query: 31  MSTIKFCRKCNNTMYPKEDEEQNRLLYVCPNCDHQEAADNNCVYRKEIHHSVGERSQVLQ 210
           MST+KFCR+CNN +YPKED EQ  LLY C NCDHQEAADN CVYR EIHHSV ER+QVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 211 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 372
           DVAADPTLPRTK+VRC  CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  218 bits (554), Expect = 8e-55
 Identities = 96/114 (84%), Positives = 103/114 (90%)
 Frame = +1

Query: 31  MSTIKFCRKCNNTMYPKEDEEQNRLLYVCPNCDHQEAADNNCVYRKEIHHSVGERSQVLQ 210
           MS +KFCR+CNN +YPKED +Q  LL+ C NCDHQE ADN CVYR EIHHSVGER+QVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 211 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 372
           DVAADPTLPRTKSVRC+ CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  214 bits (546), Expect = 7e-54
 Identities = 93/114 (81%), Positives = 101/114 (88%)
 Frame = +1

Query: 31  MSTIKFCRKCNNTMYPKEDEEQNRLLYVCPNCDHQEAADNNCVYRKEIHHSVGERSQVLQ 210
           MST+KFCR+CNN +YPKED +Q  LLY C NCDHQE ADNNCVYR E+HHS GER+QVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQ 60

Query: 211 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 372
           DVA+DPTLPRTKSVRC  C HGEAVFFQAT RGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVASDPTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114