BLASTX nr result

ID: Angelica22_contig00010944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010944
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   160   2e-37
gb|AFK36810.1| unknown [Lotus japonicus]                              160   2e-37
gb|ABW81101.1| RNApol24 [Cleome spinosa]                              154   1e-35
ref|XP_003600908.1| DNA-directed RNA polymerases I and III subun...   153   3e-35
gb|AFK35687.1| unknown [Medicago truncatula]                          152   4e-35

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 89/105 (84%)
 Frame = +1

Query: 58  MEQGTVEDPSASTFTLTEEDHTLANSLRFALNQDPRITFSGYSIPHPSEARVNIRVQTTG 237
           ME G+  D S STF+L++EDHTLANS+RF LNQDPR+ F GYSIPHPS+ARVNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 238 DPASEVLRDSCQDLMLMCQHIRGTFDQAVLDFTNGKGLKDMDIKK 372
           D A EVL+D+CQDLMLMCQH+R TFD+AV+D+   K +KDM I+K
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMSIEK 105


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/103 (71%), Positives = 88/103 (85%)
 Frame = +1

Query: 58  MEQGTVEDPSASTFTLTEEDHTLANSLRFALNQDPRITFSGYSIPHPSEARVNIRVQTTG 237
           ME G+  D S STF+LT+EDHT AN++R+ LNQDPR+TF GYSIPHPS+ RVNIRVQTTG
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 238 DPASEVLRDSCQDLMLMCQHIRGTFDQAVLDFTNGKGLKDMDI 366
           +PA EVL+DSCQ +MLMCQH+RGTFD+AV DF + KG KDMDI
Sbjct: 61  EPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKSKKGGKDMDI 103


>gb|ABW81101.1| RNApol24 [Cleome spinosa]
          Length = 109

 Score =  154 bits (389), Expect = 1e-35
 Identities = 72/103 (69%), Positives = 84/103 (81%)
 Frame = +1

Query: 58  MEQGTVEDPSASTFTLTEEDHTLANSLRFALNQDPRITFSGYSIPHPSEARVNIRVQTTG 237
           ME G+  D S +TF+LTEEDHTLAN++RF LNQDPR+TF GYSIPHPS ARVNIRVQTTG
Sbjct: 1   MEHGSFTDHSHATFSLTEEDHTLANAVRFVLNQDPRVTFCGYSIPHPSHARVNIRVQTTG 60

Query: 238 DPASEVLRDSCQDLMLMCQHIRGTFDQAVLDFTNGKGLKDMDI 366
           DPA EVL+D+CQDLMLM +H+RG FD AV DF  G   + MD+
Sbjct: 61  DPAREVLKDACQDLMLMNRHVRGVFDNAVADFKKGNQTESMDV 103


>ref|XP_003600908.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355489956|gb|AES71159.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 218

 Score =  153 bits (386), Expect = 3e-35
 Identities = 73/111 (65%), Positives = 83/111 (74%)
 Frame = +1

Query: 37  QREEKRGMEQGTVEDPSASTFTLTEEDHTLANSLRFALNQDPRITFSGYSIPHPSEARVN 216
           Q E K  ME G   D S STF+L  EDHT +NS+RF LNQDPR+TF GYSIPHPSE RVN
Sbjct: 97  QDEHKLTMEHGLYSDLSKSTFSLVNEDHTFSNSVRFTLNQDPRVTFCGYSIPHPSENRVN 156

Query: 217 IRVQTTGDPASEVLRDSCQDLMLMCQHIRGTFDQAVLDFTNGKGLKDMDIK 369
           +RVQTTGDPASEVL+D CQDLMLMCQH+R TF +AV DF   K ++    K
Sbjct: 157 VRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEK 207


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  152 bits (384), Expect = 4e-35
 Identities = 71/104 (68%), Positives = 82/104 (78%)
 Frame = +1

Query: 58  MEQGTVEDPSASTFTLTEEDHTLANSLRFALNQDPRITFSGYSIPHPSEARVNIRVQTTG 237
           ME G+  D S STF+L +EDHT ANS+RF LNQDPR+TF GYSIPHPSE RVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 238 DPASEVLRDSCQDLMLMCQHIRGTFDQAVLDFTNGKGLKDMDIK 369
           DPASEVL+D CQDLMLMCQH+R TF +AV DF   K ++    K
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEK 104


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