BLASTX nr result

ID: Angelica22_contig00010568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010568
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   561   e-157
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   557   e-156
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   548   e-153

>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  571 bits (1472), Expect = e-160
 Identities = 285/367 (77%), Positives = 325/367 (88%), Gaps = 1/367 (0%)
 Frame = +3

Query: 171  MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 350
            MS  ++QPVGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 351  NVSKGVLAKSRDLKKAFGNDEYDDEEKIDHEKICLEILEKGELQVAGKERESQLSSQFRD 530
            NVSKGVLAK+ DL KAFG+D        DH KICLEILEKGELQVAGKER+SQLSSQFRD
Sbjct: 61   NVSKGVLAKNSDLVKAFGHD--------DHTKICLEILEKGELQVAGKERDSQLSSQFRD 112

Query: 531  IATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKNFPIKRS 710
            IATIVMQKTINPET RPYTISM+ERLMHEIHFAVDPH+SSKKQAL+VIRELQK+FPIKRS
Sbjct: 113  IATIVMQKTINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRS 172

Query: 711  PMRLRLTVPGQAFSSVSEKLNEWKSSIVSKEESGNQLSVICEMDPGFFRDCDAMVRNLQG 890
            PMRLRL V GQ F ++ EKLN W +++VSK+ESG+  SVICEMDPGFFRDCDA+VRNLQG
Sbjct: 173  PMRLRLAVIGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQG 232

Query: 891  RLEILAISVHAEGDTNVDHYDDHEEPASNLPKASTASDNQLSEKLQKQTIS-EKKADAVG 1067
            R+EILA+SVH EGDT+VD +DD+E+    LPK S  S+ QLSEK+QKQTIS EKKAD + 
Sbjct: 233  RMEILAVSVHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEEKKADTLA 292

Query: 1068 DVKQQSKCSTCNAFVGDTKQYREHFKSEWHKHNLRRKTKQLPPLSAEECMGDMEISDSRS 1247
               +Q+KCSTCNAFVGD KQ+R+HFKS+WHKHNL+RKTKQLPPL+AEEC+ DM+++DS++
Sbjct: 293  ---KQNKCSTCNAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKA 349

Query: 1248 DLKDYSF 1268
            DLK+YSF
Sbjct: 350  DLKEYSF 356


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  561 bits (1447), Expect = e-157
 Identities = 280/366 (76%), Positives = 322/366 (87%)
 Frame = +3

Query: 171  MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 350
            MSK+++QP+GQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 351  NVSKGVLAKSRDLKKAFGNDEYDDEEKIDHEKICLEILEKGELQVAGKERESQLSSQFRD 530
            NVSKGVLAKS+DL+KAFG D        D  KICLEILEKGELQVAGKERESQL+SQFRD
Sbjct: 61   NVSKGVLAKSKDLEKAFGTD--------DQTKICLEILEKGELQVAGKERESQLTSQFRD 112

Query: 531  IATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKNFPIKRS 710
            IAT+VMQKT+NPET RPYTISMIERLMHEIHFAVDPH+SSKKQALEVIRELQK+FPIKRS
Sbjct: 113  IATMVMQKTVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRS 172

Query: 711  PMRLRLTVPGQAFSSVSEKLNEWKSSIVSKEESGNQLSVICEMDPGFFRDCDAMVRNLQG 890
            PMRLRL +     SS+ EKLN W +++VSK+ESG+QLSVICE+DPG FR+CD +VRNLQG
Sbjct: 173  PMRLRLAISEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQG 232

Query: 891  RLEILAISVHAEGDTNVDHYDDHEEPASNLPKASTASDNQLSEKLQKQTISEKKADAVGD 1070
            RLEILA+SVH EGD +VD YDD+E+  +++PK ST S  QLSEK+QKQTIS +K +  G+
Sbjct: 233  RLEILAMSVHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKNE-GE 291

Query: 1071 VKQQSKCSTCNAFVGDTKQYREHFKSEWHKHNLRRKTKQLPPLSAEECMGDMEISDSRSD 1250
            VKQ  KC+TCNAFVGD K+YR+HFKSEWHKHNLRRKT+ L PL+AEEC+ D+E+ DS++D
Sbjct: 292  VKQH-KCNTCNAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKAD 350

Query: 1251 LKDYSF 1268
            LKDYSF
Sbjct: 351  LKDYSF 356


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  557 bits (1436), Expect = e-156
 Identities = 282/366 (77%), Positives = 316/366 (86%)
 Frame = +3

Query: 171  MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 350
            MS+ + QP+GQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKDLDEVLQSH VYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 351  NVSKGVLAKSRDLKKAFGNDEYDDEEKIDHEKICLEILEKGELQVAGKERESQLSSQFRD 530
            NVSKGVLAKS+DL+ AFG +        D  +I LEIL+KGELQVAGKERESQLSSQFRD
Sbjct: 61   NVSKGVLAKSKDLEAAFGKER-------DQTEILLEILDKGELQVAGKERESQLSSQFRD 113

Query: 531  IATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKNFPIKRS 710
            IATIVMQKTINPET RPYT SMIERLMHEIHF+VDP++SSKKQALEVIRELQK+FPIKR 
Sbjct: 114  IATIVMQKTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRC 173

Query: 711  PMRLRLTVPGQAFSSVSEKLNEWKSSIVSKEESGNQLSVICEMDPGFFRDCDAMVRNLQG 890
            PMRLRLTVP Q FSS+ EKLN W +SIVSK+ESG QLS+ICEM+PG FRDCDA+VRNLQG
Sbjct: 174  PMRLRLTVPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQG 233

Query: 891  RLEILAISVHAEGDTNVDHYDDHEEPASNLPKASTASDNQLSEKLQKQTISEKKADAVGD 1070
            RLEILA+S+H EGDT+VD YDDHE   S LPK S     QLSEK+Q+QTIS   +   G+
Sbjct: 234  RLEILAVSLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGE 293

Query: 1071 VKQQSKCSTCNAFVGDTKQYREHFKSEWHKHNLRRKTKQLPPLSAEECMGDMEISDSRSD 1250
            VK Q+KCSTC+AFVGD+KQYREHFKSEWHKHNL RKT+QLPPLSAEEC+ DME++D ++D
Sbjct: 294  VK-QNKCSTCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKAD 352

Query: 1251 LKDYSF 1268
            LKDYSF
Sbjct: 353  LKDYSF 358


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  553 bits (1424), Expect = e-155
 Identities = 282/368 (76%), Positives = 321/368 (87%), Gaps = 2/368 (0%)
 Frame = +3

Query: 171  MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGVEKDLDEVLQSH-TVY 347
            MS  + QPVGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSH TVY
Sbjct: 1    MSVKLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVY 60

Query: 348  SNVSKGVLAKSRDLKKAFGNDEYDDEEKIDHEKICLEILEKGELQVAGKERESQLSSQFR 527
            SNVSKG+LAKS DL KAFG+D        D  +ICLEIL+KGELQVAGKERESQLSSQFR
Sbjct: 61   SNVSKGILAKSLDLNKAFGHD--------DQTRICLEILDKGELQVAGKERESQLSSQFR 112

Query: 528  DIATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKNFPIKR 707
            DIATIVMQKTINPET RPYTISMIERLMHE HFAV+PHNSSKKQAL+VIRELQK+FPIKR
Sbjct: 113  DIATIVMQKTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKR 172

Query: 708  SPMRLRLTVPGQAFSSVSEKLNEWKSSIVSKEESGNQLSVICEMDPGFFRDCDAMVRNLQ 887
            SPMRL LTV GQ FS++ EKL  W +++VSK+ESG++ S+ICEMDPGFFRDCD +VRNLQ
Sbjct: 173  SPMRLGLTVSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQ 232

Query: 888  GRLEILAISVHAEGDTNVDHYDDHEEPASNLPKASTASDNQLSEKLQKQTIS-EKKADAV 1064
            GRLEILA+SVH E DT+VD YDD+E+  S LPK ST S  QLSEK+QKQT+S EKKA A 
Sbjct: 233  GRLEILAVSVHFEEDTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSDEKKAGA- 291

Query: 1065 GDVKQQSKCSTCNAFVGDTKQYREHFKSEWHKHNLRRKTKQLPPLSAEECMGDMEISDSR 1244
             +VK Q+KCSTCN  VGD KQ+R+HFKS+WHKHNL+RKTKQLPPL++EEC+GDM+++DS 
Sbjct: 292  -EVK-QNKCSTCNVSVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSN 349

Query: 1245 SDLKDYSF 1268
            +D+K+YSF
Sbjct: 350  TDIKEYSF 357


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  548 bits (1412), Expect = e-153
 Identities = 275/380 (72%), Positives = 319/380 (83%), Gaps = 14/380 (3%)
 Frame = +3

Query: 171  MSKTIVQPVGQKRLTNVAVVRLKKHGCRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 350
            MSKT+VQPVGQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQSHTVYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 351  NVSKGVLAKSRDLKKAFGNDEYDDEEKIDHEKICLEILEKGELQVAGKERESQLSSQFRD 530
            NVSKGVLAKS+DL KAFG+D        DH KIC++ILEKGELQVAGKERESQ SSQFRD
Sbjct: 61   NVSKGVLAKSKDLMKAFGSD--------DHTKICIDILEKGELQVAGKERESQFSSQFRD 112

Query: 531  IATIVMQKTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKNFPIKRS 710
            IATIVMQKTINPET RPYTI M+ERLMHEIHFAVDPH++SKKQAL+VIRELQK FPIKRS
Sbjct: 113  IATIVMQKTINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRS 172

Query: 711  PMRLRLTVPGQAFSSVSEKLNEWKSSIVSKEESGNQLSVICEMDPGFFRDCDAMVRNLQG 890
            PMRLRLTVP Q F S+ EKL EW++S+VSK+ESG Q+S +CEM+PG FR+CD+ VRN+QG
Sbjct: 173  PMRLRLTVPVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQG 232

Query: 891  RLEILAISVHAEGDTNVDHYDDHEE----------PASNLPKASTASDNQLSEKLQKQTI 1040
            RLEILA+SVHAEGDTN+DHYD+H++          PA    K  T    +LS+K+QKQ I
Sbjct: 233  RLEILAVSVHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKMQKQEI 292

Query: 1041 SEKKADAV----GDVKQQSKCSTCNAFVGDTKQYREHFKSEWHKHNLRRKTKQLPPLSAE 1208
            S   AD +    G+ K+ +KCSTCN FVG+ K+YREH KS+WHKHNL+RKT++LPPLSAE
Sbjct: 293  S--TADTIKQEGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAE 350

Query: 1209 ECMGDMEISDSRSDLKDYSF 1268
            ECM ++++ DSR+DLKDYSF
Sbjct: 351  ECMSEIDMDDSRADLKDYSF 370


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