BLASTX nr result

ID: Angelica22_contig00010468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010468
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   268   1e-69
gb|ABK94132.1| unknown [Populus trichocarpa]                          265   1e-68
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi...   259   5e-67
ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago ...   259   7e-67
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...   259   7e-67

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  268 bits (686), Expect = 1e-69
 Identities = 134/217 (61%), Positives = 167/217 (76%), Gaps = 1/217 (0%)
 Frame = -1

Query: 912 EDVANTLTKQGFMSKAYISTATQSFSTD-GKTSDRVFANYNIYKGKAALSASPRLPQFTK 736
           E V  ++ +    + A  ST  Q+   D GK   RVFA Y+++KGKAALSA PRLP F +
Sbjct: 22  ECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNR 81

Query: 735 LDSGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDP 556
           LDSG +K++R+G IML+F P++GERKYDWEK+Q FALS TE+GSLIS+G  ++ EFFHDP
Sbjct: 82  LDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDP 141

Query: 555 SMKSSNAGQVRKTLQVKPHADGSGYFISLNVVNNVQKISERVTVPVTKAEFAVMRTAFSF 376
           SM SSNAGQVRK+L +KP+ADGSGYFISL+VVNN  K ++R TVPVT AEFAVMRTAFSF
Sbjct: 142 SMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSF 201

Query: 375 ALPHIMGWDRYINQPPKSIENNAPLVDPRVKSLEWDR 265
           ALPHIMGWDR+ N+P +SI  +   V P++   EWDR
Sbjct: 202 ALPHIMGWDRFTNRPSESISQSPSKVVPQLMEAEWDR 238


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  265 bits (677), Expect = 1e-68
 Identities = 130/205 (63%), Positives = 160/205 (78%), Gaps = 2/205 (0%)
 Frame = -1

Query: 873 SKAYISTATQSFSTDGKTS--DRVFANYNIYKGKAALSASPRLPQFTKLDSGSLKVDRQG 700
           S  +  T   S ST GK+S  DRVFA Y+++KGKAALS  P LP F+K  SG+L+VDR+G
Sbjct: 25  SALHALTFQASISTGGKSSIQDRVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRG 84

Query: 699 TIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSMKSSNAGQVRK 520
           ++ML+F PAIGERKYD+EK+Q FALS TE+GSLIS GP ++CEFFHDPSM SSNAGQVRK
Sbjct: 85  SMMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRK 144

Query: 519 TLQVKPHADGSGYFISLNVVNNVQKISERVTVPVTKAEFAVMRTAFSFALPHIMGWDRYI 340
            L +KPHADGSGYF+SL+VVNN+ K +ER TVPVT AEF V++TA SFALPHIMGWDR  
Sbjct: 145 NLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLT 204

Query: 339 NQPPKSIENNAPLVDPRVKSLEWDR 265
              P ++ +    VDP++  LEWD+
Sbjct: 205 TPLPGTLASKLSKVDPQMPDLEWDK 229


>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  259 bits (663), Expect = 5e-67
 Identities = 133/225 (59%), Positives = 171/225 (76%), Gaps = 8/225 (3%)
 Frame = -1

Query: 915 WEDVANTLTKQGFMSKAYISTATQSFSTDG--KTSDRVFANYNIYKGKAALSASPRLPQF 742
           +E+     T +GF S +  ST  + FS     K S R+FA Y+I+KGKAALS  P LP F
Sbjct: 21  FEERVKASTLRGFASWSSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPSF 80

Query: 741 TKLDSGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFH 562
           T++DSG+L++DR+G++M++F PAIGERKYDWEKKQ FALSPTE+GSLIS+G  ++ EFFH
Sbjct: 81  TEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFH 140

Query: 561 DPSMKSSNAGQVRKTLQVKPHADGSGYFISLNVVNNVQKISERVTVPVTKAEFAVMRTAF 382
           DPSMKSSNAGQVRK+L +KPHADGSGYFISL+V N + K ++   VPVTKAEFAVM+TAF
Sbjct: 141 DPSMKSSNAGQVRKSLSIKPHADGSGYFISLSVNNGILKTNDYFVVPVTKAEFAVMKTAF 200

Query: 381 SFALPHIMGWDRYINQ------PPKSIENNAPLVDPRVKSLEWDR 265
           SFALPHIMGW+R   Q      PP+++ +     DP+++ LEWD+
Sbjct: 201 SFALPHIMGWNRLTGQGNTEALPPRNVTHLK--TDPQLE-LEWDK 242


>ref|XP_003626470.1| hypothetical protein MTR_7g116270 [Medicago truncatula]
           gi|355501485|gb|AES82688.1| hypothetical protein
           MTR_7g116270 [Medicago truncatula]
           gi|388497124|gb|AFK36628.1| unknown [Medicago
           truncatula]
          Length = 226

 Score =  259 bits (662), Expect = 7e-67
 Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
 Frame = -1

Query: 858 STATQS-FSTDGKTSDRVFANYNIYKGKAALSASPRLPQFTKLDSGSLKVDRQGTIMLSF 682
           STAT + +S  G TSDR+FA Y++YKGKAA S SP LP FTKLDSG+L VDR G+IM+SF
Sbjct: 30  STATNNNYSAKGYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRHGSIMMSF 89

Query: 681 SPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSMKSSNAGQVRKTLQVKP 502
            PAIGERKYDWEK+Q FALS TE+GSLI++GP ++CEFFHDPSMKSSNAGQVRK+L +KP
Sbjct: 90  MPAIGERKYDWEKRQIFALSATEVGSLIAIGPQDSCEFFHDPSMKSSNAGQVRKSLSIKP 149

Query: 501 HADGSGYFISLNVVNNVQKISERVTVPVTKAEFAVMRTAFSFALPHIMGWDRYINQPPKS 322
           H+  +GYF+SL+VVN+V    +  +VPVT AEFAVM+TA SFALPHIMGWDR  NQ    
Sbjct: 150 HS--NGYFVSLSVVNSVLNTKDNFSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSG 207

Query: 321 IENNAPLVDPRVKSLEWDR 265
             +  P ++ ++  LEW++
Sbjct: 208 TVSFQPKMNSQILDLEWEK 226


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  259 bits (662), Expect = 7e-67
 Identities = 129/215 (60%), Positives = 157/215 (73%)
 Frame = -1

Query: 909 DVANTLTKQGFMSKAYISTATQSFSTDGKTSDRVFANYNIYKGKAALSASPRLPQFTKLD 730
           D+ N      F S+  +STAT  F+  G   DRV+A Y +YKGKA+L+  P LP+F++LD
Sbjct: 25  DIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYAPYCVYKGKASLTVYPVLPKFSRLD 84

Query: 729 SGSLKVDRQGTIMLSFSPAIGERKYDWEKKQHFALSPTEIGSLISLGPDEACEFFHDPSM 550
           SG LKVDR G +ML FSPA+GERKYDWEKKQ FALS  E+GSL+SL P   CEFFHDPSM
Sbjct: 85  SGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALSAVEVGSLLSLSPGGGCEFFHDPSM 144

Query: 549 KSSNAGQVRKTLQVKPHADGSGYFISLNVVNNVQKISERVTVPVTKAEFAVMRTAFSFAL 370
           K+SNAGQVRK+L VK   DG  YF+SL+VVNN+QK +ER+ VP+T AEFAVM+TA SFAL
Sbjct: 145 KTSNAGQVRKSLSVK-SMDGGSYFLSLSVVNNIQKTNERLAVPLTAAEFAVMQTACSFAL 203

Query: 369 PHIMGWDRYINQPPKSIENNAPLVDPRVKSLEWDR 265
           PHI+GWDRY+NQ         P  +    +LEWDR
Sbjct: 204 PHILGWDRYMNQ-------KLPRTEATPSTLEWDR 231


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