BLASTX nr result

ID: Angelica22_contig00010275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010275
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC43321.1| putative beta proteasome subunit [Nicotiana taba...   212   2e-63
ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis t...   211   4e-63
gb|AAM13010.1| 20S proteasome beta subunit PBB2 [Arabidopsis tha...   211   4e-63
ref|XP_002862504.1| predicted protein [Arabidopsis lyrata subsp....   211   5e-63
ref|NP_566818.1| proteasome subunit beta type-7-A [Arabidopsis t...   211   5e-63

>emb|CAC43321.1| putative beta proteasome subunit [Nicotiana tabacum]
          Length = 205

 Score =  212 bits (540), Expect(2) = 2e-63
 Identities = 102/109 (93%), Positives = 108/109 (99%)
 Frame = +3

Query: 231 TTIVGLVFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNIS 410
           TTIVGL+F+DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +S
Sbjct: 41  TTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVS 100

Query: 411 SQLKLHRYHTGRESRVVTALTLLKSHLFSYQGHVSAALVLGGVDVTGPH 557
           SQLKLHR+HTGRESRVVTALTLLK+HLFSYQG+VSAALVLGGVDVTGPH
Sbjct: 101 SQLKLHRFHTGRESRVVTALTLLKTHLFSYQGYVSAALVLGGVDVTGPH 149



 Score = 55.8 bits (133), Expect(2) = 2e-63
 Identities = 25/36 (69%), Positives = 29/36 (80%)
 Frame = +1

Query: 19  ANVDVEVPAKGGFSFDLCRRNEMLMKKGLKPSSFLK 126
           A   ++VP KGGFSFDLCRRNEML+ KGL+  SFLK
Sbjct: 3   AKTTMDVPQKGGFSFDLCRRNEMLVNKGLRSPSFLK 38


>ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|30693626|ref|NP_851108.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
           gi|82581524|sp|Q7DLS1.2|PSB7B_ARATH RecName:
           Full=Proteasome subunit beta type-7-B; AltName: Full=20S
           proteasome beta subunit B-2; AltName: Full=Proteasome
           component FC; AltName: Full=Proteasome subunit beta
           type-2; Flags: Precursor gi|3421104|gb|AAC32067.1| 20S
           proteasome beta subunit PBB2 [Arabidopsis thaliana]
           gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit
           PBB2 [Arabidopsis thaliana] gi|332007184|gb|AED94567.1|
           proteasome subunit beta type-7-B [Arabidopsis thaliana]
           gi|332007185|gb|AED94568.1| proteasome subunit beta
           type-7-B [Arabidopsis thaliana]
          Length = 274

 Score =  211 bits (538), Expect(2) = 4e-63
 Identities = 101/109 (92%), Positives = 106/109 (97%)
 Frame = +3

Query: 231 TTIVGLVFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNIS 410
           TTIVGL+FKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +S
Sbjct: 40  TTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVS 99

Query: 411 SQLKLHRYHTGRESRVVTALTLLKSHLFSYQGHVSAALVLGGVDVTGPH 557
           SQL+LHRY TGR+SRVVTALTLLK HLFSYQGHVSAALVLGGVD+TGPH
Sbjct: 100 SQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPH 148



 Score = 55.5 bits (132), Expect(2) = 4e-63
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +1

Query: 16  MANVDVEVPAKGGFSFDLCRRNEMLMKKGLKPSSFLK 126
           M+   V++P KGGFSFDLC+RN+ML +KGLK  SFLK
Sbjct: 1   MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLK 37


>gb|AAM13010.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
           gi|21387013|gb|AAM47910.1| 20S proteasome beta subunit
           PBB2 [Arabidopsis thaliana]
          Length = 274

 Score =  211 bits (538), Expect(2) = 4e-63
 Identities = 101/109 (92%), Positives = 106/109 (97%)
 Frame = +3

Query: 231 TTIVGLVFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNIS 410
           TTIVGL+FKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +S
Sbjct: 40  TTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVS 99

Query: 411 SQLKLHRYHTGRESRVVTALTLLKSHLFSYQGHVSAALVLGGVDVTGPH 557
           SQL+LHRY TGR+SRVVTALTLLK HLFSYQGHVSAALVLGGVD+TGPH
Sbjct: 100 SQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPH 148



 Score = 55.5 bits (132), Expect(2) = 4e-63
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +1

Query: 16  MANVDVEVPAKGGFSFDLCRRNEMLMKKGLKPSSFLK 126
           M+   V++P KGGFSFDLC+RN+ML +KGLK  SFLK
Sbjct: 1   MSQSSVDIPPKGGFSFDLCKRNDMLTQKGLKAPSFLK 37


>ref|XP_002862504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308064|gb|EFH38762.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  211 bits (537), Expect(2) = 5e-63
 Identities = 100/109 (91%), Positives = 106/109 (97%)
 Frame = +3

Query: 231 TTIVGLVFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNIS 410
           TTIVGL+FKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +S
Sbjct: 40  TTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVS 99

Query: 411 SQLKLHRYHTGRESRVVTALTLLKSHLFSYQGHVSAALVLGGVDVTGPH 557
           SQL+LHRY TGR+SRV+TALTLLK HLFSYQGHVSAALVLGGVD+TGPH
Sbjct: 100 SQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPH 148



 Score = 55.5 bits (132), Expect(2) = 5e-63
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +1

Query: 16  MANVDVEVPAKGGFSFDLCRRNEMLMKKGLKPSSFLK 126
           M+   V+V AKGGFSFDLC+RNEML +KGLK  SFLK
Sbjct: 1   MSQSTVDVSAKGGFSFDLCKRNEMLTQKGLKAPSFLK 37


>ref|NP_566818.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
           gi|82581523|sp|O23710.2|PSB7A_ARATH RecName:
           Full=Proteasome subunit beta type-7-A; AltName: Full=20S
           proteasome beta subunit B-1; AltName: Full=Proteasome
           component FA; AltName: Full=Proteasome component FB;
           AltName: Full=Proteasome subunit beta type-2; Flags:
           Precursor gi|3421102|gb|AAC32066.1| 20S proteasome beta
           subunit PBB1 [Arabidopsis thaliana]
           gi|7939516|dbj|BAA95719.1| 20S proteasome beta subunit;
           multicatalytic endopeptidase [Arabidopsis thaliana]
           gi|21554360|gb|AAM63467.1| 20S proteasome beta subunit
           PBB1 [Arabidopsis thaliana] gi|28058828|gb|AAO29958.1|
           20S proteasome beta subunit (PBB1) [Arabidopsis
           thaliana] gi|30023762|gb|AAP13414.1| At3g27430
           [Arabidopsis thaliana] gi|332643798|gb|AEE77319.1|
           proteasome subunit beta type-7-A [Arabidopsis thaliana]
          Length = 273

 Score =  211 bits (537), Expect(2) = 5e-63
 Identities = 100/109 (91%), Positives = 106/109 (97%)
 Frame = +3

Query: 231 TTIVGLVFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDNIS 410
           TTIVGL+FKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTD +S
Sbjct: 40  TTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVS 99

Query: 411 SQLKLHRYHTGRESRVVTALTLLKSHLFSYQGHVSAALVLGGVDVTGPH 557
           SQL+LHRY TGR+SRV+TALTLLK HLFSYQGHVSAALVLGGVD+TGPH
Sbjct: 100 SQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPH 148



 Score = 55.5 bits (132), Expect(2) = 5e-63
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +1

Query: 16  MANVDVEVPAKGGFSFDLCRRNEMLMKKGLKPSSFLK 126
           M+   V+VP KGGFSFDLC+RN+ML +KGLK  SFLK
Sbjct: 1   MSQSTVDVPPKGGFSFDLCKRNDMLTQKGLKAPSFLK 37


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