BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010133
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   560   e-157
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   560   e-157
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   558   e-157
ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerase II su...   545   e-153
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II su...   541   e-151

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 318

 Score =  560 bits (1444), Expect = e-157
 Identities = 279/319 (87%), Positives = 306/319 (95%)
 Frame = +3

Query: 57   MDGIASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS 236
            M+G ASYQRFP +KIRELKDDY KFELR+TDAS+ANALRRVMI+EVPTVAIDLVEIE+NS
Sbjct: 1    MEG-ASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 237  TVLNDEFLAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCIGDQTLD 416
            +VLNDEF+AHRLGL+PLTSERAMSMRFSRDCDACDGDGQC++CSVEFHLRAKCI DQTLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLD 119

Query: 417  VTSKDLYSSDHTVVPVDFSDASGYENSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 596
            VTSKDLYSSDHTVVPVDFSD+SGY++SEQRGIIIVKLRRGQEL+LRAIARKGIGKDHAKW
Sbjct: 120  VTSKDLYSSDHTVVPVDFSDSSGYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 597  SPAATVTFMYEPAIHINQEMMESLTLEEKQSFVDSSPTKVFEIDVETHQVKIVDSEAYAY 776
            SPAATVTFMYEP IHIN+++MESL+LEEKQS+V+SSPTKVF+ID  T QV +VD EAY Y
Sbjct: 180  SPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 777  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSE 956
            D+EV+KKAE+MGKPGLV I AKEDSFIFTVESTGAIKASQLVLNAI+ILKQKLDAVRLSE
Sbjct: 240  DEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 957  DTVEADDQFGELGAHMRGG 1013
            DTVEADDQFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  560 bits (1442), Expect = e-157
 Identities = 276/319 (86%), Positives = 306/319 (95%)
 Frame = +3

Query: 57   MDGIASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS 236
            M+G+ SYQRFP +KIRE+KDDYAKFELR TDAS+ANALRRVMI+EVPTVAIDLVEIE+NS
Sbjct: 1    MEGV-SYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 237  TVLNDEFLAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCIGDQTLD 416
            +VLNDEF+AHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC+ D+TLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLD 119

Query: 417  VTSKDLYSSDHTVVPVDFSDASGYENSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 596
            VTSKDL SSDHTVVPVDFSD+SGY++++++GIIIVKLRRGQEL+LRAIARKGIGKDHAKW
Sbjct: 120  VTSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 597  SPAATVTFMYEPAIHINQEMMESLTLEEKQSFVDSSPTKVFEIDVETHQVKIVDSEAYAY 776
            SPAATVTFMYEP IHIN+++MESLTLEEK S+V+SSPTKVF+ID  + QV + D+EAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 777  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSE 956
            DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAID+LKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 957  DTVEADDQFGELGAHMRGG 1013
            DTVEADDQFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
            vinifera]
          Length = 318

 Score =  558 bits (1439), Expect = e-157
 Identities = 275/319 (86%), Positives = 306/319 (95%)
 Frame = +3

Query: 57   MDGIASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS 236
            M+G+ SYQRFP +KIRE+KDDYAKFELR TDAS+ANALRRVMI+EVPTVAIDLVEIE+NS
Sbjct: 1    MEGV-SYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNS 59

Query: 237  TVLNDEFLAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCIGDQTLD 416
            +VLNDEF+AHRLGL+PLTSERAM+MRFSRDCDACDGDGQCEFCSVEFHLRAKC+ D+TLD
Sbjct: 60   SVLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLD 119

Query: 417  VTSKDLYSSDHTVVPVDFSDASGYENSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 596
            VTSKDL SSDHTVVPVDFSD+SGY++++++GIIIVKLRRGQEL+LRAIARKGIGKDHAKW
Sbjct: 120  VTSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 597  SPAATVTFMYEPAIHINQEMMESLTLEEKQSFVDSSPTKVFEIDVETHQVKIVDSEAYAY 776
            SPAATVTFMYEP IHIN+++MESLTLEEK S+V+SSPTKVF+ID  + QV + D+EAY Y
Sbjct: 180  SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 777  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSE 956
            DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAID+LKQKLDAVRLSE
Sbjct: 240  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 957  DTVEADDQFGELGAHMRGG 1013
            DTVEADDQFGELGAHMRGG
Sbjct: 300  DTVEADDQFGELGAHMRGG 318


>ref|XP_003529425.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Glycine max]
          Length = 319

 Score =  545 bits (1405), Expect = e-153
 Identities = 273/319 (85%), Positives = 296/319 (92%)
 Frame = +3

Query: 57   MDGIASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS 236
            M+G  SY R P VKIRELKDDYAKFELR+TDASIANALRRVMI+EVPTVAIDLVEIE+NS
Sbjct: 1    MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS 60

Query: 237  TVLNDEFLAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCIGDQTLD 416
            +VLNDEF+AHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLR KC+ DQTLD
Sbjct: 61   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD 120

Query: 417  VTSKDLYSSDHTVVPVDFSDASGYENSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 596
            VTSKDLYSSD TV PVDFSD S  ++   RGIIIVKLRRGQELKLRAIARKGIGKDHAKW
Sbjct: 121  VTSKDLYSSDPTVSPVDFSDPSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKW 180

Query: 597  SPAATVTFMYEPAIHINQEMMESLTLEEKQSFVDSSPTKVFEIDVETHQVKIVDSEAYAY 776
            SPAATVTFMYEP IHIN+++ME+LTLEEK+ +VDSSPT+VFEID  T QV +VD+EAY Y
Sbjct: 181  SPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTY 240

Query: 777  DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLSE 956
            DDEVLKKAEAMGKPGLVEI A++DSFIFTVESTGA+KASQLVLNAI+ILKQKLDAVRLSE
Sbjct: 241  DDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSE 300

Query: 957  DTVEADDQFGELGAHMRGG 1013
            DTVEADDQFGELGAHMRGG
Sbjct: 301  DTVEADDQFGELGAHMRGG 319


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
            [Glycine max]
          Length = 320

 Score =  541 bits (1394), Expect = e-151
 Identities = 273/320 (85%), Positives = 297/320 (92%), Gaps = 1/320 (0%)
 Frame = +3

Query: 57   MDGIASYQRFPTVKIRELKDDYAKFELRNTDASIANALRRVMISEVPTVAIDLVEIEINS 236
            M+G  SY R P VKIRELKDDYAKFELR+TDASIANALRRVMI+EVPTVAIDLVEIE+NS
Sbjct: 1    MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS 60

Query: 237  TVLNDEFLAHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCIGDQTLD 416
            +VLNDEF+AHRLGL+PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLR KC+ DQTLD
Sbjct: 61   SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD 120

Query: 417  VTSKDLYSSDHTVVPVDFSDASGYENSEQ-RGIIIVKLRRGQELKLRAIARKGIGKDHAK 593
            VTSKDLYSSD TV PVDFSD S  ++ +  RGIIIVKLRRGQELKLRAIARKGIGKDHAK
Sbjct: 121  VTSKDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAK 180

Query: 594  WSPAATVTFMYEPAIHINQEMMESLTLEEKQSFVDSSPTKVFEIDVETHQVKIVDSEAYA 773
            WSPAATVTFMYEP IHIN+++ME+LTLEEK+ +VDSSPT+VFEID  T QV +VD+EAY 
Sbjct: 181  WSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYT 240

Query: 774  YDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDILKQKLDAVRLS 953
            YDDEVLKKAEAMGKPGLVEI A++DSFIFTVESTGA+KASQLVLNAI+ILKQKLDAVRLS
Sbjct: 241  YDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLS 300

Query: 954  EDTVEADDQFGELGAHMRGG 1013
            EDTVEADDQFGELGAHMRGG
Sbjct: 301  EDTVEADDQFGELGAHMRGG 320