BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010041
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     230   3e-58
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   223   5e-56
gb|ABK26380.1| unknown [Picea sitchensis]                             219   4e-55
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   219   7e-55
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   219   7e-55

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  230 bits (586), Expect = 3e-58
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = -2

Query: 697 VVEYLFQDIFRVVGLDPDGKKFDKVTRIEAKSEQFDMYMQLDVNTDIYPLHEGDKFMMVL 518
           +VE LF+DIF +  +DPDGKKFDKV+RIEA+SEQFDMYMQLDVNT+IYPLH GDKF MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 517 ASTLNLDGTPDTGYFTPGGRKSLADEFEYVMNGKLYRISEEGSGANLKADIYVSFGGLLM 338
           A TL+LDGTPD+GY+  G RKSLAD+FEYVM+GKLY+ISEE SG N+K +IY SFGGLLM
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 337 MLKGDPSIAAKFELDQRLFILMRK 266
           MLKGDPS A  FELDQRLF+LMRK
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRK 144


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  223 bits (567), Expect = 5e-56
 Identities = 106/140 (75%), Positives = 125/140 (89%)
 Frame = -2

Query: 685 LFQDIFRVVGLDPDGKKFDKVTRIEAKSEQFDMYMQLDVNTDIYPLHEGDKFMMVLASTL 506
           LF DIF+V+ +DPDGKKFDKV+RIEA+SEQ DMYMQLDVNT+IYP+H G+KF M LASTL
Sbjct: 5   LFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTL 64

Query: 505 NLDGTPDTGYFTPGGRKSLADEFEYVMNGKLYRISEEGSGANLKADIYVSFGGLLMMLKG 326
           +LDGTPDTGY+T  GRKSLAD+FEYVM+GKLY+ISEEGSG N+K  IYVSFGGLLMML G
Sbjct: 65  DLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSG 124

Query: 325 DPSIAAKFELDQRLFILMRK 266
           DP+  AK +LDQR+F+L+RK
Sbjct: 125 DPANTAKLDLDQRVFLLIRK 144


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  219 bits (559), Expect = 4e-55
 Identities = 106/144 (73%), Positives = 122/144 (84%)
 Frame = -2

Query: 697 VVEYLFQDIFRVVGLDPDGKKFDKVTRIEAKSEQFDMYMQLDVNTDIYPLHEGDKFMMVL 518
           +VE LF+DIF V  +DPDGKKFDKV+RIEA+SEQFDMYM LDVN D+YP+  G+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 517 ASTLNLDGTPDTGYFTPGGRKSLADEFEYVMNGKLYRISEEGSGANLKADIYVSFGGLLM 338
           A TLNLDGTPD GYF  GGRKSLAD++EYVM GKLY +SEEGSGAN+K +I  SFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 337 MLKGDPSIAAKFELDQRLFILMRK 266
           +LKGDPS A  FELDQRLF+LMRK
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRK 144


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  219 bits (557), Expect = 7e-55
 Identities = 106/147 (72%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = -2

Query: 703 RMVVEYLFQDIFRVVGLDPDGKKFDKVTRIEAKSEQFDMYMQLDVNTDIYPLHEGDKFMM 524
           R +VE+LF+DIF V  LDPDGKKFD+V+RIEA+SEQFDMYMQLDV T++YP+  GD+F M
Sbjct: 249 RKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTM 308

Query: 523 VLASTLNLDGTPDTGYFTPGGRKSLADEFEYVMNGKLYRISEE-GSGANLKADIYVSFGG 347
           VLA TLNLDGTPDTG++T  GRK+LAD+F+YVM+GKLY+ISE+  SG   K +IY SFGG
Sbjct: 309 VLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGG 368

Query: 346 LLMMLKGDPSIAAKFELDQRLFILMRK 266
           LLMMLKGDPS AA FELDQRLF+L+RK
Sbjct: 369 LLMMLKGDPSSAASFELDQRLFLLIRK 395


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  219 bits (557), Expect = 7e-55
 Identities = 106/147 (72%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
 Frame = -2

Query: 703 RMVVEYLFQDIFRVVGLDPDGKKFDKVTRIEAKSEQFDMYMQLDVNTDIYPLHEGDKFMM 524
           R +VE+LF+DIF V  LDPDGKKFD+V+RIEA+SEQFDMYMQLDV T++YP+  GD+F M
Sbjct: 44  RKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTM 103

Query: 523 VLASTLNLDGTPDTGYFTPGGRKSLADEFEYVMNGKLYRISEE-GSGANLKADIYVSFGG 347
           VLA TLNLDGTPDTG++T  GRK+LAD+F+YVM+GKLY+ISE+  SG   K +IY SFGG
Sbjct: 104 VLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGG 163

Query: 346 LLMMLKGDPSIAAKFELDQRLFILMRK 266
           LLMMLKGDPS AA FELDQRLF+L+RK
Sbjct: 164 LLMMLKGDPSSAASFELDQRLFLLIRK 190