BLASTX nr result

ID: Angelica22_contig00010025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010025
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886632.1| radical SAM domain-containing protein [Arabi...   273   4e-71
gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD prote...   272   5e-71
ref|NP_564755.1| radical SAM domain-containing protein [Arabidop...   272   5e-71
ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy...   270   2e-70
ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267...   263   4e-68

>ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332473|gb|EFH62891.1| radical SAM
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score =  273 bits (697), Expect = 4e-71
 Identities = 137/202 (67%), Positives = 159/202 (78%)
 Frame = +3

Query: 150 FNRLSQSCSSSAATRLSASPSSFSTVCSLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHG 329
           +  LS SC SS+++  +A   S     S   S++ +  +K  +LKGMTY   Q WV SHG
Sbjct: 55  YRSLSFSCFSSSSSSSAAYLPSLEEYPSTKGSVARDDNQK-VILKGMTYAALQEWVQSHG 113

Query: 330 YRPGQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRK 509
           +RPGQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRK
Sbjct: 114 FRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRK 173

Query: 510 ILFTLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQA 689
           ILFTLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQA
Sbjct: 174 ILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQA 233

Query: 690 VFARRLLMSEVGSIANVVFMGM 755
           V+ARRLL  EVGSI NVVFMGM
Sbjct: 234 VYARRLLSHEVGSITNVVFMGM 255


>gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD protein in NDK-GCPE
           intergenic region gb|493519 from E. coli sequence
           gb|U02965 [Arabidopsis thaliana]
          Length = 454

 Score =  272 bits (696), Expect = 5e-71
 Identities = 138/199 (69%), Positives = 157/199 (78%)
 Frame = +3

Query: 159 LSQSCSSSAATRLSASPSSFSTVCSLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHGYRP 338
           LS SC SS+++  +A   S     S   S+  +  +K  VLKGMTY   Q WV SHG+RP
Sbjct: 54  LSFSCFSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQK-VVLKGMTYASLQEWVQSHGFRP 112

Query: 339 GQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRKILF 518
           GQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRKILF
Sbjct: 113 GQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILF 172

Query: 519 TLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFA 698
           TLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQAV+A
Sbjct: 173 TLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYA 232

Query: 699 RRLLMSEVGSIANVVFMGM 755
           RRLL  EVGSI NVVFMGM
Sbjct: 233 RRLLSHEVGSITNVVFMGM 251


>ref|NP_564755.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|15451230|gb|AAK96886.1| Unknown protein [Arabidopsis
           thaliana] gi|20148295|gb|AAM10038.1| unknown protein
           [Arabidopsis thaliana] gi|332195547|gb|AEE33668.1|
           radical SAM domain-containing protein [Arabidopsis
           thaliana]
          Length = 458

 Score =  272 bits (696), Expect = 5e-71
 Identities = 138/199 (69%), Positives = 157/199 (78%)
 Frame = +3

Query: 159 LSQSCSSSAATRLSASPSSFSTVCSLDKSISTNQTKKKAVLKGMTYTQFQRWVSSHGYRP 338
           LS SC SS+++  +A   S     S   S+  +  +K  VLKGMTY   Q WV SHG+RP
Sbjct: 58  LSFSCFSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQK-VVLKGMTYASLQEWVQSHGFRP 116

Query: 339 GQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQAEFEVFKLKDILTASDGTRKILF 518
           GQALMLWK LY DNIWA ++++LEGLNKD K+M+++ AEF     KDI +ASDGTRKILF
Sbjct: 117 GQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILF 176

Query: 519 TLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFA 698
           TLDDGLVIETVVIP D+GRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLT AEIVEQAV+A
Sbjct: 177 TLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYA 236

Query: 699 RRLLMSEVGSIANVVFMGM 755
           RRLL  EVGSI NVVFMGM
Sbjct: 237 RRLLSHEVGSITNVVFMGM 255


>ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
           [Glycine max]
          Length = 445

 Score =  270 bits (691), Expect = 2e-70
 Identities = 130/171 (76%), Positives = 149/171 (87%)
 Frame = +3

Query: 243 SISTNQTKKKAVLKGMTYTQFQRWVSSHGYRPGQALMLWKCLYGDNIWAQSIEDLEGLNK 422
           S++ +    K +LKGMTY + ++WV SHGYRPGQA+MLWK +YG+NIWA  I++LEGLNK
Sbjct: 72  SVAISNEGLKMLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELEGLNK 131

Query: 423 DFKKMLNKQAEFEVFKLKDILTASDGTRKILFTLDDGLVIETVVIPNDKGRTTVCVSSQV 602
           DFKKMLN+ AEF+    K+I TASDGTRKILFTL+DGLVIETVVIP D+GRTTVCVSSQV
Sbjct: 132 DFKKMLNENAEFKALTQKEIRTASDGTRKILFTLEDGLVIETVVIPCDRGRTTVCVSSQV 191

Query: 603 GCAMNCQFCYTGRMGLKRNLTAAEIVEQAVFARRLLMSEVGSIANVVFMGM 755
           GCAMNCQFCYTGRMGL+R+LTAAEIVEQAVFARRLL  EVGSI NVVFMGM
Sbjct: 192 GCAMNCQFCYTGRMGLRRHLTAAEIVEQAVFARRLLTDEVGSITNVVFMGM 242


>ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267261 [Vitis vinifera]
          Length = 907

 Score =  263 bits (671), Expect = 4e-68
 Identities = 127/162 (78%), Positives = 140/162 (86%)
 Frame = +3

Query: 270 KAVLKGMTYTQFQRWVSSHGYRPGQALMLWKCLYGDNIWAQSIEDLEGLNKDFKKMLNKQ 449
           K +LKGM Y + Q WV SHGYRPGQALMLWK LYG+NIWA  I++LEGLNKDFK ML++ 
Sbjct: 78  KVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEH 137

Query: 450 AEFEVFKLKDILTASDGTRKILFTLDDGLVIETVVIPNDKGRTTVCVSSQVGCAMNCQFC 629
           AEF+   LKD + ASDGTRKILFTLDDGLVIETV+IP D+GR TVCVSSQVGCAMNCQFC
Sbjct: 138 AEFKALTLKDSIKASDGTRKILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFC 197

Query: 630 YTGRMGLKRNLTAAEIVEQAVFARRLLMSEVGSIANVVFMGM 755
           YTGRMGL R+LTAAEIVEQAV+ARRL  SEVGSI NVVFMGM
Sbjct: 198 YTGRMGLTRHLTAAEIVEQAVYARRLFSSEVGSITNVVFMGM 239


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