BLASTX nr result

ID: Angelica22_contig00010018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00010018
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]       69   3e-10
dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   1e-09
gb|ADE76290.1| unknown [Picea sitchensis]                              67   2e-09
emb|CAJ38367.1| polyA-binding protein [Plantago major]                 67   2e-09
gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]             66   3e-09

>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
          Length = 658

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/46 (80%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +2

Query: 23  MLCENL---VDQLEHDHAAKVKGMPLEMDQTEVLHLLKSPDVLKAE 151
           ML ENL   VDQLEHDHAAKV GM LEMDQTEVLHLL+SPD LKA+
Sbjct: 582 MLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPDALKAK 627


>dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 744

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/60 (66%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +2

Query: 23  MLCENL---VDQLEHDHAAKVKGMPLEMDQTEVLHLLKSPDVLK---AESYICFTSTCEH 184
           ML ENL   VDQLEHD AAKV GM LEMDQTEVLHLL+SPD LK   AE+   F S  +H
Sbjct: 664 MLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVFRSAQQH 723


>gb|ADE76290.1| unknown [Picea sitchensis]
          Length = 313

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +2

Query: 38  LVDQLEHDHAAKVKGMPLEMDQTEVLHLLKSPDVLKAE 151
           LVDQLEHDHAAKV GM LEMDQTEVLHLL+SP+ LKA+
Sbjct: 243 LVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPEALKAK 280


>emb|CAJ38367.1| polyA-binding protein [Plantago major]
          Length = 314

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/46 (76%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +2

Query: 23  MLCENL---VDQLEHDHAAKVKGMPLEMDQTEVLHLLKSPDVLKAE 151
           ML ENL   VDQLEH+HAAKV GM LEMDQTEVLHLL+SPD LK++
Sbjct: 235 MLGENLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPDALKSK 280


>gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
          Length = 651

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/46 (78%), Positives = 38/46 (82%), Gaps = 3/46 (6%)
 Frame = +2

Query: 23  MLCENL---VDQLEHDHAAKVKGMPLEMDQTEVLHLLKSPDVLKAE 151
           ML ENL   VDQLEHD AAKV GM LEMDQTEVLHLL+SPD LKA+
Sbjct: 571 MLGENLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLLESPDALKAK 616


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