BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009995
         (3452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis...  1091   0.0  
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]  1086   0.0  
ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Popu...  1052   0.0  
gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]    1039   0.0  
ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thalian...  1037   0.0  

>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
            gi|297737082|emb|CBI26283.3| unnamed protein product
            [Vitis vinifera]
          Length = 877

 Score = 1091 bits (2821), Expect = 0.0
 Identities = 538/826 (65%), Positives = 666/826 (80%)
 Frame = +1

Query: 235  EERSFISDKGDIGFIDFDNDMSNCNYDVSTEGPVKISIPFPLVDNKPQSGYVGDTIVDKI 414
            +E S I DKG+IGFIDF+ND S C+Y+ S EGPV +S+PF     KP+S +VG+T  D +
Sbjct: 8    DECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAF-KGKPKSIFVGETATDCV 66

Query: 415  TILNTTSNSVELYRAEIYDSKPEKSFTLSLMEPPSECSDVEYIQQYMETFSLEDRVLQPG 594
            T+ NTTS  VEL+   I+ S PE SFT+SLMEPPS   D++YIQ+++E+F LEDRVLQPG
Sbjct: 67   TLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVDIKYIQEFLESFCLEDRVLQPG 126

Query: 595  KPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGNKTFRREKKKKQ 774
            + LT+W+SCKPKE+GLHT+ VH     D IER++F+LA D+V+ SLA NK + R  +KK 
Sbjct: 127  ETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPYSRGSRKKV 186

Query: 775  WPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVRDILEQKQIPELIQEGLTKENYTS 954
            +      E+V GSRP R + + F+ +L  Y IP+DVR+++E KQIP+ I EGLT++NY S
Sbjct: 187  FN---VQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYES 243

Query: 955  YFKHLVIMEEIKMEDDMRGYDMVHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFARLA 1134
            YFK L+IMEEI+ME+DMR YDM  V+M+ KG++FLTLEVPGLAEKRPSLV+GD IFA+LA
Sbjct: 244  YFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYIFAKLA 303

Query: 1135 SDDEYDSSRTYQGFIHRVEAEVVFLNFEQGFHSCFRASNLYNVQFTYNRLNMRRLYQAIE 1314
             +DE D S  YQGFIHRVEAE V+L F + F       +LYNV+FTYNR+NMRRLYQAI+
Sbjct: 304  YEDENDLSPPYQGFIHRVEAEQVYLGFAKEFIWHHTDESLYNVRFTYNRVNMRRLYQAID 363

Query: 1315 ASQCLEAEFLFPVDSLRSRVIQTNPLVPISPVLNEEQESAVQMILGCKGGAPYVIYGPPG 1494
            +++ LE + LFP DS R R+I+   +VPIS  LNEEQ  +++MILGC+G  PYVI+GPPG
Sbjct: 364  SAKGLEMDLLFPSDS-RRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGPPG 422

Query: 1495 TGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVRIQNKDILRLNALT 1674
            TGKT T++EAILQLY TQK+ RILVCAPSNSAADH+LE++L +KAV +Q  +I RLNA +
Sbjct: 423  TGKTKTMVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATS 482

Query: 1675 RPLEDFKPDYFKFSYYDEAERLFKCPPLMTLRRYKIVISTYASSSLLYAEGIKRDHFSHI 1854
            RP ED  PD+ +F + ++   +FKCPPL  L+RY+I+ISTY S++LLYAEG+KR HFSHI
Sbjct: 483  RPYEDMNPDFIRFCFSEDL--IFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFSHI 540

Query: 1855 FLDEAGQASEPETMVPLANLCTRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERLFE 2034
             LDEAGQASEPETM+PL++LC RKTVVVLAGDP QLGPVIYSKDAE Y LGKSYLERLFE
Sbjct: 541  LLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFE 600

Query: 2035 FKFYDQSDQNYVIKLVKNYRCHPAILHLPSSLFYQGELIACKDDETRFSAASEDLLPNKD 2214
             +FY + D+NYV KLV+NYRCHP ILHLPS LFY+GELI CKDD++  S    ++LPN+D
Sbjct: 601  CEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDDKSS-SMTWAEILPNRD 659

Query: 2215 FPVLFFGIQGFDEREGSNPSWFNRIEASKTVEIIRNLTETKGLSDEDIGVIAPYRQQVLK 2394
            FPVLF G+QG+DEREGSNPSWFNR EASK VEII+ LT ++ L +EDIGVI PYRQQVLK
Sbjct: 660  FPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVLK 719

Query: 2395 IKKALEDIDLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPRRFNV 2574
            +KKALE +D+  I+VGSVEQFQGQER+VII+STVRSTIKHN+FD  HCLGFLSNPRRFNV
Sbjct: 720  LKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRRFNV 779

Query: 2575 AITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPERE 2712
            AITRA+SLLI+IGNPHI+ KD YWNK+LWHC DN SY+GC LPER+
Sbjct: 780  AITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQ 825


>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
          Length = 877

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 537/826 (65%), Positives = 664/826 (80%)
 Frame = +1

Query: 235  EERSFISDKGDIGFIDFDNDMSNCNYDVSTEGPVKISIPFPLVDNKPQSGYVGDTIVDKI 414
            +E S I DKG+IGFIDF+ND S C+Y+ S EGPV +S+PF     KP+S +VG+T  D +
Sbjct: 8    DECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAF-KGKPKSIFVGETATDCV 66

Query: 415  TILNTTSNSVELYRAEIYDSKPEKSFTLSLMEPPSECSDVEYIQQYMETFSLEDRVLQPG 594
            T+ NTTS  VEL+   I+ S PE SFT+SLMEPPS    ++YIQ+++E+F LEDRVLQPG
Sbjct: 67   TLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVXIKYIQEFLESFCLEDRVLQPG 126

Query: 595  KPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGNKTFRREKKKKQ 774
            + LT+W+SCKPKE+GLHT+ VH     D IER++F+LA D+V+ SLA NK + R  +KK 
Sbjct: 127  ETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPYSRGSRKKV 186

Query: 775  WPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVRDILEQKQIPELIQEGLTKENYTS 954
            +      E+V GSRP R + + F+ +L  Y IP+DVR+++E KQIP+ I EGLT++NY S
Sbjct: 187  FN---VQEYVVGSRPARPNARSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYES 243

Query: 955  YFKHLVIMEEIKMEDDMRGYDMVHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFARLA 1134
            YFK L+IMEEI+ME+DMR YDM  V+M+ KG++FLTLEVPGLAEKRPSLV+GD IFA+LA
Sbjct: 244  YFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYIFAKLA 303

Query: 1135 SDDEYDSSRTYQGFIHRVEAEVVFLNFEQGFHSCFRASNLYNVQFTYNRLNMRRLYQAIE 1314
             +DE DSS  YQGFIHRVEAE V+L F + F       +LYNV+FTYNR+NMRRLYQAI+
Sbjct: 304  YEDENDSSPPYQGFIHRVEAEQVYLGFAREFIWHHTDESLYNVRFTYNRVNMRRLYQAID 363

Query: 1315 ASQCLEAEFLFPVDSLRSRVIQTNPLVPISPVLNEEQESAVQMILGCKGGAPYVIYGPPG 1494
            +++ LE + LFP DS R R+I+   +VPIS  LNEEQ  +++MILGC+G  PYVI+GPPG
Sbjct: 364  SAKGLEMDLLFPSDS-RRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGPPG 422

Query: 1495 TGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVRIQNKDILRLNALT 1674
            TGKT T++EAILQLY TQK+ RILVCAPSNSAADH+LE++L +KAV +Q  +I RLNA +
Sbjct: 423  TGKTKTLVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATS 482

Query: 1675 RPLEDFKPDYFKFSYYDEAERLFKCPPLMTLRRYKIVISTYASSSLLYAEGIKRDHFSHI 1854
            RP ED  PD+ +F   ++   +FKCPPL  L+RY+I+ISTY S++LLYAEG+KR HFSHI
Sbjct: 483  RPYEDMNPDFIRFCISEDL--IFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFSHI 540

Query: 1855 FLDEAGQASEPETMVPLANLCTRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERLFE 2034
             LDEAGQASEPETM+PL++LC RKTVVVLAGDP QLGPVIYSKDAE Y LGKSYLERLFE
Sbjct: 541  LLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFE 600

Query: 2035 FKFYDQSDQNYVIKLVKNYRCHPAILHLPSSLFYQGELIACKDDETRFSAASEDLLPNKD 2214
             +FY + D+NYV KLV+NYRCHP ILHLPS LFY+GELI CKD ++  S    ++LPN+D
Sbjct: 601  CEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDXKSS-SMTWAEILPNRD 659

Query: 2215 FPVLFFGIQGFDEREGSNPSWFNRIEASKTVEIIRNLTETKGLSDEDIGVIAPYRQQVLK 2394
            FPVLF G+QG+DEREGSNPSWFNR EASK VEII+ LT ++ L +EDIGVI PYRQQVLK
Sbjct: 660  FPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVLK 719

Query: 2395 IKKALEDIDLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPRRFNV 2574
            +KKALE +D+  I+VGSVEQFQGQER+VII+STVRSTIKHN+FD  HCLGFLSNPRRFNV
Sbjct: 720  LKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRRFNV 779

Query: 2575 AITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPERE 2712
            AITRA+SLLI+IGNPHI+ KD YWNK+LWHC DN SY+GC LPER+
Sbjct: 780  AITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQ 825


>ref|XP_002332671.1| hypothetical protein POPTRDRAFT_789212 [Populus trichocarpa]
            gi|222836465|gb|EEE74872.1| hypothetical protein
            POPTRDRAFT_789212 [Populus trichocarpa]
          Length = 894

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 530/829 (63%), Positives = 655/829 (79%), Gaps = 3/829 (0%)
 Frame = +1

Query: 232  GEERSFISDKGDIGFIDFDNDMSNCNYDVSTEGPVKISIPFPLVDNKPQSGYVGDTIVDK 411
            G+E S I DKG+I +ID+ ND S C+YD S EGP+ IS PFP  + KP+S +VG+T +D 
Sbjct: 9    GDECSVIGDKGEIEYIDYQNDKSVCSYDPSEEGPIVISAPFPFEEGKPRSVFVGETAIDS 68

Query: 412  ITILNTTSNSVELYRAEIYDSKPEKSFTLSLMEPPSECSDVEYIQQYMETFSLEDRVLQP 591
            ITI NTT+ +V+L+  +IY S PE SF LSLM+PPS  +DV+  + +M+   +EDR+LQP
Sbjct: 69   ITIKNTTAEAVDLW-TKIYASTPEDSFKLSLMKPPS-ANDVKCQEGFMDFSVMEDRMLQP 126

Query: 592  GKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGNKTFRREKKKK 771
            G+ LTIWLSCKPKELGL+T  VH    +D IER+ F+LA D ++ SLA  K F R ++KK
Sbjct: 127  GESLTIWLSCKPKELGLYTTVVHFDVGNDRIERVAFLLADDNISQSLASKKPFSRGQRKK 186

Query: 772  QWPNLVTNEFVP-GSRPPRASIQYFKNKLRVYPIPDDVRDILEQKQIPELIQEGLTKENY 948
            ++    T+ FV  GSRP RA  + +KN+L  Y IP D+R ++E+KQIP++I  GLT +NY
Sbjct: 187  KFS---TDTFVSAGSRPARAPGRAYKNRLPRYDIPKDIRALIERKQIPDVIMGGLTIDNY 243

Query: 949  TSYFKHLVIMEEIKMEDDMRGYDMVHVSMKSKGSRFLTLEVPGLAEKRPSLVYGDSIFAR 1128
             SYFK L+IMEEI++E+DMR +DM  V+M+ KG+ +L+L VPGLAE+RPSLV GD IF +
Sbjct: 244  ASYFKTLLIMEEIQLEEDMRSHDMECVTMRRKGN-YLSLVVPGLAERRPSLVQGDDIFVK 302

Query: 1129 LASDDEYDSSRTYQGFIHRVEAEVVFLNFEQGFHSCFRASNLYNVQFTYNRLNMRRLYQA 1308
            LA  D  D++  YQG+I+RVEA+ V+L F Q FHSC    +LYNV F YNR++MRRLYQA
Sbjct: 303  LADAD--DTTTPYQGYIYRVEADEVYLKFYQEFHSCHNDGHLYNVHFKYNRVSMRRLYQA 360

Query: 1309 IEASQCLEAEFLFPVDSLRSRVIQTNPLVPISPVLNEEQESAVQMILGCKGGAPYVIYGP 1488
            I+A++ LE E LFP ++  SR+I+T+ LVPIS  LNEEQ  +V+MILGCKGG PYVIYGP
Sbjct: 361  IDAAKDLETEMLFPSETSGSRLIETSTLVPISCSLNEEQICSVEMILGCKGGPPYVIYGP 420

Query: 1489 PGTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVRIQNKDILRLNA 1668
            PGTGKTMT+IEAILQLY+ +K ARILVCAPSNSAADH+LEK+L ++AV IQ K+I RLNA
Sbjct: 421  PGTGKTMTIIEAILQLYQNRKHARILVCAPSNSAADHLLEKLLSEEAVHIQEKEIFRLNA 480

Query: 1669 LTRPLEDFKPDYFKFSYYDEAERLFKCPPLMTLRRYKIVISTYASSSLLYAEGIKRDHFS 1848
             +RP +D KPD  +F  +DE   +F CPPL  L RY+I+ISTY S+SLL AEG+KR  FS
Sbjct: 481  TSRPFDDIKPDLIRFCLFDE--HIFTCPPLGALTRYRIIISTYMSASLLNAEGVKRGQFS 538

Query: 1849 HIFLDEAGQASEPETMVPLANLCTRKTVVVLAGDPKQLGPVIYSKDAEKYGLGKSYLERL 2028
            HIFLDEAGQASEPE+M+ ++N C R TVVVLAGDP QLGPVI+S+DAE YGLGKSYLERL
Sbjct: 539  HIFLDEAGQASEPESMISVSNFCNRDTVVVLAGDPMQLGPVIFSRDAESYGLGKSYLERL 598

Query: 2029 FEFKFYDQSDQNYVIKLVKNYRCHPAILHLPSSLFYQGELIACKD--DETRFSAASEDLL 2202
            FE + YD  D+NYV KL++NYRCHP ILHLPS+LFY+GELIACK+  D++       +LL
Sbjct: 599  FECESYDSGDENYVTKLIRNYRCHPEILHLPSTLFYEGELIACKESNDDSTSLMTLTNLL 658

Query: 2203 PNKDFPVLFFGIQGFDEREGSNPSWFNRIEASKTVEIIRNLTETKGLSDEDIGVIAPYRQ 2382
            P K+FPVLFFGIQG DERE +NPSWFNRIEASK VEI++ L     LSD DIGVI PYRQ
Sbjct: 659  PGKNFPVLFFGIQGCDEREANNPSWFNRIEASKVVEIVKKLATRGNLSDSDIGVITPYRQ 718

Query: 2383 QVLKIKKALEDIDLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGFLSNPR 2562
            QVLK+KKAL++ID+ +I+VGSVEQFQGQER+VIIVSTVRSTIKHNDFD  HCLGFLSNPR
Sbjct: 719  QVLKLKKALDNIDMPDIKVGSVEQFQGQERKVIIVSTVRSTIKHNDFDRVHCLGFLSNPR 778

Query: 2563 RFNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPER 2709
            RFNVAITRA SLLI+ GNPHI+ KD YWNKLLWHCVDN SY+GC LPE+
Sbjct: 779  RFNVAITRAISLLIITGNPHIISKDQYWNKLLWHCVDNDSYQGCALPEK 827


>gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 549/1037 (52%), Positives = 711/1037 (68%), Gaps = 31/1037 (2%)
 Frame = +1

Query: 208  MGGSIYDCGEERSFISDKGDIGFIDFDNDMSNCNYDVSTEGPVKISIPFPLVDNKPQSGY 387
            M  S Y   +E S I+DKG+IGFID+ ND S+  Y+   EGPV +S+PFP    KPQS  
Sbjct: 1    MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVT 60

Query: 388  VGDTIVDKITILNTTSNSVELYRAEIYDSKPEKSFTLSLMEPPSECSDVEYIQQYMETFS 567
            VG+T  D  T+ NT    V+L+  +IY S PE SFTLS+++PPS+ SD++  Q + ETF+
Sbjct: 61   VGETSFDSFTVKNTMDEPVDLW-TKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFT 119

Query: 568  LEDRVLQPGKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGNKT 747
            LEDR+L+PG  LTIW+SCKPK++GLHT  V +    D +ER+VF+LA DK++ SL  N+ 
Sbjct: 120  LEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRP 179

Query: 748  FRREKKKKQWPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVRDILEQKQIPELIQE 927
            + R ++  +  +   +++V GSRP +   + F+N+L +Y IP ++R+++E K+ P+ + E
Sbjct: 180  YSRSRRAPK-KDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNE 238

Query: 928  GLTKENYTSYFKHLVIMEEIKMEDDMRGYDMVHVSMKSKGSRFLTLEVPGLAEKRPSLVY 1107
            GLT  NY +Y+K L+IMEE+++E+DMR YDM +VSMK +G  +L+LEVPGLAE+RPSLV+
Sbjct: 239  GLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGI-YLSLEVPGLAERRPSLVH 297

Query: 1108 GDSIFARLASDDEYDSSRTYQGFIHRVEAEVVFLNFEQGFHSCFRASNLYNVQFTYNRLN 1287
            GD IF R A DD  D +  YQGF+HRVEA+ V L F   FH    A ++YNV+FTYNR+N
Sbjct: 298  GDFIFVRHAYDDGTDHA--YQGFVHRVEADEVHLKFASEFHQRHTAGSVYNVRFTYNRIN 355

Query: 1288 MRRLYQAIEASQCLEAEFLFPVDSLRSRVIQTNPLVPISPVLNEEQESAVQMILGCKGGA 1467
             RRLYQA++A++ L+  FLFP      R+I+T P VPISP LN EQ  +++M+LGCKG  
Sbjct: 356  TRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAP 415

Query: 1468 PYVIYGPPGTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVRIQNK 1647
            PYVI+GPPGTGKTMT++EAI+QLY TQ++AR+LVCAPSNSAADHILEK+L  + VRI++ 
Sbjct: 416  PYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDN 475

Query: 1648 DILRLNALTRPLEDFKPDYFKFSYYDEAERLFKCPPLMTLRRYKIVISTYASSSLLYAEG 1827
            +I RLNA TR  E+ KP+  +F ++DE   +FKCPPL  L RYK+V+STY S+SLL AEG
Sbjct: 476  EIFRLNAATRSYEEIKPEIIRFCFFDEL--IFKCPPLKALTRYKLVVSTYMSASLLNAEG 533

Query: 1828 IKRDHFSHIFLDEAGQASEPETMVPLANLCTRKTVVVLAGDPKQLGPVIYSKDAEKYGLG 2007
            +KR HF+HI LDEAGQASEPE M+ ++NLC  +TVVVLAGDP+QLGPVIYS+DAE  GLG
Sbjct: 534  VKRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLG 593

Query: 2008 KSYLERLFEFKFYDQSDQNYVIKLVKNYRCHPAILHLPSSLFYQGELIACKDDETRFSAA 2187
            KSYLERLFE  +Y + D+NYV KLVKNYRCHP IL LPS LFY GEL+A K+ ET    A
Sbjct: 594  KSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKE-ETDSVLA 652

Query: 2188 SEDLLPNKDFPVLFFGIQGFDEREGSNPSWFNRIEASKTVEIIRNLTETKGLSDEDIGVI 2367
            S + LPNK+FP++F+GIQG DEREG+NPSWFNRIE SK +E I+ LT    + +EDIGVI
Sbjct: 653  SLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVI 712

Query: 2368 APYRQQVLKIKKALEDIDLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGF 2547
             PYRQQV+KIK+ L+ +D++ ++VGSVEQFQGQE+QVII+STVRSTIKHN+FD  +CLGF
Sbjct: 713  TPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGF 772

Query: 2548 LSNPRRFNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREXXXXX 2727
            LSNPRRFNVAITRA SLL++IGNPHI+CKD  WNKLLW CVDN +Y+GC LPE+E     
Sbjct: 773  LSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQE----- 827

Query: 2728 XXXXXXXVNEPWQGECSELGKQEGFGELSQENEWEESSQA--GGWNQDNCDPPWEGENCE 2901
                   V EP++ E S  G Q        E EW  S +   GG N          EN E
Sbjct: 828  -----EFVEEPFKQEGSSNGPQ-----YPPEAEWNNSGELNNGGAN----------ENGE 867

Query: 2902 ARGETSQGGGWNQVNYDPPWEGEYCETRDGTSQDREW--GAPNVG-------EGWDQSTQ 3054
                 +  GG  + N    W   +     GT +  EW  G  N G       EG   + Q
Sbjct: 868  WSDGWNNNGGTKEKN---EWSDGWNSNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQ 924

Query: 3055 VIRDTPWEGDGEPGGELSQEQGL---------GKPSQEECYVPSKDVEPGE-----AKFE 3192
              ++  W   GE     ++E+ +         GK  +EEC    KD   GE      KFE
Sbjct: 925  DPQEAEWNDSGEVKNGGTKEKDVRSDGWNNNGGKNEKEECCDGWKDGGSGEEIKNGGKFE 984

Query: 3193 P------DETSEWSDGW 3225
                    E  EWSDGW
Sbjct: 985  TRGDFVGKEEDEWSDGW 1001


>ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thaliana]
            gi|50401594|sp|Q8GYD9.1|SDE3_ARATH RecName: Full=Probable
            RNA helicase SDE3; AltName: Full=Silencing defective
            protein 3 gi|26450472|dbj|BAC42350.1| unknown protein
            [Arabidopsis thaliana] gi|332189722|gb|AEE27843.1|
            putative RNA helicase SDE3 [Arabidopsis thaliana]
          Length = 1002

 Score = 1037 bits (2681), Expect = 0.0
 Identities = 547/1037 (52%), Positives = 710/1037 (68%), Gaps = 31/1037 (2%)
 Frame = +1

Query: 208  MGGSIYDCGEERSFISDKGDIGFIDFDNDMSNCNYDVSTEGPVKISIPFPLVDNKPQSGY 387
            M  S Y   +E S I+DKG+IGFID+ ND S+  Y+   EGPV +S+PFP    KPQS  
Sbjct: 1    MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVT 60

Query: 388  VGDTIVDKITILNTTSNSVELYRAEIYDSKPEKSFTLSLMEPPSECSDVEYIQQYMETFS 567
            VG+T  D  T+ NT    V+L+  +IY S PE SFTLS+++PPS+ SD++  Q + ETF+
Sbjct: 61   VGETSFDSFTVKNTMDEPVDLW-TKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFT 119

Query: 568  LEDRVLQPGKPLTIWLSCKPKELGLHTAAVHLTTEDDTIERLVFVLAVDKVAVSLAGNKT 747
            LEDR+L+PG  LTIW+SCKPK++GLHT  V +    D +ER+VF+LA DK++ SL  N+ 
Sbjct: 120  LEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRP 179

Query: 748  FRREKKKKQWPNLVTNEFVPGSRPPRASIQYFKNKLRVYPIPDDVRDILEQKQIPELIQE 927
            + R ++  +  +   +++V GSRP +   + F+N+L +Y IP ++R+++E K+ P+ + E
Sbjct: 180  YSRSRRAPK-KDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNE 238

Query: 928  GLTKENYTSYFKHLVIMEEIKMEDDMRGYDMVHVSMKSKGSRFLTLEVPGLAEKRPSLVY 1107
            GLT  NY +Y+K L+IMEE+++E+DMR YDM +VSMK +G  +L+LEVPGLAE+RPSLV+
Sbjct: 239  GLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGI-YLSLEVPGLAERRPSLVH 297

Query: 1108 GDSIFARLASDDEYDSSRTYQGFIHRVEAEVVFLNFEQGFHSCFRASNLYNVQFTYNRLN 1287
            GD IF R A DD  D +  YQGF+HRVEA+ V + F   FH    A ++YNV+FTYNR+N
Sbjct: 298  GDFIFVRHAYDDGTDHA--YQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRIN 355

Query: 1288 MRRLYQAIEASQCLEAEFLFPVDSLRSRVIQTNPLVPISPVLNEEQESAVQMILGCKGGA 1467
             RRLYQA++A++ L+  FLFP      R+I+T P VPISP LN EQ  +++M+LGCKG  
Sbjct: 356  TRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAP 415

Query: 1468 PYVIYGPPGTGKTMTVIEAILQLYRTQKSARILVCAPSNSAADHILEKILGQKAVRIQNK 1647
            PYVI+GPPGTGKTMT++EAI+QLY TQ++AR+LVCAPSNSAADHILEK+L  + VRI++ 
Sbjct: 416  PYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDN 475

Query: 1648 DILRLNALTRPLEDFKPDYFKFSYYDEAERLFKCPPLMTLRRYKIVISTYASSSLLYAEG 1827
            +I RLNA TR  E+ KP+  +F ++DE   +FKCPPL  L RYK+V+STY S+SLL AEG
Sbjct: 476  EIFRLNAATRSYEEIKPEIIRFCFFDEL--IFKCPPLKALTRYKLVVSTYMSASLLNAEG 533

Query: 1828 IKRDHFSHIFLDEAGQASEPETMVPLANLCTRKTVVVLAGDPKQLGPVIYSKDAEKYGLG 2007
            + R HF+HI LDEAGQASEPE M+ ++NLC  +TVVVLAGDP+QLGPVIYS+DAE  GLG
Sbjct: 534  VNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLG 593

Query: 2008 KSYLERLFEFKFYDQSDQNYVIKLVKNYRCHPAILHLPSSLFYQGELIACKDDETRFSAA 2187
            KSYLERLFE  +Y + D+NYV KLVKNYRCHP IL LPS LFY GEL+A K+D T    A
Sbjct: 594  KSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKED-TDSVLA 652

Query: 2188 SEDLLPNKDFPVLFFGIQGFDEREGSNPSWFNRIEASKTVEIIRNLTETKGLSDEDIGVI 2367
            S + LPNK+FP++F+GIQG DEREG+NPSWFNRIE SK +E I+ LT    + +EDIGVI
Sbjct: 653  SLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVI 712

Query: 2368 APYRQQVLKIKKALEDIDLSNIQVGSVEQFQGQERQVIIVSTVRSTIKHNDFDITHCLGF 2547
             PYRQQV+KIK+ L+ +D++ ++VGSVEQFQGQE+QVII+STVRSTIKHN+FD  +CLGF
Sbjct: 713  TPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGF 772

Query: 2548 LSNPRRFNVAITRARSLLIVIGNPHIVCKDPYWNKLLWHCVDNGSYKGCFLPEREXXXXX 2727
            LSNPRRFNVAITRA SLL++IGNPHI+CKD  WNKLLW CVDN +Y+GC LPE+E     
Sbjct: 773  LSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQE----- 827

Query: 2728 XXXXXXXVNEPWQGECSELGKQEGFGELSQENEWEESSQA--GGWNQDNCDPPWEGENCE 2901
                   V EP++ E S  G Q        E EW  S +   GG N          EN E
Sbjct: 828  -----EFVEEPFKQEGSSNGPQ-----YPPEAEWNNSGELNNGGAN----------ENGE 867

Query: 2902 ARGETSQGGGWNQVNYDPPWEGEYCETRDGTSQDREW--GAPNVG-------EGWDQSTQ 3054
                 +  GG  + N    W   +     GT +  EW  G  N G       EG   + Q
Sbjct: 868  WSDGWNNNGGTKEKN---EWSDGWNSNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQ 924

Query: 3055 VIRDTPWEGDGEPGGELSQEQGL---------GKPSQEECYVPSKDVEPGE-----AKFE 3192
              ++  W   GE     ++E+ +         GK  +EEC    KD   GE      KFE
Sbjct: 925  DPQEAEWNDSGEVKNGGTKEKDVRSDGWNNNGGKNEKEECCDGWKDGGSGEEIKNGGKFE 984

Query: 3193 ------PDETSEWSDGW 3225
                    E  EWSDGW
Sbjct: 985  TRGDFVAKEEDEWSDGW 1001