BLASTX nr result

ID: Angelica22_contig00009910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009910
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CBI28420.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   165   4e-39
ref|XP_002299553.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  193 bits (490), Expect = 1e-47
 Identities = 102/163 (62%), Positives = 121/163 (74%)
 Frame = +2

Query: 26  MFQLVASNPLQLNTPHNLDLNLSKISKTPQEVTQLHALSIKTAALNNPLVFSRILSLYAD 205
           M     S+ LQ   P NL   L     T +E  QLHALSIKTA+LN+P V SR+L+LYAD
Sbjct: 1   MLSPTLSHSLQPFLPPNLHFPLQNCG-TEREANQLHALSIKTASLNHPSVSSRLLALYAD 59

Query: 206 PKINNLDYARSVFDYIEEPNLFSWNTIIKCYVENHRSDDALHLFDKMLSGSDCVPDDFTL 385
           P+INNL YA S+FD+I+EP L SWN +IKCY+EN RS+DA+ LF K+L   D VPD FTL
Sbjct: 60  PRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL--CDFVPDSFTL 117

Query: 386 PIVLKGCGRLCAFKEGEQIHGLVLKIGFGLDMFVQSSLVSLYS 514
           P VLKGC RL A +EG+QIHGLVLKIGFG+D FV SSLVS+YS
Sbjct: 118 PCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYS 160


>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/163 (57%), Positives = 119/163 (73%)
 Frame = +2

Query: 26  MFQLVASNPLQLNTPHNLDLNLSKISKTPQEVTQLHALSIKTAALNNPLVFSRILSLYAD 205
           M +L   + LQ   PHNL L+L +    PQEV QLHA S+KTA  N+P V SR+L+LY+D
Sbjct: 1   MLKLTPFHSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSD 60

Query: 206 PKINNLDYARSVFDYIEEPNLFSWNTIIKCYVENHRSDDALHLFDKMLSGSDCVPDDFTL 385
           PKIN+L YARS+FD I+  +L  WNTIIKCYVEN  S D + LF +++   + +PD+FTL
Sbjct: 61  PKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV--HEYLPDNFTL 118

Query: 386 PIVLKGCGRLCAFKEGEQIHGLVLKIGFGLDMFVQSSLVSLYS 514
           P V+KGC RL   +EG+QIHGL LKIGFG D+FVQ SLV++YS
Sbjct: 119 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYS 161


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/135 (61%), Positives = 105/135 (77%)
 Frame = +2

Query: 110 PQEVTQLHALSIKTAALNNPLVFSRILSLYADPKINNLDYARSVFDYIEEPNLFSWNTII 289
           PQEV QLHA S+KTA  N+P V SR+L+LY+DPKIN+L YARS+FD I+  +L  WNTII
Sbjct: 26  PQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTII 85

Query: 290 KCYVENHRSDDALHLFDKMLSGSDCVPDDFTLPIVLKGCGRLCAFKEGEQIHGLVLKIGF 469
           KCYVEN  S D + LF +++   + +PD+FTLP V+KGC RL   +EG+QIHGL LKIGF
Sbjct: 86  KCYVENQFSHDGIVLFHELV--HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGF 143

Query: 470 GLDMFVQSSLVSLYS 514
           G D+FVQ SLV++YS
Sbjct: 144 GSDVFVQGSLVNMYS 158


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/147 (56%), Positives = 110/147 (74%)
 Frame = +2

Query: 74  NLDLNLSKISKTPQEVTQLHALSIKTAALNNPLVFSRILSLYADPKINNLDYARSVFDYI 253
           +L  +L K SKT +E  QLHALS+KT   ++P + S +LSLYA+PKINNL+Y  S+F+ I
Sbjct: 9   SLHFSLLKTSKTDKETKQLHALSVKTNTFSHPSISSCLLSLYAEPKINNLEYVLSIFNKI 68

Query: 254 EEPNLFSWNTIIKCYVENHRSDDALHLFDKMLSGSDCVPDDFTLPIVLKGCGRLCAFKEG 433
           +EP L  +N +IKCY++N  S DA+ LF ++L   +  PD FTLP V+KGC RL A KEG
Sbjct: 69  QEPALVLYNILIKCYIQNQLSHDAITLFSQLL--HEFNPDGFTLPCVIKGCARLHATKEG 126

Query: 434 EQIHGLVLKIGFGLDMFVQSSLVSLYS 514
           +QIHGLVLK+GFGL+ FV SSLV++YS
Sbjct: 127 KQIHGLVLKLGFGLNKFVSSSLVNMYS 153



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/102 (34%), Positives = 53/102 (51%)
 Frame = +2

Query: 209 KINNLDYARSVFDYIEEPNLFSWNTIIKCYVENHRSDDALHLFDKMLSGSDCVPDDFTLP 388
           K  +   A  +FD + E NL SWN+++  Y  N R  +AL LF  ML   D  P+  TL 
Sbjct: 247 KAGDFVLASELFDKMPEKNLISWNSMVAGYDLNERFKEALDLFLTMLE-RDFTPNHATLV 305

Query: 389 IVLKGCGRLCAFKEGEQIHGLVLKIGFGLDMFVQSSLVSLYS 514
                   L +   G+ +H  ++K GF LD  + +SL+++YS
Sbjct: 306 STFSAVSGLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYS 347


>ref|XP_002299553.1| predicted protein [Populus trichocarpa] gi|222846811|gb|EEE84358.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/144 (39%), Positives = 92/144 (63%)
 Frame = +2

Query: 83  LNLSKISKTPQEVTQLHALSIKTAALNNPLVFSRILSLYADPKINNLDYARSVFDYIEEP 262
           L+L +I K   E  QLHA   K   + NPL  +R+L   +  +  N++YA+S+F++ + P
Sbjct: 29  LSLLEICKFTTEFAQLHARLTKLGFIKNPLALTRLLCYSSISQYANINYAQSIFNFDKNP 88

Query: 263 NLFSWNTIIKCYVENHRSDDALHLFDKMLSGSDCVPDDFTLPIVLKGCGRLCAFKEGEQI 442
           N F++N +I+ Y +  + ++AL LF  ML  ++  P+  T P VLK C ++ A +EG+Q+
Sbjct: 89  NTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGPNKLTFPFVLKACSQVRAIEEGKQV 148

Query: 443 HGLVLKIGFGLDMFVQSSLVSLYS 514
           HGLV K G   D+FVQ+SL+++YS
Sbjct: 149 HGLVFKHGLSEDLFVQNSLINMYS 172


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