BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009608
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    83   3e-14
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    81   1e-13
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    76   3e-12
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    74   1e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    74   2e-11

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -3

Query: 216  FQVGSLPISYLGLPLITGKLHKRDCTPLVNKFCGRVELWTSRFLNFGGRLQLVKTILSGI 37
            F++G+LP+ YLGLPL+T ++ + D  PLV K   R+  WT+RFL+F GRLQL+K++LS I
Sbjct: 909  FELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSI 968

Query: 36   VGYWSLYLFLPK 1
              +W     LPK
Sbjct: 969  TNFWLSVFRLPK 980


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = -3

Query: 219 GFQVGSLPISYLGLPLITGKLHKRDCTPLVNKFCGRVELWTSRFLNFGGRLQLVKTILSG 40
           GF +G LP+ YLGLPL+ G+L   DC PL+ +   R+  W++R L+F GRLQLV+++L  
Sbjct: 28  GFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRS 87

Query: 39  IVGYWSLYLFLP 4
           +  YW+    LP
Sbjct: 88  LQVYWASVFMLP 99


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = -3

Query: 216 FQVGSLPISYLGLPLITGKLHKRDCTPLVNKFCGRVELWTSRFLNFGGRLQLVKTILSGI 37
           F VG LP+ YLGLPL++ +L   DC PL+ +   ++E WTSRFL+F GRL L+ + L  I
Sbjct: 650 FDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSI 709

Query: 36  VGYWSLYLFLPK 1
             +W     LP+
Sbjct: 710 CNFWMAAFRLPR 721


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = -3

Query: 219 GFQVGSLPISYLGLPLITGKLHKRDCTPLVNKFCGRVELWTSRFLNFGGRLQLVKTILSG 40
           GF++GSLP+ YLGLPL++ KL   +  PL+ K   R   W  R L+F GR+QL+ +++SG
Sbjct: 651 GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISG 710

Query: 39  IVGYWSLYLFLP 4
           IV +W     LP
Sbjct: 711 IVNFWISSFILP 722


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/72 (44%), Positives = 48/72 (66%)
 Frame = -3

Query: 216 FQVGSLPISYLGLPLITGKLHKRDCTPLVNKFCGRVELWTSRFLNFGGRLQLVKTILSGI 37
           F VG LP+ YLGLPL+T +L   D +PL+++   R+ +WTSR+L+F GRL L+ ++L  I
Sbjct: 483 FGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSI 542

Query: 36  VGYWSLYLFLPK 1
             +W     LP+
Sbjct: 543 TNFWMNAFRLPR 554