BLASTX nr result

ID: Angelica22_contig00009357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009357
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   258   9e-67
ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...   256   3e-66
ref|XP_002509464.1| eukaryotic translation initiation factor 3 s...   248   9e-64
ref|XP_002305792.1| predicted protein [Populus trichocarpa] gi|2...   242   9e-62
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...   238   2e-60

>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Vitis vinifera]
          Length = 567

 Score =  258 bits (660), Expect = 9e-67
 Identities = 143/245 (58%), Positives = 153/245 (62%), Gaps = 5/245 (2%)
 Frame = +3

Query: 135 GFEIAAVPYNPDGWGPLDSSSNGAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXXX 314
           GFE+ AVP+NPDGWGP +S+S    LPNHP NVPFAPFSRSDKLGRIAD+T         
Sbjct: 4   GFEVGAVPFNPDGWGPPESASPH--LPNHPINVPFAPFSRSDKLGRIADWTRTYNNPSRN 61

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXX-----RLVDXXXXXXXXXXXXXXXNQNYHNNRNQL 479
                                         RLVD                Q     + QL
Sbjct: 62  PLRNPSDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQ-----QRQL 116

Query: 480 PQXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQIP 659
           PQ                      LYNLNRSGGNN RREAAVFKSSVDIQPEWNMLDQIP
Sbjct: 117 PQRRDEEVEARKREAEKERARRDRLYNLNRSGGNNQRREAAVFKSSVDIQPEWNMLDQIP 176

Query: 660 FSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRISPKNERRLERFKNRNFFKVTTTDDPVI 839
           FSTFSKLSFSVPEPEDLL+CG LEFYDR+YDR++PKNERRLERFKNRNFFKVTTTDDPVI
Sbjct: 177 FSTFSKLSFSVPEPEDLLLCGALEFYDRSYDRVTPKNERRLERFKNRNFFKVTTTDDPVI 236

Query: 840 RRLAN 854
           RRLAN
Sbjct: 237 RRLAN 241


>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Cucumis sativus]
           gi|449506762|ref|XP_004162841.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like [Cucumis
           sativus]
          Length = 566

 Score =  256 bits (655), Expect = 3e-66
 Identities = 142/241 (58%), Positives = 149/241 (61%), Gaps = 1/241 (0%)
 Frame = +3

Query: 135 GFEIAAVPYNPDGWGPLDSSSNGAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXXX 314
           GFE+ AVPYNPDGWGP DS++      N P NVPFAPFSRSDKLGRIAD+T         
Sbjct: 4   GFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRP 63

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXX-RLVDXXXXXXXXXXXXXXXNQNYHNNRNQLPQXX 491
                                     RLVD               NQ     R QLPQ  
Sbjct: 64  KTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQ----RTQLPQRR 119

Query: 492 XXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQIPFSTF 671
                               LYNLNRS  N PRREAAVFKSSV+IQPEWNMLDQIPFSTF
Sbjct: 120 DEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTF 179

Query: 672 SKLSFSVPEPEDLLMCGGLEFYDRTYDRISPKNERRLERFKNRNFFKVTTTDDPVIRRLA 851
           SKLSFSVPEPEDLL+CGGLEFYDR YDRI+PKNERRLERFKNRNFFKVTTTDDPVIRRLA
Sbjct: 180 SKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLA 239

Query: 852 N 854
           N
Sbjct: 240 N 240


>ref|XP_002509464.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223549363|gb|EEF50851.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 574

 Score =  248 bits (634), Expect = 9e-64
 Identities = 140/252 (55%), Positives = 151/252 (59%), Gaps = 10/252 (3%)
 Frame = +3

Query: 129 MVGFEIAAVPYNPDGWGPLDSSSNGAVLPNH--PTNVPFAPFSRSDKLGRIADFTXXXXX 302
           MVGFE+  VP+NPDGWGP D++   A       P NVPFAPFSRSDKLGRIAD+T     
Sbjct: 1   MVGFEVGFVPFNPDGWGPPDAAFASAATTTSTLPLNVPFAPFSRSDKLGRIADWTRNINP 60

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------RLVDXXXXXXXXXXXXXXXNQNY 458
                                                RLVD               NQ+ 
Sbjct: 61  NANRPNSKQNASDSVFDFTADDSFPAATAAGDDDSTFRLVDGKPPPRPKFGPKWRFNQH- 119

Query: 459 HNNRNQLPQXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEW 638
              R QLPQ                      LYN+NRS  N PRREAAVFKSSVDIQPEW
Sbjct: 120 ---RQQLPQRRDEEVEARKREAEKERARRDRLYNMNRSNQNQPRREAAVFKSSVDIQPEW 176

Query: 639 NMLDQIPFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRISPKNERRLERFKNRNFFKVT 818
           NMLDQIPFSTFSKLSFSVPEPEDLL+CGGLEFYDR++DRI+PKNERRLERFKNRNFFKVT
Sbjct: 177 NMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRSFDRITPKNERRLERFKNRNFFKVT 236

Query: 819 TTDDPVIRRLAN 854
           TTDDPVIRRLAN
Sbjct: 237 TTDDPVIRRLAN 248


>ref|XP_002305792.1| predicted protein [Populus trichocarpa] gi|222848756|gb|EEE86303.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  242 bits (617), Expect = 9e-62
 Identities = 133/246 (54%), Positives = 147/246 (59%), Gaps = 6/246 (2%)
 Frame = +3

Query: 135 GFEIAAVPYNPDGWGPLDSSSNGAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXXX 314
           GFE+ AVP+NPDGWGP D++         P NVPFAPFSRS+KLGRIADFT         
Sbjct: 4   GFEVGAVPFNPDGWGPPDATVTATTTSTLPLNVPFAPFSRSEKLGRIADFTRNLNQGQGG 63

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXX------RLVDXXXXXXXXXXXXXXXNQNYHNNRNQ 476
                                          RLVD               NQ+   NR Q
Sbjct: 64  AGGRKNAASDSVFDFTADDSFPSAADNDSSFRLVDGKPPPRPKFGPKWRFNQH---NRPQ 120

Query: 477 LPQXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQI 656
           LPQ                       YN NRS  N PRREAAVFKSSV+IQPEWNMLDQI
Sbjct: 121 LPQRRDEEVEAKKREAEKERARRDRHYNQNRSNQNQPRREAAVFKSSVEIQPEWNMLDQI 180

Query: 657 PFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRISPKNERRLERFKNRNFFKVTTTDDPV 836
           PFSTF+KLSFSVPEPEDL++CGGLEFYD+++DRI+PK ERRLERFKNRNFFKVTTTDDPV
Sbjct: 181 PFSTFTKLSFSVPEPEDLILCGGLEFYDKSFDRITPKAERRLERFKNRNFFKVTTTDDPV 240

Query: 837 IRRLAN 854
           IRRLAN
Sbjct: 241 IRRLAN 246


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like isoform 1 [Glycine max]
           gi|356555340|ref|XP_003545991.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like isoform 2
           [Glycine max]
          Length = 565

 Score =  238 bits (606), Expect = 2e-60
 Identities = 132/240 (55%), Positives = 147/240 (61%), Gaps = 1/240 (0%)
 Frame = +3

Query: 138 FEIAAVPYNPDGWGPLDSSSNGAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXXXX 317
           F+I AVP+N DGWGP D++++G+   N P NVPFAPFSRSDKLGRIAD+T          
Sbjct: 5   FDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSK 64

Query: 318 XXXXXXXXXXXXXXXXXXXXXXXX-RLVDXXXXXXXXXXXXXXXNQNYHNNRNQLPQXXX 494
                                    RLVD                Q     + QLPQ   
Sbjct: 65  NPADAVFDFANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQ-----QRQLPQRRD 119

Query: 495 XXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQIPFSTFS 674
                              LY++NRS  N  RREAAVFKSSVDIQPEWNM DQIPFSTFS
Sbjct: 120 EEVEAKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFS 179

Query: 675 KLSFSVPEPEDLLMCGGLEFYDRTYDRISPKNERRLERFKNRNFFKVTTTDDPVIRRLAN 854
           KLSF+VPEPEDLL+CG LE+YDRTYDRI+PKNERRLERFKNRNFFKVTTTDDPVIRRLAN
Sbjct: 180 KLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLAN 239


Top