BLASTX nr result

ID: Angelica22_contig00009239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009239
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39777.3| unnamed protein product [Vitis vinifera]              317   5e-84
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   317   5e-84
ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-bindin...   310   6e-82
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   306   9e-81
emb|CBI18525.3| unnamed protein product [Vitis vinifera]              301   3e-79

>emb|CBI39777.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score =  317 bits (812), Expect = 5e-84
 Identities = 155/186 (83%), Positives = 166/186 (89%)
 Frame = -2

Query: 1443 KDTLYNAFTKHFGKYGEITDSVIMKDRHTGLPRGFGFITYADPCVVDKVIEDDHVFNGKQ 1264
            KDT Y  F KHFGKYG+ITDSVIMKDR+TG PRGFGFITYADP VVD+VIED HV NGKQ
Sbjct: 28   KDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQ 87

Query: 1263 VEIKRTIPKGAAQSKDFKTKKIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRS 1084
            VEIKRTIPKG+ QSKDFKTKKIFVGG+PSTV+ DE K+FFSKYG VVEHQII DHETNRS
Sbjct: 88   VEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRS 147

Query: 1083 RGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEIKKAEPKKASNQLPAPAYGSKPRARSFS 904
            RGFGF+IFD+EEVVDEM+SK NMIDMAGT+VEIKKAEPKKASN  PAPAYGS  RARSFS
Sbjct: 148  RGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFS 207

Query: 903  DEFGRF 886
            D FG F
Sbjct: 208  DGFGGF 213



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 47/79 (59%)
 Frame = -2

Query: 1203 KIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSK 1024
            KIF+GG+    +       F KYG++ +  I+ D  T + RGFGF+ + +  VVD ++  
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 1023 TNMIDMAGTKVEIKKAEPK 967
            T++I+  G +VEIK+  PK
Sbjct: 80   THVIN--GKQVEIKRTIPK 96


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  317 bits (812), Expect = 5e-84
 Identities = 155/186 (83%), Positives = 166/186 (89%)
 Frame = -2

Query: 1443 KDTLYNAFTKHFGKYGEITDSVIMKDRHTGLPRGFGFITYADPCVVDKVIEDDHVFNGKQ 1264
            KDT Y  F KHFGKYG+ITDSVIMKDR+TG PRGFGFITYADP VVD+VIED HV NGKQ
Sbjct: 28   KDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQ 87

Query: 1263 VEIKRTIPKGAAQSKDFKTKKIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRS 1084
            VEIKRTIPKG+ QSKDFKTKKIFVGG+PSTV+ DE K+FFSKYG VVEHQII DHETNRS
Sbjct: 88   VEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRS 147

Query: 1083 RGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEIKKAEPKKASNQLPAPAYGSKPRARSFS 904
            RGFGF+IFD+EEVVDEM+SK NMIDMAGT+VEIKKAEPKKASN  PAPAYGS  RARSFS
Sbjct: 148  RGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFS 207

Query: 903  DEFGRF 886
            D FG F
Sbjct: 208  DGFGGF 213



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/79 (36%), Positives = 47/79 (59%)
 Frame = -2

Query: 1203 KIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSK 1024
            KIF+GG+    +       F KYG++ +  I+ D  T + RGFGF+ + +  VVD ++  
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79

Query: 1023 TNMIDMAGTKVEIKKAEPK 967
            T++I+  G +VEIK+  PK
Sbjct: 80   THVIN--GKQVEIKRTIPK 96


>ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like [Cucumis
            sativus] gi|449496860|ref|XP_004160246.1| PREDICTED:
            nuclear polyadenylated RNA-binding protein 4-like
            [Cucumis sativus]
          Length = 347

 Score =  310 bits (794), Expect = 6e-82
 Identities = 150/186 (80%), Positives = 163/186 (87%)
 Frame = -2

Query: 1443 KDTLYNAFTKHFGKYGEITDSVIMKDRHTGLPRGFGFITYADPCVVDKVIEDDHVFNGKQ 1264
            KDT Y  F KHFG YGEITDSVIMKDR+TG PRGFGFITYADP VVDKVIED HV NGKQ
Sbjct: 28   KDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQ 87

Query: 1263 VEIKRTIPKGAAQSKDFKTKKIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRS 1084
            VEIKRTIPKG  QSKDFKTKKIFVGGIPSTV+ DE K FFSKYG +VEHQII DHETNRS
Sbjct: 88   VEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKYGKIVEHQIIRDHETNRS 147

Query: 1083 RGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEIKKAEPKKASNQLPAPAYGSKPRARSFS 904
            RGFGF++F+ EEVVDE+LSK NMIDM+GT+VEIKKAEPKK+SN LPAPAYGS  RAR+F+
Sbjct: 148  RGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPLPAPAYGSNSRARTFN 207

Query: 903  DEFGRF 886
            D FG +
Sbjct: 208  DGFGGY 213



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 47/79 (59%)
 Frame = -2

Query: 1203 KIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSK 1024
            KIF+GG+    +  +    F  YG + +  I+ D  T + RGFGF+ + +  VVD+++  
Sbjct: 20   KIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 1023 TNMIDMAGTKVEIKKAEPK 967
            T++I+  G +VEIK+  PK
Sbjct: 80   THVIN--GKQVEIKRTIPK 96


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538031|gb|EEF39644.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 348

 Score =  306 bits (784), Expect = 9e-81
 Identities = 149/186 (80%), Positives = 162/186 (87%)
 Frame = -2

Query: 1443 KDTLYNAFTKHFGKYGEITDSVIMKDRHTGLPRGFGFITYADPCVVDKVIEDDHVFNGKQ 1264
            KDT Y  F KHFG+YGEITDSVIMKDR+TG PRGFGFITYADP VVDKVIED HV +GKQ
Sbjct: 28   KDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHGKQ 87

Query: 1263 VEIKRTIPKGAAQSKDFKTKKIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRS 1084
            VEIKRTIPKG+ QSKDFKTKKIFVGGIPS+V+ DE K FFSKYG VVEHQII DHETNRS
Sbjct: 88   VEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRS 147

Query: 1083 RGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEIKKAEPKKASNQLPAPAYGSKPRARSFS 904
            RGFGF+IFD+EE VDEMLS  NMIDMAGT+VEIKKAEPKKASN  PAP+YGS  R RS++
Sbjct: 148  RGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEPKKASNPPPAPSYGSNSRGRSYN 207

Query: 903  DEFGRF 886
            D +G F
Sbjct: 208  DSYGGF 213



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = -2

Query: 1203 KIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSK 1024
            KIF+GG+    +       F +YG + +  I+ D  T + RGFGF+ + +  VVD+++  
Sbjct: 20   KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79

Query: 1023 TNMIDMAGTKVEIKKAEPK 967
            T++I   G +VEIK+  PK
Sbjct: 80   THVIH--GKQVEIKRTIPK 96


>emb|CBI18525.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  301 bits (771), Expect = 3e-79
 Identities = 149/186 (80%), Positives = 161/186 (86%)
 Frame = -2

Query: 1443 KDTLYNAFTKHFGKYGEITDSVIMKDRHTGLPRGFGFITYADPCVVDKVIEDDHVFNGKQ 1264
            KDT Y AF KHF KYGEITDSVIMKDR+TG PRGFGF+TYADP VVD VIED HV NGKQ
Sbjct: 28   KDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQ 87

Query: 1263 VEIKRTIPKGAAQSKDFKTKKIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRS 1084
            VEIKRTIPKG+ QSKDFKTKKIFVGG+PSTV+ DE KDFFSKYG V EHQII DHETNRS
Sbjct: 88   VEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRS 147

Query: 1083 RGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEIKKAEPKKASNQLPAPAYGSKPRARSFS 904
            RGFGF+IF++EEVVDE+LS+ NMIDMAGT+VEIKKAEPKKASN     A+GS  RARSFS
Sbjct: 148  RGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPKKASNPPHVSAFGSNSRARSFS 207

Query: 903  DEFGRF 886
            D FG F
Sbjct: 208  DGFGGF 213



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/79 (37%), Positives = 46/79 (58%)
 Frame = -2

Query: 1203 KIFVGGIPSTVSADELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSK 1024
            KIF+GG+    +       F KYG + +  I+ D  T + RGFGFV + +  VVD ++  
Sbjct: 20   KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79

Query: 1023 TNMIDMAGTKVEIKKAEPK 967
            T++I+  G +VEIK+  PK
Sbjct: 80   THVIN--GKQVEIKRTIPK 96


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