BLASTX nr result

ID: Angelica22_contig00009087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00009087
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24213.3| unnamed protein product [Vitis vinifera]              219   4e-55
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...   219   4e-55
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...   210   2e-52
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   201   7e-50
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   197   1e-48

>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score =  219 bits (557), Expect = 4e-55
 Identities = 116/217 (53%), Positives = 139/217 (64%), Gaps = 2/217 (0%)
 Frame = +1

Query: 1   GEDLDEDVNIXXXXXXXXXXXXF-LRKSKGRQHGKGGLALKHARVLKSITSSSQRKRGGI 177
           GED DED N             + ++K KGR  G  G  LK  +  KS  +  +RKRG  
Sbjct: 66  GEDSDEDDNSNDDLDVSDEDDAYYMKKPKGRLRGNSGRGLKPTKEHKSFPAPGRRKRGRT 125

Query: 178 LLEDDESSARDSDNDSDEGFSGRTRRGANLRK-KNVVRATSTYVSSRGREIRTSSRSIRK 354
           LLED++S  +DS+NDSDE F   TRRGA+LRK K    +T+  +  R  E+RTSSRS+RK
Sbjct: 126 LLEDEDSYEKDSENDSDEDFKSMTRRGAHLRKSKGGQSSTTANIIGRNSELRTSSRSVRK 185

Query: 355 VSYVESEESEGHXXXXXXXXXXXXXXXXXXXXXXRVLWHQPRGMAEEALANNKSTEPVLL 534
           VSYVESEESE                        +VLWHQP+GMA+EAL NNKSTEP+LL
Sbjct: 186 VSYVESEESEEIDEGKKKKSQKEEIEEEDCDSIEKVLWHQPKGMADEALKNNKSTEPILL 245

Query: 535 SHLYDSEPDWNEMEFYIKWKGQSHLHCQWKSFFELQN 645
           SHL+D EP+WNEMEF IKWKGQSHLHCQWKSF +LQN
Sbjct: 246 SHLFDFEPNWNEMEFLIKWKGQSHLHCQWKSFSDLQN 282


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score =  219 bits (557), Expect = 4e-55
 Identities = 116/217 (53%), Positives = 139/217 (64%), Gaps = 2/217 (0%)
 Frame = +1

Query: 1   GEDLDEDVNIXXXXXXXXXXXXF-LRKSKGRQHGKGGLALKHARVLKSITSSSQRKRGGI 177
           GED DED N             + ++K KGR  G  G  LK  +  KS  +  +RKRG  
Sbjct: 263 GEDSDEDDNSNDDLDVSDEDDAYYMKKPKGRLRGNSGRGLKPTKEHKSFPAPGRRKRGRT 322

Query: 178 LLEDDESSARDSDNDSDEGFSGRTRRGANLRK-KNVVRATSTYVSSRGREIRTSSRSIRK 354
           LLED++S  +DS+NDSDE F   TRRGA+LRK K    +T+  +  R  E+RTSSRS+RK
Sbjct: 323 LLEDEDSYEKDSENDSDEDFKSMTRRGAHLRKSKGGQSSTTANIIGRNSELRTSSRSVRK 382

Query: 355 VSYVESEESEGHXXXXXXXXXXXXXXXXXXXXXXRVLWHQPRGMAEEALANNKSTEPVLL 534
           VSYVESEESE                        +VLWHQP+GMA+EAL NNKSTEP+LL
Sbjct: 383 VSYVESEESEEIDEGKKKKSQKEEIEEEDCDSIEKVLWHQPKGMADEALKNNKSTEPILL 442

Query: 535 SHLYDSEPDWNEMEFYIKWKGQSHLHCQWKSFFELQN 645
           SHL+D EP+WNEMEF IKWKGQSHLHCQWKSF +LQN
Sbjct: 443 SHLFDFEPNWNEMEFLIKWKGQSHLHCQWKSFSDLQN 479


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222849777|gb|EEE87324.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1748

 Score =  210 bits (534), Expect = 2e-52
 Identities = 112/217 (51%), Positives = 134/217 (61%), Gaps = 3/217 (1%)
 Frame = +1

Query: 4   EDLDEDVNIXXXXXXXXXXXX---FLRKSKGRQHGKGGLALKHARVLKSITSSSQRKRGG 174
           ED DE+VN                + +K KGRQ GKGG   K AR   S+ +S ++KRG 
Sbjct: 266 EDSDEEVNSDDWVISDDEDDDDSYYTKKPKGRQQGKGGCNTKSAREHTSLRASGRQKRGK 325

Query: 175 ILLEDDESSARDSDNDSDEGFSGRTRRGANLRKKNVVRATSTYVSSRGREIRTSSRSIRK 354
              E+DE SA DSD+D D  F   T+RG +LRK N     ST +  R  E+RTSSRS+RK
Sbjct: 326 TSFEEDEYSAEDSDSDKD--FKNMTQRGEHLRKSNARSTMSTNIGGRNNEVRTSSRSVRK 383

Query: 355 VSYVESEESEGHXXXXXXXXXXXXXXXXXXXXXXRVLWHQPRGMAEEALANNKSTEPVLL 534
           VSYVES+ESE                        RVLWHQPRG AE+A+ NN+STEPVLL
Sbjct: 384 VSYVESDESEEIGEGKKKNALKDEVEEEDGDSIERVLWHQPRGTAEDAMRNNRSTEPVLL 443

Query: 535 SHLYDSEPDWNEMEFYIKWKGQSHLHCQWKSFFELQN 645
           S+L+DS PDW EMEF IKWKGQSH+HCQWKSF +LQN
Sbjct: 444 SYLFDSVPDWKEMEFLIKWKGQSHMHCQWKSFSDLQN 480


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  201 bits (512), Expect = 7e-50
 Identities = 106/214 (49%), Positives = 132/214 (61%)
 Frame = +1

Query: 4   EDLDEDVNIXXXXXXXXXXXXFLRKSKGRQHGKGGLALKHARVLKSITSSSQRKRGGILL 183
           ED D D NI            + ++ KGRQ GK G  +K  R  K   +S +++R     
Sbjct: 286 EDDDSDANIVVSDDDEPF---YAKRPKGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSF 342

Query: 184 EDDESSARDSDNDSDEGFSGRTRRGANLRKKNVVRATSTYVSSRGREIRTSSRSIRKVSY 363
           ED+ES+  DSD+D DE F    +R  ++RK N   + +T  SSR  E+RTSSR++RKVSY
Sbjct: 343 EDNESTTEDSDSDGDEDFKSTKKRSVHVRKNNGRSSAATGFSSRNSEVRTSSRTVRKVSY 402

Query: 364 VESEESEGHXXXXXXXXXXXXXXXXXXXXXXRVLWHQPRGMAEEALANNKSTEPVLLSHL 543
           VESEESE                        +VLWHQP+GMAE+A  NN+STEPVL+SHL
Sbjct: 403 VESEESEEADEAKKKKSQKEEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHL 462

Query: 544 YDSEPDWNEMEFYIKWKGQSHLHCQWKSFFELQN 645
           +DSE DWNE+EF IKWKGQSHLHCQWKSF ELQN
Sbjct: 463 FDSEIDWNEIEFLIKWKGQSHLHCQWKSFAELQN 496


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 2083

 Score =  197 bits (502), Expect = 1e-48
 Identities = 105/216 (48%), Positives = 138/216 (63%), Gaps = 2/216 (0%)
 Frame = +1

Query: 4   EDLDEDVNIXXXXXXXXXXXXFLRKSKGRQHGKGGLALKHARVLKSITSSSQRKRGGILL 183
           +D DED+++            F +K+KGRQ GK G +++  R  K+ T+SS+++R     
Sbjct: 252 DDSDEDIDVSDNDDLY-----FDKKAKGRQRGKFGPSVRSTRDCKAFTASSRQRRVKSSF 306

Query: 184 EDDE--SSARDSDNDSDEGFSGRTRRGANLRKKNVVRATSTYVSSRGREIRTSSRSIRKV 357
           ED++  S+A DSD++SDE F    +RG  +RK N   + +T  S    E+R+SSR+IRKV
Sbjct: 307 EDEDENSTAEDSDSESDEDFKSLKKRGVRVRKNNGRSSAATSFSRPSNEVRSSSRTIRKV 366

Query: 358 SYVESEESEGHXXXXXXXXXXXXXXXXXXXXXXRVLWHQPRGMAEEALANNKSTEPVLLS 537
           SYVES+ESEG                       +VLWHQP+GMA EA  NN+S EPVL+S
Sbjct: 367 SYVESDESEG-ADEGTKKSQKEEIEVDDGDSVEKVLWHQPKGMAAEAQRNNQSMEPVLMS 425

Query: 538 HLYDSEPDWNEMEFYIKWKGQSHLHCQWKSFFELQN 645
           HL+DSEPDWN MEF IKWKGQSHLHCQWKSF +LQN
Sbjct: 426 HLFDSEPDWNNMEFLIKWKGQSHLHCQWKSFVDLQN 461


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