BLASTX nr result

ID: Angelica22_contig00008930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008930
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272768.1| PREDICTED: transcription elongation factor A...   409   e-111
ref|XP_004138392.1| PREDICTED: transcription elongation factor A...   396   e-108
ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_003523285.1| PREDICTED: putative transcription elongation...   372   e-100
gb|ACU19168.1| unknown [Glycine max]                                  369   1e-99

>ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
            vinifera]
          Length = 367

 Score =  409 bits (1050), Expect = e-111
 Identities = 213/401 (53%), Positives = 273/401 (68%), Gaps = 10/401 (2%)
 Frame = +2

Query: 47   MEAELIELYESXXXXXXXXXXXXVEESSPEEDRCVDALRQLKKFPVNYQLLVSTQVGKQL 226
            ME EL+EL+ES            V  + PE  RCVDAL+QLK FPV Y+ L STQVGK+L
Sbjct: 1    MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60

Query: 227  RHLTKHPRKKIQALASNLIGVWKNIIVEETTKSKKDGNL---------VSK-DSVKEETV 376
            RHLTKHP+ KIQ+LAS+L+ +WK ++++ET ++KK+G L         VSK ++VK E  
Sbjct: 61   RHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSAKAEVSKTETVKVEMA 119

Query: 377  HTSGGKKLPTVNSVKVEKVSKAVNVKLEKTNSSSSLVSETISKSETLSTAKKVENFDSVK 556
            H +GG        VKVEK SK   VK+EK +  SS    ++S+SET+   K+VEN D  K
Sbjct: 120  HKAGG--------VKVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVENVDERK 171

Query: 557  TEKSYSGNSSRVEKEITKEVTSDARKPRATVKPIATTVAPPKMSSVILCKDPSRDKVREL 736
               S                           KP   +  PPK++++I C D  RDKVREL
Sbjct: 172  QFSSVK-------------------------KPPQASNGPPKLTAMIKCNDALRDKVREL 206

Query: 737  LSEALLKVSGEVGEELREEADVSDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKD 916
            L+EAL KV+ E  E++++E +  DP RVAVS+ES M+EK G+SNG QKFKYRSIMFNIKD
Sbjct: 207  LAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKD 266

Query: 917  SQNPDFRRKILLGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGQRQASTDQ 1096
              NPD RRK+LLG VKPD+++ M+PEEMAS++RQR+N +IK+KALFDCERGG  +A+TDQ
Sbjct: 267  PNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQ 326

Query: 1097 FKCGRCKKNECTYYQMQTRSADEPMTTYVTCVNCDNRWKFC 1219
            FKCGRC + + TYYQ+QTRSADEPMTT+VTCVNC+N WKFC
Sbjct: 327  FKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 367


>ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like [Cucumis
            sativus]
          Length = 369

 Score =  396 bits (1018), Expect = e-108
 Identities = 213/399 (53%), Positives = 270/399 (67%), Gaps = 8/399 (2%)
 Frame = +2

Query: 47   MEAELIELYESXXXXXXXXXXXXVEESSPEEDRCVDALRQLKKFPVNYQLLVSTQVGKQL 226
            ME EL+EL+E+              +   EE RC+DALRQLKKFPV YQ+LVSTQVGK+L
Sbjct: 1    MENELVELFEAAKKAADAAAAPS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 59

Query: 227  RHLTKHPRKKIQALASNLIGVWKNIIVEETTKSKKDGNLVSKDSVKEETVHTSGGKKLPT 406
            RHLTKHP+KKIQ  AS+LI +WK I+++ET K+KK+GN  SKDS K  +         P+
Sbjct: 60   RHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGS---------PS 110

Query: 407  VNSVKVEKVSKAVNVKLEKTNSSSSLVSETISKSETLSTAKKVENFD------SVKTEKS 568
              SVKVEK  K+ ++K+E+ +                    KVE FD      SVK  KS
Sbjct: 111  AESVKVEKFQKSSSMKVERVS--------------------KVEQFDRNGATSSVKYSKS 150

Query: 569  YSGNSSR--VEKEITKEVTSDARKPRATVKPIATTVAPPKMSSVILCKDPSRDKVRELLS 742
             S  S R  V+ E T  +    R  +   KP +   APPK++S+I  KD +RDK+RELL 
Sbjct: 151  ESVVSERNSVKVEKTDSMVKVERVVKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLF 210

Query: 743  EALLKVSGEVGEELREEADVSDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKDSQ 922
            EA  KV GE  EE  +E + SDP RVAVS+ES M+E WG S GAQK KYRSIMFN+KD +
Sbjct: 211  EAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPK 270

Query: 923  NPDFRRKILLGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGQRQASTDQFK 1102
            NPDFRRK+LLG +KP++++ M+  +MASD+R+R+N+EI  KALFDCERGG  +A+TDQFK
Sbjct: 271  NPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFK 330

Query: 1103 CGRCKKNECTYYQMQTRSADEPMTTYVTCVNCDNRWKFC 1219
            CGRC + + TYYQ+QTRSADEPMTT+VTCVNC+N WKFC
Sbjct: 331  CGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 369


>ref|XP_002308256.1| predicted protein [Populus trichocarpa] gi|222854232|gb|EEE91779.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  390 bits (1003), Expect = e-106
 Identities = 203/391 (51%), Positives = 268/391 (68%)
 Frame = +2

Query: 47   MEAELIELYESXXXXXXXXXXXXVEESSPEEDRCVDALRQLKKFPVNYQLLVSTQVGKQL 226
            ME E +EL++             V  S PE  RCVD+L+QL+KF V  +LLVSTQVGK+L
Sbjct: 1    MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKL 60

Query: 227  RHLTKHPRKKIQALASNLIGVWKNIIVEETTKSKKDGNLVSKDSVKEETVHTSGGKKLPT 406
            R L KHP++KI+A+AS+L+ +WK ++++ET K  K+G++ SK SVK E            
Sbjct: 61   RPLAKHPKEKIRAVASDLLEMWKKMVIDETRK--KNGSIDSKSSVKAE------------ 106

Query: 407  VNSVKVEKVSKAVNVKLEKTNSSSSLVSETISKSETLSTAKKVENFDSVKTEKSYSGNSS 586
                    VSK+  VK+EK   +S +  E  S SET+    KVE  D  KT K       
Sbjct: 107  --------VSKSETVKVEKLRKTSVVKVERASTSETV----KVEKMDQDKTVK------- 147

Query: 587  RVEKEITKEVTSDARKPRATVKPIATTVAPPKMSSVILCKDPSRDKVRELLSEALLKVSG 766
             VEK   +E+ + + K     +P  + + PPK+ +++ C D  RDK+RELL+EAL KV+ 
Sbjct: 148  -VEKMSKQEIQTSSVK-----QPSQSPIGPPKLKTLVKCNDALRDKIRELLAEALSKVAS 201

Query: 767  EVGEELREEADVSDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKDSQNPDFRRKI 946
            E  E++R+E +  DP RVAVS+ES M+EK G+SNGAQK KYRSIMFNIKD  NPDFRRK+
Sbjct: 202  EADEDIRDEVEACDPIRVAVSVESMMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKV 261

Query: 947  LLGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGQRQASTDQFKCGRCKKNE 1126
            LLG V+P++++ M PEEMAS++R+R+N +IK+K LFDCER GQ QA+TDQFKCGRC++ +
Sbjct: 262  LLGEVQPERLVTMGPEEMASEQRKRENNQIKEKVLFDCERSGQAQATTDQFKCGRCRQRK 321

Query: 1127 CTYYQMQTRSADEPMTTYVTCVNCDNRWKFC 1219
            CTYYQMQTRSADEPMTTYVTCVNC+N WKFC
Sbjct: 322  CTYYQMQTRSADEPMTTYVTCVNCNNHWKFC 352


>ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
            [Glycine max]
          Length = 368

 Score =  372 bits (956), Expect = e-100
 Identities = 203/392 (51%), Positives = 272/392 (69%), Gaps = 1/392 (0%)
 Frame = +2

Query: 47   MEAELIELYESXXXXXXXXXXXXVEESSPEEDRCVDALRQLKKFPVNYQLLVSTQVGKQL 226
            ME EL+ELYE+              +   EE RC+DAL QLKKFPVNY++LV+TQVGK L
Sbjct: 1    MEKELVELYEAAKKAADAAISG---DGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHL 57

Query: 227  RHLTKHPRKKIQALASNLIGVWKNIIVEETTKSKKDGNLVSKDSVKEETVHTSGGKKLPT 406
            + LTKHPR KI+A A +LI +WK II++ET+K+K  G+    +S   E       +K P+
Sbjct: 58   KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117

Query: 407  VNSVKVEKVSKAVNVKLEKTNSSSSLVSETISKSETLSTAKKVENFDSVKTEKSYSGNSS 586
            V      KV K   VK+EK + + +    T S SE +   KKV+N   VK EK+    S 
Sbjct: 118  V------KVEKGETVKVEKIDRNGT----TKSSSENM---KKVQN--DVKNEKTDRSASV 162

Query: 587  RVEKEITKEVTSDARKPRATVKPIATT-VAPPKMSSVILCKDPSRDKVRELLSEALLKVS 763
            +VEK I KE      KP +  K ++++  APPK+ ++I   D +RDK+RE+L EAL KV+
Sbjct: 163  KVEK-IAKE-----EKPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVT 216

Query: 764  GEVGEELREEADVSDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKDSQNPDFRRK 943
            GE  E+L +  + SDP RVAV++ES ++EKWG SNGAQK KYRS+MFN+KDS NPDFRRK
Sbjct: 217  GEADEDLVDVVNNSDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRK 276

Query: 944  ILLGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGQRQASTDQFKCGRCKKN 1123
            +LLG ++P+Q++ M+  EMAS++R+++ ++I +KALF+CERGG  +A+TDQFKCGRC + 
Sbjct: 277  VLLGVIEPEQLINMSTAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQR 336

Query: 1124 ECTYYQMQTRSADEPMTTYVTCVNCDNRWKFC 1219
            + TYYQMQTRSADEPMTTYVTCV C+NRWKFC
Sbjct: 337  KTTYYQMQTRSADEPMTTYVTCVVCNNRWKFC 368


>gb|ACU19168.1| unknown [Glycine max]
          Length = 368

 Score =  369 bits (947), Expect = 1e-99
 Identities = 201/392 (51%), Positives = 271/392 (69%), Gaps = 1/392 (0%)
 Frame = +2

Query: 47   MEAELIELYESXXXXXXXXXXXXVEESSPEEDRCVDALRQLKKFPVNYQLLVSTQVGKQL 226
            ME EL+ELYE+              +   EE RC+DA  QLKKFPVNY++LV+TQVGK L
Sbjct: 1    MEKELVELYEAAKKAADAAISG---DGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHL 57

Query: 227  RHLTKHPRKKIQALASNLIGVWKNIIVEETTKSKKDGNLVSKDSVKEETVHTSGGKKLPT 406
            + LTKHPR KI+A A +LI +WK II++ET+K+K  G+    +S   E       +K P+
Sbjct: 58   KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117

Query: 407  VNSVKVEKVSKAVNVKLEKTNSSSSLVSETISKSETLSTAKKVENFDSVKTEKSYSGNSS 586
            V      KV K   VK+EK + + +    T S SE +   KKV+N   VK EK+    S 
Sbjct: 118  V------KVEKGETVKVEKIDRNGT----TKSSSENM---KKVQN--DVKNEKTDRSASV 162

Query: 587  RVEKEITKEVTSDARKPRATVKPIATT-VAPPKMSSVILCKDPSRDKVRELLSEALLKVS 763
            +VEK I KE      KP +  K ++++  APPK+ ++I   D +RDK+RE+L EAL KV+
Sbjct: 163  KVEK-IAKE-----EKPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVT 216

Query: 764  GEVGEELREEADVSDPYRVAVSLESAMYEKWGKSNGAQKFKYRSIMFNIKDSQNPDFRRK 943
            GE  E+L +  + SDP RVAV++ES ++EKWG SNGAQK KYRS+MFN+KDS NPDFRRK
Sbjct: 217  GEADEDLVDVVNNSDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRK 276

Query: 944  ILLGHVKPDQVLLMTPEEMASDERQRQNKEIKDKALFDCERGGQRQASTDQFKCGRCKKN 1123
            +LLG ++P+Q++ M+  EMAS++R+++ ++I +KALF+CERGG  +A+TDQFKCGRC + 
Sbjct: 277  VLLGVIEPEQLINMSTAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQR 336

Query: 1124 ECTYYQMQTRSADEPMTTYVTCVNCDNRWKFC 1219
            + TYYQMQTRSADEPMTT+VTCV C+NRWKFC
Sbjct: 337  KTTYYQMQTRSADEPMTTHVTCVVCNNRWKFC 368


Top