BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008891
         (1916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   642   0.0  
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   608   e-171
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   603   e-170
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   600   e-169

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  642 bits (1655), Expect = 0.0
 Identities = 310/398 (77%), Positives = 337/398 (84%), Gaps = 3/398 (0%)
 Frame = +3

Query: 90   GLEAWERAYADERSWESLQEDESGNLRPIDNKTIQHAQXXXXXXXXXXX---ARIQKGLI 260
            GL+AWERAYADERSWESLQEDESG LRPIDNKTI HAQ              ARIQKGLI
Sbjct: 96   GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 155

Query: 261  RFLYIVIDLSRAAGEMDFRPSRMVVVAKQVEAFIREFFDQNPLSQIGLITIKDGVAQCLT 440
            R+LYIV+DLSRAA EMDF+PSRM VVAK +EAFIREFFDQNPLSQIGL+TIKDG+AQCLT
Sbjct: 156  RYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLT 215

Query: 441  DLGGSPESHINALMGKLGCSGDASLQNALDLVHEYLSPIPSYGHREALILYSALSTCDPG 620
            DLGGSP+SH+ ALMGKL CSGD+SLQNALDLVH YL+ IPSYGHRE LILYSALSTCDPG
Sbjct: 216  DLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 275

Query: 621  DIMESIQRCKKAKIRCSIVGLSAEIFICKHICQETGGSYSVALDEAHLKELVLEHXXXXX 800
            DIME+IQ CKK+KIRCS++GLSAEIFIC+H+CQETGGSYSVALDE+H KEL+LEH     
Sbjct: 276  DIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPP 335

Query: 801  XXXXXXXSNLIKMGFPQRAGEGVCSICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 980
                   +NLIKMGFPQRA EGV SICSCHKEAK GGGYTCPRCKARVCELPTECRICGL
Sbjct: 336  AIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGL 395

Query: 981  TLVSSPHLARSYHHLFPITPFDDVPPSLPRNSHLLLPKSCFGCQQSLLGPANLPGPSVAC 1160
            TLVSSPHLARSYHHLFPI PFD+V  SL  N H    ++CFGCQ+SLL P N P   VAC
Sbjct: 396  TLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVAC 455

Query: 1161 PKCKQYFCLDCDIYIHESLHNCPGCESFKQSKLDRGTE 1274
            PKCKQ+FCLDCDIYIHESLHNCPGCESF+ SK+   TE
Sbjct: 456  PKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 493


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  642 bits (1655), Expect = 0.0
 Identities = 310/398 (77%), Positives = 337/398 (84%), Gaps = 3/398 (0%)
 Frame = +3

Query: 90   GLEAWERAYADERSWESLQEDESGNLRPIDNKTIQHAQXXXXXXXXXXX---ARIQKGLI 260
            GL+AWERAYADERSWESLQEDESG LRPIDNKTI HAQ              ARIQKGLI
Sbjct: 35   GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 94

Query: 261  RFLYIVIDLSRAAGEMDFRPSRMVVVAKQVEAFIREFFDQNPLSQIGLITIKDGVAQCLT 440
            R+LYIV+DLSRAA EMDF+PSRM VVAK +EAFIREFFDQNPLSQIGL+TIKDG+AQCLT
Sbjct: 95   RYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLT 154

Query: 441  DLGGSPESHINALMGKLGCSGDASLQNALDLVHEYLSPIPSYGHREALILYSALSTCDPG 620
            DLGGSP+SH+ ALMGKL CSGD+SLQNALDLVH YL+ IPSYGHRE LILYSALSTCDPG
Sbjct: 155  DLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 214

Query: 621  DIMESIQRCKKAKIRCSIVGLSAEIFICKHICQETGGSYSVALDEAHLKELVLEHXXXXX 800
            DIME+IQ CKK+KIRCS++GLSAEIFIC+H+CQETGGSYSVALDE+H KEL+LEH     
Sbjct: 215  DIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPP 274

Query: 801  XXXXXXXSNLIKMGFPQRAGEGVCSICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 980
                   +NLIKMGFPQRA EGV SICSCHKEAK GGGYTCPRCKARVCELPTECRICGL
Sbjct: 275  AIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGL 334

Query: 981  TLVSSPHLARSYHHLFPITPFDDVPPSLPRNSHLLLPKSCFGCQQSLLGPANLPGPSVAC 1160
            TLVSSPHLARSYHHLFPI PFD+V  SL  N H    ++CFGCQ+SLL P N P   VAC
Sbjct: 335  TLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVAC 394

Query: 1161 PKCKQYFCLDCDIYIHESLHNCPGCESFKQSKLDRGTE 1274
            PKCKQ+FCLDCDIYIHESLHNCPGCESF+ SK+   TE
Sbjct: 395  PKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 432


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  608 bits (1567), Expect = e-171
 Identities = 290/400 (72%), Positives = 326/400 (81%), Gaps = 5/400 (1%)
 Frame = +3

Query: 90   GLEAWERAYADERSWESLQEDESGNLRPIDNKTIQHAQXXXXXXXXXXXA---RIQKGLI 260
            GL AWER YAD+RSWE+LQEDESG LRPIDNK I HAQ           A   RIQKGLI
Sbjct: 24   GLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLI 83

Query: 261  RFLYIVIDLSRAAGEMDFRPSRMVVVAKQVEAFIREFFDQNPLSQIGLITIKDGVAQCLT 440
            R+LYIVID S+AA EMDFRPSRM VVAK V+AF+REFFDQNPLSQIGL+TIKDG A CLT
Sbjct: 84   RYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLT 143

Query: 441  DLGGSPESHINALMGKLGCSGDASLQNALDLVHEYLSPIPSYGHREALILYSALSTCDPG 620
            DLGGSPESH+ ALMGKL CSGDASLQN L+LVH YL+ IPSYGHRE L+LYSAL++CDPG
Sbjct: 144  DLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPG 203

Query: 621  DIMESIQRCKKAKIRCSIVGLSAEIFICKHICQETGGSYSVALDEAHLKELVLEHXXXXX 800
            DIME++Q+CK +KIRCS++GL+AEIFIC+H+CQETGGSYSVALDE+H KEL+LEH     
Sbjct: 204  DIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPP 263

Query: 801  XXXXXXXSNLIKMGFPQRAGEGVCSICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 980
                    NLIKMGFPQRA E   +ICSCHKEAK GGGYTCPRCKARVCELPTECRICGL
Sbjct: 264  AIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGL 323

Query: 981  TLVSSPHLARSYHHLFPITPFDDVPPSLPRNSHLLLPKSCFGCQQSLLGPA--NLPGPSV 1154
            TL+SSPHLARSYHHLFPI PFD+V   +  +    LPK CFGCQ+SL+ P+  N P   V
Sbjct: 324  TLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRV 383

Query: 1155 ACPKCKQYFCLDCDIYIHESLHNCPGCESFKQSKLDRGTE 1274
            +CPKCKQ+FCLDCDIYIHESLHNCPGCESF++ KL    E
Sbjct: 384  SCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLATSDE 423


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
            max]
          Length = 420

 Score =  603 bits (1554), Expect = e-170
 Identities = 283/392 (72%), Positives = 323/392 (82%), Gaps = 3/392 (0%)
 Frame = +3

Query: 90   GLEAWERAYADERSWESLQEDESGNLRPIDNKTIQHAQXXXXXXXXXXXA---RIQKGLI 260
            GLEAWER YA++RSWE+LQEDESG LRPID   I HAQ           A   RIQKGLI
Sbjct: 23   GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82

Query: 261  RFLYIVIDLSRAAGEMDFRPSRMVVVAKQVEAFIREFFDQNPLSQIGLITIKDGVAQCLT 440
            R+LYIV+DLS+AA E DFRPSRM V+ KQVEAFIREFFDQNPLS +GL+TIKDG+A C+T
Sbjct: 83   RYLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCIT 142

Query: 441  DLGGSPESHINALMGKLGCSGDASLQNALDLVHEYLSPIPSYGHREALILYSALSTCDPG 620
            +LGGSPESHI ALMGKL CSGDASLQNAL+LV  YL+ IPSYGHRE LILYSALSTCDPG
Sbjct: 143  ELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPG 202

Query: 621  DIMESIQRCKKAKIRCSIVGLSAEIFICKHICQETGGSYSVALDEAHLKELVLEHXXXXX 800
            D+ME+IQ+CKK+KIRCS++GL+AE+F+CKH+CQETGG+YSVALDE+H KEL+LEH     
Sbjct: 203  DLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPP 262

Query: 801  XXXXXXXSNLIKMGFPQRAGEGVCSICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 980
                   +NLIKMGFPQR+ EG  +IC+CH+EAK GGGYTCPRCK RVCELPTECR+CGL
Sbjct: 263  AIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 322

Query: 981  TLVSSPHLARSYHHLFPITPFDDVPPSLPRNSHLLLPKSCFGCQQSLLGPANLPGPSVAC 1160
            TL+SSPHLARSYHHLFPI  FD+V PS   +S+   P +CFGCQQSLL   N PG SV C
Sbjct: 323  TLISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVIC 382

Query: 1161 PKCKQYFCLDCDIYIHESLHNCPGCESFKQSK 1256
            PKCKQ FCLDCDIY+HESLHNCPGCES + SK
Sbjct: 383  PKCKQQFCLDCDIYVHESLHNCPGCESSRHSK 414


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355499974|gb|AES81177.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 426

 Score =  600 bits (1547), Expect = e-169
 Identities = 286/396 (72%), Positives = 322/396 (81%), Gaps = 7/396 (1%)
 Frame = +3

Query: 90   GLEAWERAYADERSWESLQEDESGNLRPIDNKTIQHAQXXXXXXXXXXXA---RIQKGLI 260
            GLEAWERAY ++RSWESLQEDESG LRPID   I HAQ           A   RIQKGLI
Sbjct: 25   GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLI 84

Query: 261  RFLYIVIDLSRAAGEMDFRPSRMVVVAKQVEAFIREFFDQNPLSQIGLITIKDGVAQCLT 440
            R+LYIV+DLS+AA E DFRPSRM V+AKQVE FIREFFDQNPLS +GL+T KDGVA CLT
Sbjct: 85   RYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLT 144

Query: 441  DLGGSPESHINALMGKLGCSGDASLQNALDLVHEYLSPIPSYGHREALILYSALSTCDPG 620
            DLGGSPESHI ALMGKL CSGDASLQNAL+LVH  L+ IPSYGHRE LILYSALSTCDPG
Sbjct: 145  DLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPG 204

Query: 621  DIMESIQRCKKAKIRCSIVGLSAEIFICKHICQETGGSYSVALDEAHLKELVLEHXXXXX 800
            D+ME+IQ+CKK+KIRCS++GL+AE+FICKH+CQETGG+YSVALDE+H KEL+LEH     
Sbjct: 205  DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPP 264

Query: 801  XXXXXXXSNLIKMGFPQRAGEGVCSICSCHKEAKFGGGYTCPRCKARVCELPTECRICGL 980
                   +NLIKMGFPQRA EG  +IC+CH+EAK GGGYTCPRCK RVCELPTECR+CGL
Sbjct: 265  AIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGL 324

Query: 981  TLVSSPHLARSYHHLFPITPFDDVPPSLPRNSHLLLPKSCFGCQQSLL----GPANLPGP 1148
            TL+SSPHLARSYHHLFPI PF ++ PS   + +   P +CFGCQQSLL    G  N    
Sbjct: 325  TLISSPHLARSYHHLFPIVPFAEISPSSQNDPNHSFPNTCFGCQQSLLSQGFGAGNKAEL 384

Query: 1149 SVACPKCKQYFCLDCDIYIHESLHNCPGCESFKQSK 1256
            SV+CPKCKQ FCLDCD+YIHESLHNCPGCESF+ SK
Sbjct: 385  SVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSK 420