BLASTX nr result

ID: Angelica22_contig00008775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008775
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   239   1e-61
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   237   7e-61
ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation spec...   237   7e-61
gb|AFK44906.1| unknown [Medicago truncatula]                          235   3e-60
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   232   2e-59

>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  239 bits (611), Expect = 1e-61
 Identities = 112/128 (87%), Positives = 121/128 (94%)
 Frame = -1

Query: 384 MVMSPAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKINYVKEGMRTSVEGILLVQEHS 205
           MV SP VNTYPLSSYTFG+KE K+EKDTSVADRLARMK+NY+KEGMRTSVE ILLVQEH 
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60

Query: 204 HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANSPNLQPNWQIGECVATWW 25
           HPHILLLQIGNTFCKLPGGRL+PGENEIEGLKRKL+SKL ANSP+LQP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120

Query: 24  RPNFETMM 1
           RPNFET+M
Sbjct: 121 RPNFETVM 128


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  237 bits (605), Expect = 7e-61
 Identities = 113/128 (88%), Positives = 121/128 (94%)
 Frame = -1

Query: 384 MVMSPAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKINYVKEGMRTSVEGILLVQEHS 205
           MV SP VNTYPLSSYTFG+KE K+EKDTSVADRLARMK+NY+KEGMRTSVE ILLVQEH+
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 204 HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANSPNLQPNWQIGECVATWW 25
           HPHILLLQIGNTFCKLPGGRL+PGENEIEGLKRKLSSKLAANS  LQP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120

Query: 24  RPNFETMM 1
           RPNFET+M
Sbjct: 121 RPNFETIM 128


>ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Vitis vinifera] gi|147788664|emb|CAN61008.1|
           hypothetical protein VITISV_016616 [Vitis vinifera]
           gi|302143896|emb|CBI22757.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  237 bits (605), Expect = 7e-61
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = -1

Query: 384 MVMSPAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKINYVKEGMRTSVEGILLVQEHS 205
           M+ SP VNTYPLSSYTFG+KE K+EKDTSVADRLARM++NY+KEGMRT+V+ ILLVQEH+
Sbjct: 1   MLTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHT 60

Query: 204 HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANSPNLQPNWQIGECVATWW 25
           HPHILLLQIGNTFCKLPGGRL+PGENEIEGLKRKLSSKLAANSP LQP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWW 120

Query: 24  RPNFETMM 1
           RPNFET+M
Sbjct: 121 RPNFETVM 128


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  235 bits (599), Expect = 3e-60
 Identities = 110/128 (85%), Positives = 120/128 (93%)
 Frame = -1

Query: 384 MVMSPAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKINYVKEGMRTSVEGILLVQEHS 205
           M+ S  VNTYPLSSYTFG+KE K+EKDTSVADRLARMK+NY+KEGMRTSVEGILLVQEH+
Sbjct: 1   MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 204 HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANSPNLQPNWQIGECVATWW 25
           HPHILLLQIGNTFCKLPGGRL+PGENEIEGLKRKL+SKL ANSP L P+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120

Query: 24  RPNFETMM 1
           RPNFET+M
Sbjct: 121 RPNFETIM 128


>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/128 (85%), Positives = 119/128 (92%)
 Frame = -1

Query: 384 MVMSPAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKINYVKEGMRTSVEGILLVQEHS 205
           MV S  VNTYPLSSYTFG+KE K+EKDTSVADRLARMK+NY+KEGMRTSVEGILLVQEH+
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 204 HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANSPNLQPNWQIGECVATWW 25
           HPHILLLQIGNTFCKLPGGRL+PGENE EGLKRKL+SKL ANSP L P+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 24  RPNFETMM 1
           RPNFET+M
Sbjct: 121 RPNFETIM 128


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