BLASTX nr result

ID: Angelica22_contig00008709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008709
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   228   8e-58
ref|XP_003578361.1| PREDICTED: 30S ribosomal protein S16-like [B...   217   2e-54
ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              216   5e-54
ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   215   9e-54

>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  228 bits (582), Expect = 8e-58
 Identities = 106/130 (81%), Positives = 118/130 (90%)
 Frame = -3

Query: 629 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 450
           LSRFGCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG
Sbjct: 7   LSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 66

Query: 449 AQPSDPVQRLLFRAGVLPPPPMLAMGHKGGPRNTRPIDPMTGRPLTAENPTNSDQPKDSN 270
           AQPSDPVQ++LFRAG+LPPPPM+AMG KGG R+TRP+DP+TGR LT   PT+ +QPKD  
Sbjct: 67  AQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDE 126

Query: 269 GDGGEDAAAT 240
            DG ED+ +T
Sbjct: 127 -DGNEDSPST 135


>ref|XP_003578361.1| PREDICTED: 30S ribosomal protein S16-like [Brachypodium distachyon]
          Length = 139

 Score =  217 bits (553), Expect = 2e-54
 Identities = 101/130 (77%), Positives = 109/130 (83%)
 Frame = -3

Query: 629 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 450
           L+RFGC+N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPG+DGGKRMGL FDRVKYWLSVG
Sbjct: 7   LARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVG 66

Query: 449 AQPSDPVQRLLFRAGVLPPPPMLAMGHKGGPRNTRPIDPMTGRPLTAENPTNSDQPKDSN 270
           AQPSDPVQR+LFRAGVLPPPP+LAMG KGGPR+  PI PMTGRPL  E  T  D P  + 
Sbjct: 67  AQPSDPVQRILFRAGVLPPPPLLAMGRKGGPRDRNPIHPMTGRPLNLEGVTIVDDPNATE 126

Query: 269 GDGGEDAAAT 240
           GD  E    T
Sbjct: 127 GDAEESTEPT 136


>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  217 bits (552), Expect = 2e-54
 Identities = 103/131 (78%), Positives = 113/131 (86%)
 Frame = -3

Query: 629 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 450
           LSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVG
Sbjct: 7   LSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVG 66

Query: 449 AQPSDPVQRLLFRAGVLPPPPMLAMGHKGGPRNTRPIDPMTGRPLTAENPTNSDQPKDSN 270
           AQPS+PVQR+LFRAGVLPPPPM+ MG KGGPR+TRP+DPMTGR L+ E   +S Q   S 
Sbjct: 67  AQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASK 126

Query: 269 GDGGEDAAATS 237
            D   +AA T+
Sbjct: 127 ND--TEAATTT 135


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  216 bits (549), Expect = 5e-54
 Identities = 102/131 (77%), Positives = 113/131 (86%)
 Frame = -3

Query: 629 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 450
           LSRFGC NKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVG
Sbjct: 7   LSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVG 66

Query: 449 AQPSDPVQRLLFRAGVLPPPPMLAMGHKGGPRNTRPIDPMTGRPLTAENPTNSDQPKDSN 270
           AQPS+PVQR+LFRAG+LPPPPM+ MG KGGPR+TRP+DPMTGR L+ E   +S Q   S 
Sbjct: 67  AQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASK 126

Query: 269 GDGGEDAAATS 237
            D   +AA T+
Sbjct: 127 ND--TEAATTT 135


>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  215 bits (547), Expect = 9e-54
 Identities = 103/126 (81%), Positives = 110/126 (87%)
 Frame = -3

Query: 629 LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVG 450
           LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDR+KYWLSVG
Sbjct: 7   LSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLKYWLSVG 66

Query: 449 AQPSDPVQRLLFRAGVLPPPPMLAMGHKGGPRNTRPIDPMTGRPLTAENPTNSDQPKDSN 270
           AQPSDPVQRLLFRAGVLPPPPMLAMG KGGPR+TR +DPMTGR  T E+  ++     S 
Sbjct: 67  AQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAVPTVGSE 126

Query: 269 GDGGED 252
            D  +D
Sbjct: 127 VDEDKD 132


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