BLASTX nr result
ID: Angelica22_contig00008660
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00008660
(1449 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy... 154 2e-47
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula] 137 5e-41
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 143 4e-39
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera] 142 1e-38
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ... 134 5e-38
>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
Length = 463
Score = 154 bits (390), Expect(2) = 2e-47
Identities = 86/260 (33%), Positives = 148/260 (56%), Gaps = 12/260 (4%)
Frame = -2
Query: 830 WERCND-----LITNLDENIAKSVLFFKTAREIWYDLEDRFGYASIAQIYALEQQLTELN 666
W RC+D L+ +L + IA+SVL+ +TA+E+W +LE R+G +++ L+++L ++
Sbjct: 96 WRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQRELNNVS 155
Query: 665 QGSKSVSEFFTEIKTLWDAMNDASPLPSCTCKHCTCNLTQKVYQREQDHRLIQFMMKLSD 486
QG+ V+ +F ++K +WD M + C+C+ C C + ++D +LIQF+M L++
Sbjct: 156 QGTNDVAAYFNKLKRIWDQMKVLNTFMVCSCE-CNCEAKGHNAKMQEDQQLIQFLMGLNE 214
Query: 485 RFSVVRGNILMQLPLPNISTAFRMFSQEERHQEIFQ-NNSNTESLAFLAGS------KKP 327
+S +RGNILM PLP+ + A+ + S EE + I NN +T+S AF A + +
Sbjct: 215 VYSGIRGNILMMKPLPSTAQAYSIISHEETQRGIAAGNNVSTDSAAFNASTQNWNNQRNN 274
Query: 326 YDNKDAGNNVQRQVANTSGY*ANKSNDGSKKVSKFYCTHCKMSGHSLERCIKVHGYPLGF 147
YDN+ N + N G +N++N YCT+C+ SGH E C K++G
Sbjct: 275 YDNRARNQNYNNRRNNYEGRRSNQNNS--------YCTYCRTSGHVREECRKLNG----- 321
Query: 146 KNNKDKKVAALSNANLDQNS 87
++N++++ A N N N+
Sbjct: 322 RDNRNRRPA--GNPNTQANA 339
Score = 62.4 bits (150), Expect(2) = 2e-47
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -1
Query: 1044 DVNGVYYIHPSNASSSQLVTVKFNGVGFANWKRAMVLSLSAKNKLGFVDGSVTKP 880
D+N YY+ S+A L+ F+G + NWKR +++SLSAKNKLGF+ G+ KP
Sbjct: 32 DINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKP 86
>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
Length = 1157
Score = 137 bits (344), Expect(2) = 5e-41
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 8/261 (3%)
Frame = -2
Query: 845 LDAKAWERCNDLI-----TNLDENIAKSVLFFKTAREIWYDLEDRFGYASIAQIYALEQQ 681
L+ +AWERCN LI ++ E+IA++++F TA W DL++ F ++ +L
Sbjct: 69 LNRQAWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRST 128
Query: 680 LTELNQGSKSVSEFFTEIKTLWDAMNDASPLPSCTCKH-CTCNLTQKVYQREQDHRLIQF 504
+ L QG+KSV ++F E+ TLWD +N P+P+CTC H C C + + +++QF
Sbjct: 129 INNLKQGTKSVLDYFIELCTLWDELNSHRPIPNCTCIHPCRCESIRLAKYYRTEDQILQF 188
Query: 503 MMKLSDRFSVVRGNILMQLPLPNISTAFRMFSQEERHQEIFQ--NNSNTESLAFLAGSKK 330
+ L+D FSVV+ IL+ PLP I+ + + QEE +F + S+ S++ A +
Sbjct: 189 LTGLNDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDDSSISVNASDAR 248
Query: 329 PYDNKDAGNNVQRQVANTSGY*ANKSNDGSKKVSKFYCTHCKMSGHSLERCIKVHGYPLG 150
+ + G TS ANK D +CT C H++E C +G+P
Sbjct: 249 KFYPRGKG---------TSSTSANKGKDR-------FCTFCNRYNHTIEFCYLKYGHP-N 291
Query: 149 FKNNKDKKVAALSNANLDQNS 87
F A+S A+ NS
Sbjct: 292 FNKGNSSANNAVSEASDTNNS 312
Score = 58.9 bits (141), Expect(2) = 5e-41
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -1
Query: 1029 YYIHPSNASSSQLVTVKFNGVGFANWKRAMVLSLSAKNKLGFVDGSVTKP 880
YYIHPS+ SS ++T K NG + W R+M +L AKNKL F+DGS++ P
Sbjct: 15 YYIHPSDGPSSLIITPKLNGSNYLAWHRSMQRALGAKNKLVFLDGSISVP 64
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 143 bits (361), Expect(2) = 4e-39
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 5/238 (2%)
Frame = -2
Query: 842 DAKAWERCNDLIT-----NLDENIAKSVLFFKTAREIWYDLEDRFGYASIAQIYALEQQL 678
D AW RCND+++ ++D+ I +S+L+ T + IW +L RF +I+ +EQ+L
Sbjct: 90 DFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKL 149
Query: 677 TELNQGSKSVSEFFTEIKTLWDAMNDASPLPSCTCKHCTCNLTQKVYQREQDHRLIQFMM 498
+++ QGS +S ++T + TLW+ + LP CTC C C+ K +Q R+ +F+
Sbjct: 150 SKIEQGSMDISTYYTALLTLWEEHRNYVELPVCTCGRCECDAAVKWEHLQQRSRVTKFLK 209
Query: 497 KLSDRFSVVRGNILMQLPLPNISTAFRMFSQEERHQEIFQNNSNTESLAFLAGSKKPYDN 318
+L++ F R +ILM P+P I AF M +Q+ER + + + + +S+AF S D
Sbjct: 210 ELNEGFDQTRRHILMLKPIPTIKEAFNMVTQDERQRNV-KPLTRVDSVAFQNTSMINEDE 268
Query: 317 KDAGNNVQRQVANTSGY*ANKSNDGSKKVSKFYCTHCKMSGHSLERCIKVHGYPLGFK 144
A + Y + N K CTHC GH++++C KVHGYP G K
Sbjct: 269 N----------AYVAAYNTVRPN------QKPICTHCGKVGHTIQKCYKVHGYPPGMK 310
Score = 45.8 bits (107), Expect(2) = 4e-39
Identities = 18/51 (35%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = -1
Query: 1029 YYIHPSNASSSQLVTVKFNGVG-FANWKRAMVLSLSAKNKLGFVDGSVTKP 880
YY+H ++ + LV+ + F +W+R+++++L+ +NKLGF++G++TKP
Sbjct: 34 YYLHSADHAGLILVSDRLTTASDFHSWRRSILMALNVRNKLGFINGTITKP 84
>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
Length = 334
Score = 142 bits (359), Expect(2) = 1e-38
Identities = 72/235 (30%), Positives = 130/235 (55%), Gaps = 5/235 (2%)
Frame = -2
Query: 833 AWERCND-----LITNLDENIAKSVLFFKTAREIWYDLEDRFGYASIAQIYALEQQLTEL 669
+W+RCND L+ ++ +IA SV++ +TA EIW DL +RF + ++IY +++ + E
Sbjct: 79 SWQRCNDMVISWLLNSIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEH 138
Query: 668 NQGSKSVSEFFTEIKTLWDAMNDASPLPSCTCKHCTCNLTQKVYQREQDHRLIQFMMKLS 489
QG +S+S ++T++K D ++ + S C+C +K+ +R++ R++QF+M L+
Sbjct: 139 RQGQQSISVYYTKLKAFXDELSSYHEVLS-----CSCGGLEKLKERDEKERVMQFLMGLN 193
Query: 488 DRFSVVRGNILMQLPLPNISTAFRMFSQEERHQEIFQNNSNTESLAFLAGSKKPYDNKDA 309
D ++ +RG IL+ PLP+ + + Q+E+ E+ NN N A LA DNK
Sbjct: 194 DSYAAIRGQILLMXPLPDTRXVYSLVLQQEKQVEVSLNNGNKNHYAMLADR----DNK-- 247
Query: 308 GNNVQRQVANTSGY*ANKSNDGSKKVSKFYCTHCKMSGHSLERCIKVHGYPLGFK 144
A ++ K+ + +C++C HS+E+C +HG+P+G K
Sbjct: 248 ---------------ATSAHXVQKQKTPLHCSYCDRDXHSIEKCYYLHGFPIGHK 287
Score = 45.4 bits (106), Expect(2) = 1e-38
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -1
Query: 1029 YYIHPSNASSSQLVTVKFNGVGFANWKRAMVLSLSAKNKLGFVDGSVTKP 880
+ +H S+ LV+ G ++ W RAM +SLSAK+K+GFV GS+ P
Sbjct: 21 FSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPP 70
>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 772
Score = 134 bits (337), Expect(2) = 5e-38
Identities = 82/262 (31%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Frame = -2
Query: 845 LDAKAWERCNDLI-----TNLDENIAKSVLFFKTAREIWYDLEDRFGYASIAQIYALEQQ 681
L+ AWERCN+LI ++ IA++++F + A ++W +L++RF ++ +L
Sbjct: 73 LNRTAWERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSS 132
Query: 680 LTELNQGSKSVSEFFTEIKTLWDAMNDASPLPSCTCKH-CTCNLTQKVYQREQDHRLIQF 504
+ L QG KSV ++FT IK+LW+ +N P+P CTC + C C + + ++IQF
Sbjct: 133 INNLKQGDKSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRCESMRAARDFRMEDQVIQF 192
Query: 503 MMKLSDRFSVVRGNILMQLPLPNISTAFRMFSQEERHQEIFQNNSNTESLAFLAGSKKPY 324
+ L+D FSVV+ +L+ PLP+I+ + M QEE N SLA
Sbjct: 193 LTGLNDSFSVVKTQVLLIDPLPSINKVYSMVIQEE------SNIIPPTSLA--------- 237
Query: 323 DNKDAGNNVQRQVANTSGY*ANKSNDGSKKVSKFYCTHCKMSGHSLERCIKVHGYPLGFK 144
N+D+ V A S K + YCT C+ + H++E C H +P
Sbjct: 238 SNEDSSILVNASDARKPFLRGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFP---- 293
Query: 143 NNKDKKVAALSNANLDQNSTIS 78
N +K A+ SNA +++ S
Sbjct: 294 -NANKPTAS-SNAVTSEHAVDS 313
Score = 51.6 bits (122), Expect(2) = 5e-38
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -1
Query: 1044 DVNGVYYIHPSNASSSQLVTVKFNGVGFANWKRAMVLSLSAKNKLGFVDGSVTKP 880
+++ +YY+HPS +S VT G + W R+M +L KNK F+DGSV P
Sbjct: 14 NIDSIYYVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIP 68