BLASTX nr result

ID: Angelica22_contig00008574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008574
         (2091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257...   301   3e-79
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]   301   3e-79
emb|CBI23698.3| unnamed protein product [Vitis vinifera]              297   7e-78
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol...   293   1e-76
ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,...   291   4e-76

>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
          Length = 464

 Score =  301 bits (772), Expect = 3e-79
 Identities = 158/238 (66%), Positives = 175/238 (73%), Gaps = 3/238 (1%)
 Frame = -3

Query: 2017 MDSDQGKLFIGGISWETDEQKLSEYFGNYGEVLLTSVMKDKLTGKPRGFGFVVFADPSVL 1838
            MDSDQGKLFIGGISWET E KL EYFG+YGEV    VM+DK TG+PRGFGFVVFADPS+L
Sbjct: 1    MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 1837 DTVLQEKHVIDGRLVEPKRAMSREEQQVSK--AXXXXXXXXXXXGDVRTKKIFVGGLPPT 1664
            D VLQEKH+IDGR VE KRA+SREEQQ S               G+V+TKKIFVGGLPPT
Sbjct: 61   DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120

Query: 1663 LSEDEFRQYFESYGQVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHKTFHDLNGKQV 1484
            LSE+ FRQYFE++G VTDVVVMYDQ T RPRGFGF+SFDTEDAVDRVL+KTFHDLNGKQV
Sbjct: 121  LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180

Query: 1483 EVKRALPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVSSYEGR-DSGRYMQSQNT 1313
            EVKRALP+D                            GN ++Y+GR DS RYMQ QNT
Sbjct: 181  EVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQNT 238



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 44/119 (36%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
 Frame = -3

Query: 1072 GYGNTQWXXXXXXXXXXXXXXXXXXXGQSPSGATAXXXXXXXXXXXXXXXXXXGNPAAYG 893
            GYGN                      GQSPSGA                     NP  YG
Sbjct: 321  GYGNAASWGSSAGGGAGSGGTGSASSGQSPSGAAGYGNQSYGYGGYGGSEGSYANPTGYG 380

Query: 892  AVGGRPVGPPNSGLSAGADVQSSXXXXXXXXXGDPTGNSGYGNQGWRSEPSQGAG-YGA 719
            AVGGR    PNS  + G ++Q S         GD  GNSGYGN  W+S+PSQ +G YGA
Sbjct: 381  AVGGRTGSGPNSN-AGGGELQGSGGGYMGGGYGDANGNSGYGNAAWKSDPSQASGNYGA 438


>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
          Length = 464

 Score =  301 bits (772), Expect = 3e-79
 Identities = 158/238 (66%), Positives = 175/238 (73%), Gaps = 3/238 (1%)
 Frame = -3

Query: 2017 MDSDQGKLFIGGISWETDEQKLSEYFGNYGEVLLTSVMKDKLTGKPRGFGFVVFADPSVL 1838
            MDSDQGKLFIGGISWET E KL EYFG+YGEV    VM+DK TG+PRGFGFVVFADPS+L
Sbjct: 1    MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 1837 DTVLQEKHVIDGRLVEPKRAMSREEQQVSK--AXXXXXXXXXXXGDVRTKKIFVGGLPPT 1664
            D VLQEKH+IDGR VE KRA+SREEQQ S               G+V+TKKIFVGGLPPT
Sbjct: 61   DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120

Query: 1663 LSEDEFRQYFESYGQVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHKTFHDLNGKQV 1484
            LSE+ FRQYFE++G VTDVVVMYDQ T RPRGFGF+SFDTEDAVDRVL+KTFHDLNGKQV
Sbjct: 121  LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180

Query: 1483 EVKRALPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVSSYEGR-DSGRYMQSQNT 1313
            EVKRALP+D                            GN ++Y+GR DS RYMQ QNT
Sbjct: 181  EVKRALPKDANPGGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQNT 238



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 44/123 (35%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
 Frame = -3

Query: 1084 HASSGYGNTQWXXXXXXXXXXXXXXXXXXXGQSPSGATAXXXXXXXXXXXXXXXXXXGNP 905
            + + GYGN                      GQSPSGA                     NP
Sbjct: 317  YGAVGYGNAASWGPSAGGGAGSGGTGSASSGQSPSGAAGYGNQSYGYGGYGGSEGSYANP 376

Query: 904  AAYGAVGGRPVGPPNSGLSAGADVQSSXXXXXXXXXGDPTGNSGYGNQGWRSEPSQGAG- 728
              YGAVGGR    PNS  + G ++Q S         GD  GNSGYGN  W+S+PSQ +G 
Sbjct: 377  TGYGAVGGRTGSGPNSN-AGGGELQGSGGGYMGGGYGDANGNSGYGNASWKSDPSQASGN 435

Query: 727  YGA 719
            YGA
Sbjct: 436  YGA 438


>emb|CBI23698.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  297 bits (761), Expect = 7e-78
 Identities = 158/238 (66%), Positives = 175/238 (73%), Gaps = 3/238 (1%)
 Frame = -3

Query: 2017 MDSDQGKLFIGGISWETDEQKLSEYFGNYGEVLLTSVMKDKLTGKPRGFGFVVFADPSVL 1838
            MDSDQGKLFIGGISWET E KL EYFG+YGEV    VM+DK TG+PRGFGFVVFADPS+L
Sbjct: 1    MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60

Query: 1837 DTVLQEKHVIDGRLVEPKRAMSREEQQVSK--AXXXXXXXXXXXGDVRTKKIFVGGLPPT 1664
            D VLQEKH+IDGR VE KRA+SREEQQ S               G+V+TKKIFVGGLPPT
Sbjct: 61   DRVLQEKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPT 120

Query: 1663 LSEDEFRQYFESYGQVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHKTFHDLNGKQV 1484
            LSE+ FRQYFE++G VTDVVVMYDQ T RPRGFGF+SFDTEDAVDRVL+KTFHDLNGKQV
Sbjct: 121  LSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQV 180

Query: 1483 EVKRALPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVSSYEGR-DSGRYMQSQNT 1313
            EVKRALP+D                            GN ++Y+GR DS RYMQ QNT
Sbjct: 181  EVKRALPKD------------ANPGGGSRYQGYGASGGNPTTYDGRMDSNRYMQPQNT 226


>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
          Length = 471

 Score =  293 bits (750), Expect = 1e-76
 Identities = 153/239 (64%), Positives = 177/239 (74%), Gaps = 5/239 (2%)
 Frame = -3

Query: 2017 MDSDQGKLFIGGISWETDEQKLSEYFGNYGEVLLTSVMKDKLTGKPRGFGFVVFADPSVL 1838
            MDSDQGKLFIGGISW+T E KL E+FGNYG+VL TSVM++K TGKPRGFGFVVFADP++L
Sbjct: 1    MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60

Query: 1837 DTVLQEKHVIDGRLVEPKRAMSREEQQVSKAXXXXXXXXXXXG----DVRTKKIFVGGLP 1670
            D VL++KHVIDGR V+ K+A SRE+QQ+S                  ++RTKKIFVGGLP
Sbjct: 61   DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLP 120

Query: 1669 PTLSEDEFRQYFESYGQVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHKTFHDLNGK 1490
            PTL+E++FRQYFESYG VTDVVVMYDQ T RPRGFGFISFDTEDAVDRVLHK+FHDLNGK
Sbjct: 121  PTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 180

Query: 1489 QVEVKRALPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVSSYEGR-DSGRYMQSQN 1316
            QVEVKRALP+D                            GN ++Y+GR DS RYMQ Q+
Sbjct: 181  QVEVKRALPKD---ANPGASGRMMGGAGGGGYQGYGASGGNQNAYDGRMDSSRYMQPQS 236


>ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
            communis] gi|223532245|gb|EEF34049.1| Heterogeneous
            nuclear ribonucleoprotein 27C, putative [Ricinus
            communis]
          Length = 470

 Score =  291 bits (746), Expect = 4e-76
 Identities = 155/244 (63%), Positives = 173/244 (70%), Gaps = 9/244 (3%)
 Frame = -3

Query: 2017 MDSDQGKLFIGGISWETDEQKLSEYFGNYGEVLLTSVMKDKLTGKPRGFGFVVFADPSVL 1838
            MDSDQGKLFIGGISWET E KL +YF  YG+V+ T VM+DK TG+PRGFGFVVFADP++L
Sbjct: 1    MDSDQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNIL 60

Query: 1837 DTVLQEKHVIDGRLVEPKRAMSREEQQVS--KAXXXXXXXXXXXGDVRTKKIFVGGLPPT 1664
            D VLQ+KH IDGR VE K+A+SREEQQ +               G++RTKKIFVGGLPP 
Sbjct: 61   DRVLQDKHTIDGRTVEAKKALSREEQQTNARSGNLNPPRNSGSGGNIRTKKIFVGGLPPA 120

Query: 1663 LSEDEFRQYFESYGQVTDVVVMYDQQTNRPRGFGFISFDTEDAVDRVLHKTFHDLNGKQV 1484
            L++DEFRQYFE+YG VTDVV+MYDQ T RPRGFGFISFD EDAVDRVLHKTFHDLNGKQV
Sbjct: 121  LTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGKQV 180

Query: 1483 EVKRALPRD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXGNVSSYEGR-DSGRYMQ 1325
            EVKRALP+D                                  GN SSYEGR DS RYMQ
Sbjct: 181  EVKRALPKDANPGGGNRSMGGGGNIGGGGGGGAGGYQGYGASGGNASSYEGRIDSNRYMQ 240

Query: 1324 SQNT 1313
            SQ T
Sbjct: 241  SQGT 244



 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = -3

Query: 991 QSPSGATAXXXXXXXXXXXXXXXXXXGNPAAYGAVGGRPVGPPNSGLSAGADVQSSXXXX 812
           QSPSG+                    GNPA Y AVGGR  G PNS + AG ++Q S    
Sbjct: 352 QSPSGSAGYGNQGYGYGSYGGNDGSYGNPAGYSAVGGRSGGAPNSNVGAGGELQGSGGGY 411

Query: 811 XXXXXGDPTGNSGYGNQGWRSEPSQGAG-YG 722
                GD  GN GYG  GWRS+PSQ +G YG
Sbjct: 412 MGSDYGDANGNPGYGTAGWRSDPSQASGNYG 442


Top