BLASTX nr result

ID: Angelica22_contig00008420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008420
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   146   6e-33
emb|CAN69546.1| hypothetical protein VITISV_010819 [Vitis vinifera]   146   6e-33
ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...   143   5e-32
emb|CBI38670.3| unnamed protein product [Vitis vinifera]              134   3e-29
ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vi...   134   3e-29

>ref|XP_002275490.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 473

 Score =  146 bits (368), Expect = 6e-33
 Identities = 88/201 (43%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
 Frame = -3

Query: 597 PLKNVFYKMRFHSRS--NPITPPTEFDETHVLNPVYNPGFTRVSSGPDYTSLISDENLLC 424
           P  +V +KM+  S S  N I P      T                  D  SL+SD+ LL 
Sbjct: 26  PFSHVVFKMQLQSLSPENDIVPRKSLTIT-----------------TDPFSLLSDQLLLH 68

Query: 423 ILSKVDEKQLGLCGLVCKRWEXXXXXXXXXXXXLDWEFLDSGRLIYRFPNLIDVDVVRAC 244
           ILSK+         LVCKRW             +DW+FL+SGRLI RFPNL D+D+VRAC
Sbjct: 69  ILSKLPYSHHTTTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLICRFPNLTDIDLVRAC 128

Query: 243 VRRSHSSGIVLSSRLVSVELNSGVSNDGFVRKLDLLDSRVVDQGIRVLVEGCLSLRKLVL 64
           VR  ++S I LS + +S++L+S   + GFV   DLL   V+D+G+R++ EGC +LRKLVL
Sbjct: 129 VRLPNNSAIWLSHKFLSIQLDSRFLSGGFVSGDDLLPPDVIDEGLRIVAEGCPNLRKLVL 188

Query: 63  VNVSEEGLSCVAEGCKTLQEL 1
           +  SE+GLS VA  C TLQEL
Sbjct: 189 IGASEKGLSSVATECLTLQEL 209


>emb|CAN69546.1| hypothetical protein VITISV_010819 [Vitis vinifera]
          Length = 376

 Score =  146 bits (368), Expect = 6e-33
 Identities = 88/201 (43%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
 Frame = -3

Query: 597 PLKNVFYKMRFHSRS--NPITPPTEFDETHVLNPVYNPGFTRVSSGPDYTSLISDENLLC 424
           P  +V +KM+  S S  N I P      T                  D  SL+SD+ LL 
Sbjct: 26  PFSHVVFKMQLQSLSPENDIVPRKSLTIT-----------------TDPFSLLSDQLLLH 68

Query: 423 ILSKVDEKQLGLCGLVCKRWEXXXXXXXXXXXXLDWEFLDSGRLIYRFPNLIDVDVVRAC 244
           ILSK+         LVCKRW             +DW+FL+SGRLI RFPNL D+D+VRAC
Sbjct: 69  ILSKLPYSHHTTTSLVCKRWMHLHGRLVQSVKLVDWDFLESGRLIRRFPNLTDIDLVRAC 128

Query: 243 VRRSHSSGIVLSSRLVSVELNSGVSNDGFVRKLDLLDSRVVDQGIRVLVEGCLSLRKLVL 64
           VR  ++S I LS + +S++L+S   + GFV   DLL   V+D+G+R++ EGC +LRKLVL
Sbjct: 129 VRLPNNSAIWLSHKFLSIQLDSRFLSGGFVSGDDLLPPDVIDEGLRIVAEGCPNLRKLVL 188

Query: 63  VNVSEEGLSCVAEGCKTLQEL 1
           +  SE+GLS VA  C TLQEL
Sbjct: 189 IGASEKGLSSVATECLTLQEL 209


>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
           gi|222840928|gb|EEE78475.1| f-box family protein
           [Populus trichocarpa]
          Length = 551

 Score =  143 bits (360), Expect = 5e-32
 Identities = 100/236 (42%), Positives = 128/236 (54%), Gaps = 26/236 (11%)
 Frame = -3

Query: 630 PRKSPFPP------LKN--PLKNVFYKMRFHSRSNPITP-------PT------EFDETH 514
           P K   PP      LKN  PLK+V + M+  S SNP TP       PT      +  +T 
Sbjct: 8   PLKKKRPPRWSDLWLKNTKPLKHVIFAMQLQSLSNPTTPTPTPTPTPTPKHQQQKQQQTD 67

Query: 513 VLNPVYNPGFTRVSSGP--DYTSLISDENLLCILSKVDEKQLGLCGLVCKRWEXXXXXXX 340
                 +   T +S+ P  D T L+ D+ LL ILSK+ + Q     LVCKRW        
Sbjct: 68  PPTKFKDKTGTLISNLPHIDRTLLLGDDLLLKILSKLPDSQRNPNSLVCKRWLNLQGRLV 127

Query: 339 XXXXXLDWEFLDSGRLIYRFPNLIDVDVVRACVRRSHSSGIVLSSRLVSVELNSGVSN-- 166
                LDWEFL+SGRL+ RFPNL  VD++  CV R H   ++LS R+  +++NSGVS   
Sbjct: 128 RSLKVLDWEFLESGRLLSRFPNLTHVDLLNGCVVRPHDCCVLLSHRIFKMDINSGVSGFL 187

Query: 165 -DGFVRKLDLLDSRVVDQGIRVLVEGCLSLRKLVLVNVSEEGLSCVAEGCKTLQEL 1
            D  V + +LL   VVD+G+R L  GC +LRKLV+   SE GL  VAE C TLQEL
Sbjct: 188 PDWRVCEENLLPVEVVDRGLRGLASGCPNLRKLVVAGASEMGLLSVAEECLTLQEL 243


>emb|CBI38670.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  134 bits (336), Expect = 3e-29
 Identities = 91/230 (39%), Positives = 120/230 (52%)
 Frame = -3

Query: 690 NLYLIINKTPQKSHDLMPSSPRKSPFPPLKNPLKNVFYKMRFHSRSNPITPPTEFDETHV 511
           N YL + K+P    +L   SP K+        L +V + M   S +            H 
Sbjct: 11  NPYLPLKKSPSSWSNLWFKSPNKA--------LNHVVFTMHLKSLTK-----------HQ 51

Query: 510 LNPVYNPGFTRVSSGPDYTSLISDENLLCILSKVDEKQLGLCGLVCKRWEXXXXXXXXXX 331
           L P     F R       T L+SDE LL +  K+ E Q     LVCKRW           
Sbjct: 52  LQPHKALIFDR-------TLLLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSV 104

Query: 330 XXLDWEFLDSGRLIYRFPNLIDVDVVRACVRRSHSSGIVLSSRLVSVELNSGVSNDGFVR 151
             L+W+FL+SGRL+ RFPNL  VD+V AC+    S G++L+ R+VSV ++S VS +GF+ 
Sbjct: 105 KLLEWDFLESGRLVSRFPNLTRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLE 164

Query: 150 KLDLLDSRVVDQGIRVLVEGCLSLRKLVLVNVSEEGLSCVAEGCKTLQEL 1
              +L S VVD+G+R L  G  +LRKL +V  SE GL  VAE C TLQEL
Sbjct: 165 NGKVLASNVVDRGLRFLASGYPNLRKLAVVGASELGLLSVAEECSTLQEL 214


>ref|XP_002263969.1| PREDICTED: F-box protein At5g07670 [Vitis vinifera]
          Length = 478

 Score =  134 bits (336), Expect = 3e-29
 Identities = 91/230 (39%), Positives = 120/230 (52%)
 Frame = -3

Query: 690 NLYLIINKTPQKSHDLMPSSPRKSPFPPLKNPLKNVFYKMRFHSRSNPITPPTEFDETHV 511
           N YL + K+P    +L   SP K+        L +V + M   S +            H 
Sbjct: 11  NPYLPLKKSPSSWSNLWFKSPNKA--------LNHVVFTMHLKSLTK-----------HQ 51

Query: 510 LNPVYNPGFTRVSSGPDYTSLISDENLLCILSKVDEKQLGLCGLVCKRWEXXXXXXXXXX 331
           L P     F R       T L+SDE LL +  K+ E Q     LVCKRW           
Sbjct: 52  LQPHKALIFDR-------TLLLSDELLLRVFQKLPESQRKPNSLVCKRWLSLQGRLVQSV 104

Query: 330 XXLDWEFLDSGRLIYRFPNLIDVDVVRACVRRSHSSGIVLSSRLVSVELNSGVSNDGFVR 151
             L+W+FL+SGRL+ RFPNL  VD+V AC+    S G++L+ R+VSV ++S VS +GF+ 
Sbjct: 105 KLLEWDFLESGRLVSRFPNLTRVDLVHACIVWPRSCGVLLNHRVVSVPVDSEVSQNGFLE 164

Query: 150 KLDLLDSRVVDQGIRVLVEGCLSLRKLVLVNVSEEGLSCVAEGCKTLQEL 1
              +L S VVD+G+R L  G  +LRKL +V  SE GL  VAE C TLQEL
Sbjct: 165 NGKVLASNVVDRGLRFLASGYPNLRKLAVVGASELGLLSVAEECSTLQEL 214


Top