BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00008339
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata] g...   343   6e-92
ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana...   341   2e-91
emb|CBI20115.3| unnamed protein product [Vitis vinifera]              337   4e-90
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro...   335   2e-89
gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]      326   6e-87

>ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata]
           gi|297333589|gb|EFH64007.1| EMB1473 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 242

 Score =  343 bits (879), Expect = 6e-92
 Identities = 173/237 (72%), Positives = 196/237 (82%), Gaps = 4/237 (1%)
 Frame = +1

Query: 76  MAMTCYSTWGVLPSHPSSKSLCNSQKITPFLGFSMS--SKPTFCLIKVNNNKRATQIRCQ 249
           M + C S+  +LPS  SS     S++ +PFLGFS++  SKP+  +    N+KR  Q++C+
Sbjct: 1   MTVLCSSSTVILPS--SSVKPSGSERKSPFLGFSLTAFSKPSVRVGIYANSKRGLQVKCE 58

Query: 250 DVDVEEATT--ALIPREQQWMFDATGFKGPDIWNTTWYPKASDHINTEKTWYIVDATDKI 423
               EE TT  +L+P  Q+WMFD     GPDIWNTTWYPKASDH+NT+K W++VDATDKI
Sbjct: 59  ---AEETTTKTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKI 115

Query: 424 LGRLASTIAIHIRGKNLETYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM 603
           LGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM
Sbjct: 116 LGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM 175

Query: 604 KVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLP 774
            VETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLP
Sbjct: 176 TVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLP 232


>ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana]
           gi|75314103|sp|Q9SYL9.1|RK13_ARATH RecName: Full=50S
           ribosomal protein L13, chloroplastic; AltName:
           Full=CL13; AltName: Full=Protein EMBRYO DEFECTIVE 1473;
           Flags: Precursor gi|4836870|gb|AAD30573.1|AC007260_4 50S
           Ribosomal protein L13 [Arabidopsis thaliana]
           gi|13878111|gb|AAK44133.1|AF370318_1 putative ribosomal
           protein L13 [Arabidopsis thaliana]
           gi|7572938|emb|CAA60775.1| ribosomal protein L13
           [Arabidopsis thaliana] gi|17104781|gb|AAL34279.1|
           putative ribosomal protein L13 [Arabidopsis thaliana]
           gi|332198009|gb|AEE36130.1| 50S ribosomal protein L13
           [Arabidopsis thaliana]
          Length = 241

 Score =  341 bits (875), Expect = 2e-91
 Identities = 171/235 (72%), Positives = 194/235 (82%), Gaps = 2/235 (0%)
 Frame = +1

Query: 76  MAMTCYSTWGVLPSHPSSKSLCNSQKITPFLGFSMS--SKPTFCLIKVNNNKRATQIRCQ 249
           MA+ C S+  +L S  SS     S++ +PFLGFS++  SKP+  +    N+KR  Q++C+
Sbjct: 1   MAVLCSSSTVILSS--SSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCE 58

Query: 250 DVDVEEATTALIPREQQWMFDATGFKGPDIWNTTWYPKASDHINTEKTWYIVDATDKILG 429
                  TT+L+P  Q+WMFD     GPDIWNTTWYPKASDH+NT+K W++VDATDKILG
Sbjct: 59  AEPT--TTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILG 116

Query: 430 RLASTIAIHIRGKNLETYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMKV 609
           RLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM V
Sbjct: 117 RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 176

Query: 610 ETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLP 774
           ETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP+DLP
Sbjct: 177 ETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLP 231


>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  337 bits (864), Expect = 4e-90
 Identities = 174/242 (71%), Positives = 198/242 (81%), Gaps = 5/242 (2%)
 Frame = +1

Query: 64  KQQTMAMTCYSTWGVLPS-HPSSK-SLCNSQKITPFLGFSMSS---KPTFCLIKVNNNKR 228
           +  TMA+T  S+  +LPS  PS K S  + +K TPFLGFS+S+   KP+F        ++
Sbjct: 136 ESSTMAITFASSSVMLPSPSPSPKPSFGSLKKTTPFLGFSISAANPKPSF-------PRQ 188

Query: 229 ATQIRCQDVDVEEATTALIPREQQWMFDATGFKGPDIWNTTWYPKASDHINTEKTWYIVD 408
           + ++ CQD        A++P +Q+WMF+ +   GPDIWN TWYPKA+DHINTEKTWYIVD
Sbjct: 189 SFRVNCQD------KAAVVPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVD 242

Query: 409 ATDKILGRLASTIAIHIRGKNLETYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSG 588
           ATDKILGRLASTIAI+IRGKNL TYTPSVDMG+FVIVVNAEKVAVSGKKR QKLYRRHSG
Sbjct: 243 ATDKILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSG 302

Query: 589 RPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVD 768
           RPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGP HPHEAQKP+D
Sbjct: 303 RPGGMKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPID 362

Query: 769 LP 774
           LP
Sbjct: 363 LP 364


>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
           vinifera]
          Length = 235

 Score =  335 bits (858), Expect = 2e-89
 Identities = 173/238 (72%), Positives = 196/238 (82%), Gaps = 5/238 (2%)
 Frame = +1

Query: 76  MAMTCYSTWGVLPS-HPSSK-SLCNSQKITPFLGFSMSS---KPTFCLIKVNNNKRATQI 240
           MA+T  S+  +LPS  PS K S  + +K TPFLGFS+S+   KP+F        +++ ++
Sbjct: 1   MAITFASSSVMLPSPSPSPKPSFGSLKKTTPFLGFSISAANPKPSF-------PRQSFRV 53

Query: 241 RCQDVDVEEATTALIPREQQWMFDATGFKGPDIWNTTWYPKASDHINTEKTWYIVDATDK 420
            CQD        A++P +Q+WMF+ +   GPDIWN TWYPKA+DHINTEKTWYIVDATDK
Sbjct: 54  NCQD------KAAVVPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVDATDK 107

Query: 421 ILGRLASTIAIHIRGKNLETYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGG 600
           ILGRLASTIAI+IRGKNL TYTPSVDMG+FVIVVNAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 108 ILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 167

Query: 601 MKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLP 774
           MKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGP HPHEAQKP+DLP
Sbjct: 168 MKVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPIDLP 225


>gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 241

 Score =  326 bits (836), Expect = 6e-87
 Identities = 165/237 (69%), Positives = 187/237 (78%), Gaps = 4/237 (1%)
 Frame = +1

Query: 76  MAMTCYSTWGVLPSHPSSK-SLCNSQKITP---FLGFSMSSKPTFCLIKVNNNKRATQIR 243
           MAM C S+     + PSS  S  N   I+P    +GFS S         ++N++R  ++R
Sbjct: 1   MAMLCASSSFTTSTKPSSSYSTKNGTSISPSPFVVGFSFSQS----WFSLSNSRRGFEVR 56

Query: 244 CQDVDVEEATTALIPREQQWMFDATGFKGPDIWNTTWYPKASDHINTEKTWYIVDATDKI 423
           C+  D    T   +P +Q+W+F+ +   GPDIWNTTWYPKA+DHINTEKTWYIVDATDKI
Sbjct: 57  CEKKDKSVVTR--VPLDQRWLFEESEINGPDIWNTTWYPKAADHINTEKTWYIVDATDKI 114

Query: 424 LGRLASTIAIHIRGKNLETYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM 603
           LGRLASTIAI+IRGKNL TYTPSVDMGAFVIVVNAEKVAVSGKKR QKLYRRHSGRPGGM
Sbjct: 115 LGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM 174

Query: 604 KVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLP 774
            VETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVY GP HPHEAQKP++LP
Sbjct: 175 TVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPIELP 231