BLASTX nr result
ID: Angelica22_contig00008195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica22_contig00008195 (668 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|2... 145 7e-33 ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 142 6e-32 ref|XP_001769186.1| predicted protein [Physcomitrella patens sub... 141 1e-31 gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 140 2e-31 gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 140 2e-31 >ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|224071453|ref|XP_002303467.1| predicted protein [Populus trichocarpa] gi|118486243|gb|ABK94963.1| unknown [Populus trichocarpa] gi|222833504|gb|EEE71981.1| predicted protein [Populus trichocarpa] gi|222840899|gb|EEE78446.1| predicted protein [Populus trichocarpa] Length = 71 Score = 145 bits (366), Expect = 7e-33 Identities = 69/71 (97%), Positives = 69/71 (97%) Frame = +1 Query: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYEEGDALDALCLVRYCCRRMLMTHVDLIEKLL 222 MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDAL LVRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 223 NYNTLEKSEGS 255 NYNTLEKSEGS Sbjct: 61 NYNTLEKSEGS 71 >ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3| unnamed protein product [Vitis vinifera] Length = 71 Score = 142 bits (358), Expect = 6e-32 Identities = 68/71 (95%), Positives = 68/71 (95%) Frame = +1 Query: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYEEGDALDALCLVRYCCRRMLMTHVDLIEKLL 222 MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDAL LVRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 223 NYNTLEKSEGS 255 NYNTLEKSE S Sbjct: 61 NYNTLEKSETS 71 >ref|XP_001769186.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679612|gb|EDQ66058.1| predicted protein [Physcomitrella patens subsp. patens] Length = 73 Score = 141 bits (355), Expect = 1e-31 Identities = 65/71 (91%), Positives = 68/71 (95%) Frame = +1 Query: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYEEGDALDALCLVRYCCRRMLMTHVDLIEKLL 222 MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDAL LVRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALALVRYCCRRMLMTHVDLIEKLL 60 Query: 223 NYNTLEKSEGS 255 NYNTLE++E + Sbjct: 61 NYNTLERNENT 71 >gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown [Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown [Picea sitchensis] Length = 71 Score = 140 bits (353), Expect = 2e-31 Identities = 66/69 (95%), Positives = 67/69 (97%) Frame = +1 Query: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYEEGDALDALCLVRYCCRRMLMTHVDLIEKLL 222 MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDAL LVRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 223 NYNTLEKSE 249 NYNTLE+SE Sbjct: 61 NYNTLERSE 69 >gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa balbisiana] Length = 70 Score = 140 bits (353), Expect = 2e-31 Identities = 66/69 (95%), Positives = 67/69 (97%) Frame = +1 Query: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYEEGDALDALCLVRYCCRRMLMTHVDLIEKLL 222 MIIPVRCFTCGKVIGNKWDTYLDLLQADY EGDALDAL LVRYCCRRMLMTHVDLIEKLL Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60 Query: 223 NYNTLEKSE 249 NYNTLEK+E Sbjct: 61 NYNTLEKTE 69