BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007902
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   580   e-163
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   579   e-163
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   578   e-162
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   578   e-162
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   566   e-159

>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  580 bits (1495), Expect = e-163
 Identities = 291/339 (85%), Positives = 319/339 (94%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1216 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1037
            MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1036 AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGT-QRYGNYPCPPYKIII 860
            AIAH+L+GPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVG+  R G YPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 859  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMN 680
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL++EIM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 679  NRIAYICSAEGLDLDSEALSTLSSISQGDLRRAITHLQGAARLFGSSISSRDLINVSGVI 500
            +RI +IC  E L+LDSEALSTLSSISQGDLRRAIT+LQGAARLFGS ISS+DLI+VSGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 499  PQEVVQALYSSCKSGNFELAEKEVNNVIAEGYPVSQMISQLFDLIVGLEDVSDEQKARIF 320
            PQ VVQAL+++CKSG+F+ A KEVNNVIAEGYPVSQM+ QLFD++V   D+SDEQKARI 
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVE-ADISDEQKARIC 299

Query: 319  KKMGEADKCLIDGADEYLQLLDMASNAMRALCNMPLEFP 203
            K++ EADKCL+DGADEYLQLLD+ASNAMRALCNMP EFP
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFP 338


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  579 bits (1492), Expect = e-163
 Identities = 285/338 (84%), Positives = 319/338 (94%), Gaps = 1/338 (0%)
 Frame = -2

Query: 1216 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1037
            MAPLLQSSQ WVEKYRPKQ+KDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1036 AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGT-QRYGNYPCPPYKIII 860
            AIAH+LYGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVG+ QR G YPCPPYKIII
Sbjct: 61   AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120

Query: 859  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMN 680
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EIM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180

Query: 679  NRIAYICSAEGLDLDSEALSTLSSISQGDLRRAITHLQGAARLFGSSISSRDLINVSGVI 500
            NRI +IC+ EGL LD+EALSTLSS+SQGDLRRAIT+LQGAARLFGSSISS+DLI+VSG I
Sbjct: 181  NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240

Query: 499  PQEVVQALYSSCKSGNFELAEKEVNNVIAEGYPVSQMISQLFDLIVGLEDVSDEQKARIF 320
            P+EV +A+Y++CK+G+F+LA KEVN+VIAEGYPVSQM++QLF+++V ++D+SDEQKARI 
Sbjct: 241  PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARIC 300

Query: 319  KKMGEADKCLIDGADEYLQLLDMASNAMRALCNMPLEF 206
            K +  ADKCL+DGADEYLQLLD+ SN MR+LCNMP EF
Sbjct: 301  KSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEF 338


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  578 bits (1490), Expect = e-162
 Identities = 282/339 (83%), Positives = 320/339 (94%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1216 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1037
            MAP+LQSSQPWVEKYRPKQVKDVAHQ+EVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1036 AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGT-QRYGNYPCPPYKIII 860
            AIAH+L+GPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVG+ QR G YPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120

Query: 859  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMN 680
            LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL++EIM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 679  NRIAYICSAEGLDLDSEALSTLSSISQGDLRRAITHLQGAARLFGSSISSRDLINVSGVI 500
            +R+ +IC  EGL+LD+EALSTLS +SQGDLRRAIT+LQGAARL+GS+ISS+DLI+VSGVI
Sbjct: 181  SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240

Query: 499  PQEVVQALYSSCKSGNFELAEKEVNNVIAEGYPVSQMISQLFDLIVGLEDVSDEQKARIF 320
            PQE V ALY++C+SG+F++A KEVNN+IAEGYPVSQM+ QL +++V  +D+SDEQKA+I 
Sbjct: 241  PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300

Query: 319  KKMGEADKCLIDGADEYLQLLDMASNAMRALCNMPLEFP 203
            K +G ADKCL+DGADEYLQLLD+ASN MRALCNMP EFP
Sbjct: 301  KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFP 339


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  578 bits (1490), Expect = e-162
 Identities = 290/339 (85%), Positives = 318/339 (93%), Gaps = 1/339 (0%)
 Frame = -2

Query: 1216 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1037
            MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1036 AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGT-QRYGNYPCPPYKIII 860
            AIAH+L+GPELYKSRVLELNASDDRGINVVRTKIK+FA VAVG+  R G YPCPPYKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 859  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMN 680
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL++EIM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 679  NRIAYICSAEGLDLDSEALSTLSSISQGDLRRAITHLQGAARLFGSSISSRDLINVSGVI 500
            +RI +IC  E L+LDSEALSTLSSISQGDLRRAIT+LQGAARLFGS ISS+DLI+VSGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 499  PQEVVQALYSSCKSGNFELAEKEVNNVIAEGYPVSQMISQLFDLIVGLEDVSDEQKARIF 320
            PQ VVQAL+++CKSG+F+ A KEVNNVIAEGYPVSQM+ QLFD++V   D+SDEQKARI 
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVE-ADISDEQKARIC 299

Query: 319  KKMGEADKCLIDGADEYLQLLDMASNAMRALCNMPLEFP 203
            K++ EADKCL+DGADEYLQLLD+ASNAMRALCNMP EFP
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFP 338


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
            gi|357520353|ref|XP_003630465.1| Replication factor C
            subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
            unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
            Replication factor C subunit [Medicago truncatula]
            gi|355524487|gb|AET04941.1| Replication factor C subunit
            [Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
            [Medicago truncatula]
          Length = 339

 Score =  567 bits (1460), Expect = e-159
 Identities = 279/338 (82%), Positives = 313/338 (92%), Gaps = 1/338 (0%)
 Frame = -2

Query: 1216 MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1037
            MAP++QS+QPWVEKYRPKQVKDVAHQ+EVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 1036 AIAHELYGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGTQRYGN-YPCPPYKIII 860
            AIAH+L+GPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGT +  N YPCPPYKII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120

Query: 859  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTDEIMN 680
            LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLT+EIM+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 679  NRIAYICSAEGLDLDSEALSTLSSISQGDLRRAITHLQGAARLFGSSISSRDLINVSGVI 500
            +RI YIC  EG+ LD+E LSTLS+ISQGDLRRAIT+LQ AARLFGSSISS+DLI+VSG++
Sbjct: 181  SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV 240

Query: 499  PQEVVQALYSSCKSGNFELAEKEVNNVIAEGYPVSQMISQLFDLIVGLEDVSDEQKARIF 320
            P EVV+AL  +C+SGNF+LA KEVNN IAEGYPVSQM++QLF+ IV   D+SDEQKARI 
Sbjct: 241  PAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 300

Query: 319  KKMGEADKCLIDGADEYLQLLDMASNAMRALCNMPLEF 206
            KK+GEADKCL+DGADEYLQLLD+ SN ++ALCNMP  F
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPEGF 338