BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007839
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir...   206   8e-51
pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn...   205   2e-50
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     203   7e-50
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   196   8e-48
ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|2...   190   6e-46

>gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus]
          Length = 297

 Score =  206 bits (524), Expect = 8e-51
 Identities = 121/299 (40%), Positives = 171/299 (57%), Gaps = 1/299 (0%)
 Frame = -3

Query: 1059 LSHLHGKLSISSNVCSPILNRSRSFYRPIVAVAATIMEKRNKSYWAAIETQIDTHLKKSI 880
            L+H + K  +  ++      R  +  RP++         R ++Y A IE+ I+++LKK+I
Sbjct: 5    LTHFNTKSGLFPSITKSKTTRPST--RPVILAMT-----RTQTYRATIESDIESYLKKAI 57

Query: 879  PIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXXXXXXXXXXXXXXXAYTHQ 700
            PIR P SVFEPMHHLTF+A +++A  LC+AACELV                    AYTH+
Sbjct: 58   PIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHE 117

Query: 699  HLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLSKQ-AHKNPDMILRMIIEI 523
            +L L+DGPM   S ++H F  NIELL  DG++P G EL+  S      NPD ILR IIE+
Sbjct: 118  NLPLTDGPMS-KSEIQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIEL 176

Query: 522  SRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEGELHXXXXXXXXXXXXGSEEEI 343
            +R +GS+GIV+G YHE+  G +Q  D E+++YVC+KKEG LH              E++I
Sbjct: 177  TRVMGSEGIVEGQYHEL--GLNQLNDLELIEYVCKKKEGTLHACGAACGAILGGCDEDKI 234

Query: 342  EKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXXXXXEFFDGRNVEEISTLLEI 166
            EKLR++GLYVG +QG+   +GKN  G    +           E F G  +E I  + E+
Sbjct: 235  EKLRRFGLYVGTVQGL---LGKNRSGFEGRIKELKELAVKELESFGGEKIELIRGVFEL 290


>pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small
           Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A
           Chain A, Crystal Structure Of Geranyl Diphosphate
           Synthase Small Subunit From Antirrhinum Majus
          Length = 273

 Score =  205 bits (521), Expect = 2e-50
 Identities = 115/260 (44%), Positives = 157/260 (60%), Gaps = 1/260 (0%)
 Frame = -3

Query: 942 RNKSYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXX 763
           R ++Y A IE+ I+++LKK+IPIR P SVFEPMHHLTF+A +++A  LC+AACELV    
Sbjct: 5   RTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELVGGDR 64

Query: 762 XXXXXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELL 583
                           AYTH++L L+DGPM   S ++H F  NIELL  DG++P G EL+
Sbjct: 65  SDAMAAAAAVHLMHVAAYTHENLPLTDGPMS-KSEIQHKFDPNIELLTGDGIIPFGLELM 123

Query: 582 GLSKQ-AHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEG 406
             S      NPD ILR IIE++R +GS+GIV+G YHE+  G +Q  D E+++YVC+KKEG
Sbjct: 124 ARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHEL--GLNQLNDLELIEYVCKKKEG 181

Query: 405 ELHXXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXX 226
            LH              E++IEKLR++GLYVG +QG+   +GKN  G    +        
Sbjct: 182 TLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGL---LGKNRSGFEGRIKELKELAV 238

Query: 225 XXXEFFDGRNVEEISTLLEI 166
              E F G  +E I  + E+
Sbjct: 239 KELESFGGEKIELIRGVFEL 258


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  203 bits (516), Expect = 7e-50
 Identities = 127/310 (40%), Positives = 175/310 (56%), Gaps = 8/310 (2%)
 Frame = -3

Query: 1074 MAATKLSHLHGKLSI----SSNVCSPILNRSRSFYRPIVAVAATIMEKRNKSYWAAIETQ 907
            MA    S +HG L      SSN   P+ +     +RP+V   +T     ++SYW+++   
Sbjct: 1    MAGALSSTIHGNLIARAVSSSNPKHPLFS-----HRPMVVAMST-----DQSYWSSVNAD 50

Query: 906  IDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXXXXXXXXXXX 727
            +DTHLK++IPIR P +VFEPM HL  SA +++AP LCIAACELV                
Sbjct: 51   LDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRL 110

Query: 726  XXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLSKQ-AHKNPD 550
                A TH++L L+D P  +  T   ++  NIELLI DG++P GFELL      A  N +
Sbjct: 111  VHASASTHENLPLTDRPRPMPRTRPTLYGPNIELLIADGIIPYGFELLARDDDAAENNSN 170

Query: 549  MILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKY---VCEKKEGELHXXXXXX 379
             +LR IIEISRA+GSQG+++G Y+E    ES+GE+   V +   VC KKEG LH      
Sbjct: 171  RVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGAC 230

Query: 378  XXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRFKIVXXXXXXXXXXXEFFDGR 199
                  GSE+EIEKLR+YGLYVGM+QG+++ V +  +   K V           + F+  
Sbjct: 231  GAILGGGSEDEIEKLRRYGLYVGMVQGILSKVDERKEWPVKEVNKLRDLALKELKDFNQA 290

Query: 198  NVEEISTLLE 169
             V+ IS L+E
Sbjct: 291  KVKTISILVE 300


>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  196 bits (498), Expect = 8e-48
 Identities = 114/243 (46%), Positives = 145/243 (59%), Gaps = 6/243 (2%)
 Frame = -3

Query: 960 ATIMEKRNK-SYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAAC 784
           A +M   +K  YW  I   I+THLK++IP+RPP  VFEPMHHLTF+A +S AP LCIAAC
Sbjct: 37  ACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAAC 96

Query: 783 ELVXXXXXXXXXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTV-EHMFMTNIELLIPDGM 607
           ELV                    A+TH+++ L+D P      +  H F  NIELL  DGM
Sbjct: 97  ELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGM 156

Query: 606 VPLGFELLG-LSKQAHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVK 430
           +P  FELL  L+  A  N D ILR++IEISRA+GSQG+V+G Y+E    +S G++   V 
Sbjct: 157 IPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVA 216

Query: 429 Y---VCEKKEGELHXXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVNGVGKNNQGRF 259
           +   VC+KKEG  H            G+EEEIEKLR+YGLYVG IQG+ N V  N +   
Sbjct: 217 WLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNKVEGNEEWSL 276

Query: 258 KIV 250
           K V
Sbjct: 277 KEV 279


>ref|XP_002322072.1| predicted protein [Populus trichocarpa] gi|222869068|gb|EEF06199.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  190 bits (482), Expect = 6e-46
 Identities = 103/216 (47%), Positives = 136/216 (62%), Gaps = 1/216 (0%)
 Frame = -3

Query: 933 SYWAAIETQIDTHLKKSIPIRPPTSVFEPMHHLTFSASKSTAPPLCIAACELVXXXXXXX 754
           SYW ++  +ID HLK++IPIRPP SVFEPMHHLTF+A ++TAP LCIAACELV       
Sbjct: 1   SYWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFAAPRTTAPALCIAACELVGGNRDQA 60

Query: 753 XXXXXXXXXXXXXAYTHQHLRLSDGPMHVGSTVEHMFMTNIELLIPDGMVPLGFELLGLS 574
                        A TH+H+  +     +G    H F +NIELL  DGMVP G ELL  S
Sbjct: 61  MAAASALRLMHAAALTHEHILSTGNRARIG----HSFGSNIELLTGDGMVPFGLELLAKS 116

Query: 573 KQ-AHKNPDMILRMIIEISRAVGSQGIVDGMYHEILCGESQGEDEEMVKYVCEKKEGELH 397
                 N + ILR+IIEI++A+GSQG+  G Y++   G+S     + + +VC+KKEGELH
Sbjct: 117 DDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQS-----DYIDHVCKKKEGELH 171

Query: 396 XXXXXXXXXXXXGSEEEIEKLRKYGLYVGMIQGMVN 289
                       G+EEEIEKLR+YGLYVG++QG+++
Sbjct: 172 SCAGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLS 207