BLASTX nr result

ID: Angelica22_contig00007833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007833
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281125.1| PREDICTED: 50S ribosomal protein L1-like [Vi...   274   4e-71
emb|CBI21998.3| unnamed protein product [Vitis vinifera]              236   2e-59
ref|XP_002320415.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-58
ref|XP_002880001.1| ribosomal protein L1 family protein [Arabido...   231   5e-58
ref|NP_850375.1| ribosomal protein .1/L10 family protein [Arabid...   229   1e-57

>ref|XP_002281125.1| PREDICTED: 50S ribosomal protein L1-like [Vitis vinifera]
          Length = 429

 Score =  274 bits (701), Expect = 4e-71
 Identities = 185/434 (42%), Positives = 239/434 (55%), Gaps = 27/434 (6%)
 Frame = -3

Query: 1517 MAAIKHLISQSRRINCFPLTH--LLRSHTCYRSLCSHTDXXXXXXXXXXXXXXXSRFPQP 1344
            MAA++ L+S +RR +C       LL  H   RSLCS +                      
Sbjct: 1    MAALELLLSHARR-HCTTRARASLLGFH---RSLCSSSSSSSNPDPPQPDEPLKRSTESV 56

Query: 1343 PVVPQSISYPVKPKPT--------EXXXXXXXXXXQFRASEGQID---GENSGMWSREDF 1197
            P+  QS+SY +KPK          +            R  + + D    E+  MW+RED 
Sbjct: 57   PI--QSVSYAMKPKDQSPPSPENPQPQTPSPQLPLPRRPRQPESDWGSAESRSMWTREDM 114

Query: 1196 RYVKDM--VNTVSYPSRVAPLPEDRK--------GXXXXXXXXXXXXXXXXXXXXXXXVF 1047
            RYVKD   ++ VSYP+RVAPLPEDR         G                       VF
Sbjct: 115  RYVKDAPSISPVSYPTRVAPLPEDRVTAEAEEEVGKKESEEMEKERIRIEAENRIRRRVF 174

Query: 1046 RIYEEEKLRFPTLIKQDGEKKTKEKVVYDLKEAIHLLKANTKCKFDETLEAHVKMTPDLR 867
            R+ EE+   FP LIK   EKK ++KV+ DL +AI  +KAN    FDET+EAHV++  D R
Sbjct: 175  RVEEEKAFPFPRLIKV--EKKQEQKVILDLMDAIREVKANANRNFDETIEAHVRLGIDRR 232

Query: 866  RTDLKLIGTASLPHGTGKPVRIAVFXXXXXXXXXXXXXXXXXXXXDLIEGIKN---GSIK 696
            R+D+ + G A+LPHG+GK VR+AVF                    DLI+ IKN   G  K
Sbjct: 233  RSDMTVRGAATLPHGSGKVVRVAVFAEGTAAEEARAAGADIVGGDDLIDEIKNLHQGGGK 292

Query: 695  VDFDKCISTPQLMSRVSKEISKILRRSTPNAKDGTVTTDLSRVVREAKQN-VNFRKDKSA 519
            ++FD+CI+TPQ+M R++K IS+ILR   PNA  G+VT D+++ V EAK+  V F+ DK+A
Sbjct: 293  LNFDRCIATPQMMPRLTK-ISRILRSLMPNANRGSVTVDIAKAVGEAKRGRVEFKMDKTA 351

Query: 518  IVHVGLGKVSFSEDALRENVGAFVNXXXXXXXXXXXXXXKFAGYVGTFHLCSTMGRSYPI 339
            IVHVGLGKVSFSE  LREN+GAFVN              K+AGYV  FHLCSTMG  +P+
Sbjct: 352  IVHVGLGKVSFSEKVLRENIGAFVNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGPGFPV 411

Query: 338  SIQSLSIAADRYNK 297
            SIQSLS+AAD YNK
Sbjct: 412  SIQSLSMAADHYNK 425


>emb|CBI21998.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  236 bits (601), Expect = 2e-59
 Identities = 133/255 (52%), Positives = 170/255 (66%), Gaps = 4/255 (1%)
 Frame = -3

Query: 1049 FRIYEEEKLRFPTLIKQDGEKKTKEKVVYDLKEAIHLLKANTKCKFDETLEAHVKMTPDL 870
            FR+ EE+   FP LIK   EKK ++KV+ DL +AI  +KAN    FDET+EAHV++  D 
Sbjct: 19   FRVEEEKAFPFPRLIKV--EKKQEQKVILDLMDAIREVKANANRNFDETIEAHVRLGIDR 76

Query: 869  RRTDLKLIGTASLPHGTGKPVRIAVFXXXXXXXXXXXXXXXXXXXXDLIEGIKN---GSI 699
            RR+D+ + G A+LPHG+GK VR+AVF                    DLI+ IKN   G  
Sbjct: 77   RRSDMTVRGAATLPHGSGKVVRVAVFAEGTAAEEARAAGADIVGGDDLIDEIKNLHQGGG 136

Query: 698  KVDFDKCISTPQLMSRVSKEISKILRRSTPNAKDGTVTTDLSRVVREAKQN-VNFRKDKS 522
            K++FD+CI+TPQ+M R++K IS+ILR   PNA  G+VT D+++ V EAK+  V F+ DK+
Sbjct: 137  KLNFDRCIATPQMMPRLTK-ISRILRSLMPNANRGSVTVDIAKAVGEAKRGRVEFKMDKT 195

Query: 521  AIVHVGLGKVSFSEDALRENVGAFVNXXXXXXXXXXXXXXKFAGYVGTFHLCSTMGRSYP 342
            AIVHVGLGKVSFSE  LREN+GAFVN              K+AGYV  FHLCSTMG  +P
Sbjct: 196  AIVHVGLGKVSFSEKVLRENIGAFVNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGPGFP 255

Query: 341  ISIQSLSIAADRYNK 297
            +SIQSLS+AAD YNK
Sbjct: 256  VSIQSLSMAADHYNK 270


>ref|XP_002320415.1| predicted protein [Populus trichocarpa] gi|222861188|gb|EEE98730.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  231 bits (590), Expect = 3e-58
 Identities = 141/323 (43%), Positives = 188/323 (58%), Gaps = 13/323 (4%)
 Frame = -3

Query: 1214 WSREDFRYVKDM-----VNTVSYPSRVAPLPEDRKGXXXXXXXXXXXXXXXXXXXXXXXV 1050
            WSREDFRY+KD      +  VSY  RVAPLPEDR                          
Sbjct: 39   WSREDFRYMKDAPPSISITPVSYAPRVAPLPEDRAQGRDAHNVDMERERMRIEARRNLGR 98

Query: 1049 --FRIYEEEK---LRFPTLIKQDGEKKTKEKVVYDLKEAIHLLKANTKCKFDETLEAHVK 885
              F++ EEE    L FP LIK     K ++  ++DL EAI  +KAN +  FDET+EAHVK
Sbjct: 99   RAFKVVEEEGKVVLPFPRLIKP---VKKEKNPLFDLNEAIKQVKANARNTFDETVEAHVK 155

Query: 884  MTPDLRRTDLKLIGTASLPHGTGKPVRIAVFXXXXXXXXXXXXXXXXXXXXDLIEGIKNG 705
            ++ D  R+DL + GT +LPHG  K +R+AVF                    +LI+ I   
Sbjct: 156  LSIDKSRSDLIVRGTLALPHGGKKTLRVAVFAEGADADEARAAGADIVGGVELIDQIAKA 215

Query: 704  SIKVDFDKCISTPQLMSRVSKEISKILRRS--TPNAKDGTVTTDLSRVVREAKQN-VNFR 534
              K+DFD C +TPQ   R++K + KIL R    P+ K GTV +D+S+ V+ AK+N + F+
Sbjct: 216  G-KIDFDHCFTTPQFFPRIAK-LGKILNRQGLMPDLKQGTVVSDVSKAVKNAKKNQIKFK 273

Query: 533  KDKSAIVHVGLGKVSFSEDALRENVGAFVNXXXXXXXXXXXXXXKFAGYVGTFHLCSTMG 354
             DK+AIVHVGLGKVSF+E++LRENVGAF+N              K+AGYV +FH+CSTMG
Sbjct: 274  MDKTAIVHVGLGKVSFTEESLRENVGAFMNALLQAKPAGLKKTSKYAGYVNSFHICSTMG 333

Query: 353  RSYPISIQSLSIAADRYNKTQMR 285
            + +P+SIQSLS A D Y+K  ++
Sbjct: 334  QGFPVSIQSLSKAVDYYSKVHLK 356


>ref|XP_002880001.1| ribosomal protein L1 family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325840|gb|EFH56260.1| ribosomal protein L1
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score =  231 bits (588), Expect = 5e-58
 Identities = 164/427 (38%), Positives = 223/427 (52%), Gaps = 16/427 (3%)
 Frame = -3

Query: 1517 MAAIKHLISQSRRINCF-PLTHLLRSHTCYRSLCSHTDXXXXXXXXXXXXXXXSRFPQPP 1341
            MAA+K L+SQ+RR     P +   +      S  S +D                   + P
Sbjct: 1    MAAMKLLLSQARRQGLIKPFSSPFQQIPRLFSSSSSSDSNESR--------------KKP 46

Query: 1340 VVPQSISYPVKPKPTEXXXXXXXXXXQFRASEGQIDGENSGMWSREDFRYVKDM--VNTV 1167
            V  + +SY  KPK  +            ++ E       S  W+RE+ RYVKD   +N V
Sbjct: 47   VTIEPVSYAAKPKDPKSEPTNVESTENLQSPE-------SSNWTREEIRYVKDSPSINPV 99

Query: 1166 SYPSRVAPLPEDR-----KGXXXXXXXXXXXXXXXXXXXXXXXVFRIYEEEK----LRFP 1014
            SY  RVAPLPEDR     +G                         R    E+    L  P
Sbjct: 100  SYAQRVAPLPEDRVAGENEGERTPEEMERERKRIELENRARRKFLRANAVEEDTSSLPLP 159

Query: 1013 TLIKQDGEKKTKEKVVYDLKEAIHLLKANTKCKFDETLEAHVKMTPDLRRTDLKLIGTAS 834
            TL+K   E K  +K ++DL EAI  +KAN K KFDETLEAHV++  +  R++L + GT +
Sbjct: 160  TLLKP--ELKHGKKPIFDLMEAIREIKANAKAKFDETLEAHVRLGIEKGRSELIVRGTLA 217

Query: 833  LPHGTGKPVRIAVFXXXXXXXXXXXXXXXXXXXXDLIEGI-KNGSIKVDFDKCISTPQLM 657
            LPH   K V++A F                    +LIE I K+G  K+DFD+C++TP++M
Sbjct: 218  LPHSVKKDVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSG--KIDFDRCLATPKMM 275

Query: 656  SRVSKEISKILRRS--TPNAKDGTVTTDLSRVVREAKQ-NVNFRKDKSAIVHVGLGKVSF 486
             RV K IS+IL      PN K G+VT D+++ V++AK  +  FR DK++I+HV LGK+SF
Sbjct: 276  PRVYK-ISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSF 334

Query: 485  SEDALRENVGAFVNXXXXXXXXXXXXXXKFAGYVGTFHLCSTMGRSYPISIQSLSIAADR 306
             E+ALRENVGAF+N              K+AGYV  FHLCSTMG+ YP+SIQSLS AAD 
Sbjct: 335  PEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSLSRAADL 394

Query: 305  YNKTQMR 285
            + K Q++
Sbjct: 395  HTKLQLK 401


>ref|NP_850375.1| ribosomal protein .1/L10 family protein [Arabidopsis thaliana]
            gi|20268740|gb|AAM14073.1| unknown protein [Arabidopsis
            thaliana] gi|21280899|gb|AAM45043.1| unknown protein
            [Arabidopsis thaliana] gi|26451659|dbj|BAC42926.1|
            unknown protein [Arabidopsis thaliana]
            gi|330255065|gb|AEC10159.1| ribosomal protein .1/L10
            family protein [Arabidopsis thaliana]
          Length = 415

 Score =  229 bits (585), Expect = 1e-57
 Identities = 162/427 (37%), Positives = 222/427 (51%), Gaps = 16/427 (3%)
 Frame = -3

Query: 1517 MAAIKHLISQSRRINCF-PLTHLLRSHTCYRSLCSHTDXXXXXXXXXXXXXXXSRFPQPP 1341
            MAA+K L+SQ+RR     P +   +      S  S +                +   +  
Sbjct: 1    MAAMKLLLSQARRQGLIKPFSSPFQQIPRLFSSSSSSSSSSSSSSDSNPSPDSNESRKKA 60

Query: 1340 VVPQSISYPVKPKPTEXXXXXXXXXXQFRASEGQIDGENSGMWSREDFRYVKDM--VNTV 1167
            V  + +SY  KPK  +            ++ E       S  W+RE+ RYVKD   +N V
Sbjct: 61   VTIEPVSYAAKPKDQKSEPKNVESTENLQSPE-------SANWTREEIRYVKDSPSINPV 113

Query: 1166 SYPSRVAPLPEDR-----KGXXXXXXXXXXXXXXXXXXXXXXXVFRIYEEEK----LRFP 1014
            SY  RVAPLPEDR     +G                         R    E+    L  P
Sbjct: 114  SYAQRVAPLPEDRVAGENEGDRTPEEMERERKRIELENRARRRFLRANAVEEDTSSLPLP 173

Query: 1013 TLIKQDGEKKTKEKVVYDLKEAIHLLKANTKCKFDETLEAHVKMTPDLRRTDLKLIGTAS 834
            TL+K   E K  +K ++DL EAI  +K N K KFDETLEAHV++  +  R++L + GT +
Sbjct: 174  TLLKP--ELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLA 231

Query: 833  LPHGTGKPVRIAVFXXXXXXXXXXXXXXXXXXXXDLIEGI-KNGSIKVDFDKCISTPQLM 657
            LPH   K V++A F                    +LIE I K+G  K+DFD+C++TP++M
Sbjct: 232  LPHSVKKDVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSG--KIDFDRCLATPKMM 289

Query: 656  SRVSKEISKILRRS--TPNAKDGTVTTDLSRVVREAKQ-NVNFRKDKSAIVHVGLGKVSF 486
             RV K IS+IL      PN K G+VT D+++ V++AK  +  FR DK++I+HV LGK+SF
Sbjct: 290  PRVYK-ISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSF 348

Query: 485  SEDALRENVGAFVNXXXXXXXXXXXXXXKFAGYVGTFHLCSTMGRSYPISIQSLSIAADR 306
            SE+ALRENVGAF+N              K+AGYV  FHLCSTMG+ YP+SIQSLS AAD 
Sbjct: 349  SEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSLSRAADL 408

Query: 305  YNKTQMR 285
            + K Q++
Sbjct: 409  HTKLQLK 415


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