BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007831
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   143   4e-32
gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     140   2e-31
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   129   7e-28
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   128   1e-27
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   128   1e-27

>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  143 bits (361), Expect = 4e-32
 Identities = 72/120 (60%), Positives = 90/120 (75%)
 Frame = -1

Query: 566 SRITARSEDLDMSLVLDVNTEIYPILVGDRLRMVLSKSLYPDGSTVTVHNPQDKQKSLAD 387
           SRI ARSE L M ++LDVNTEIYPI  G++L MVLS +L  DGS VT +  Q+ +KSLAD
Sbjct: 26  SRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLAD 85

Query: 386 KFEYVMHGLLYKMSEDTSGRDPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 207
           KFEY+MHG  YK+S++ SG D   EVY SFGGLQM+LKGDP     + VD+ +FLL+R+L
Sbjct: 86  KFEYIMHGKTYKLSDEGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL 145


>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  140 bits (354), Expect = 2e-31
 Identities = 70/120 (58%), Positives = 92/120 (76%)
 Frame = -1

Query: 566 SRITARSEDLDMSLVLDVNTEIYPILVGDRLRMVLSKSLYPDGSTVTVHNPQDKQKSLAD 387
           SRI ARSE  DM + LDVNTEIYP+ VGD+  MVL+ +L  DG+  + +  Q ++KSLAD
Sbjct: 26  SRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVLAPTLSLDGTPDSGYYMQGQRKSLAD 85

Query: 386 KFEYVMHGLLYKMSEDTSGRDPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 207
           KFEYVMHG LYK+SE++SG +   E+Y SFGGL MMLKGDP+   N+ +D++LFLLMR++
Sbjct: 86  KFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLMMLKGDPSNATNFELDQRLFLLMRKV 145


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  129 bits (324), Expect = 7e-28
 Identities = 63/120 (52%), Positives = 88/120 (73%)
 Frame = -1

Query: 566 SRITARSEDLDMSLVLDVNTEIYPILVGDRLRMVLSKSLYPDGSTVTVHNPQDKQKSLAD 387
           SRI A SE  DM + LDVN E YPI  G++ RMVL+ +L+ DG+ VT +  Q +QKSLAD
Sbjct: 26  SRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLHLDGADVTDYFTQGEQKSLAD 85

Query: 386 KFEYVMHGLLYKMSEDTSGRDPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 207
           KF+YVM+G++YK+S + SG D    +Y SFGGL M+LKGDP+ +    V+++LFLLM+++
Sbjct: 86  KFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLMILKGDPSNLNKLEVNKRLFLLMKKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  128 bits (322), Expect = 1e-27
 Identities = 66/121 (54%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
 Frame = -1

Query: 566 SRITARSEDLDMSLVLDVNTEIYPILVGDRLRMVLSKSLYPDGSTVTVHNPQDKQKSLAD 387
           SRI ARSE  DM + LDV TE+YP+  GDR  MVL+ +L  DG+  T    Q  +K+LAD
Sbjct: 276 SRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLAD 335

Query: 386 KFEYVMHGLLYKMSED-TSGRDPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRR 210
           KF+YVMHG LYK+SED +SG+    E+Y SFGGL MMLKGDP+   ++ +D++LFLL+R+
Sbjct: 336 KFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRK 395

Query: 209 L 207
           +
Sbjct: 396 V 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  128 bits (322), Expect = 1e-27
 Identities = 66/121 (54%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
 Frame = -1

Query: 566 SRITARSEDLDMSLVLDVNTEIYPILVGDRLRMVLSKSLYPDGSTVTVHNPQDKQKSLAD 387
           SRI ARSE  DM + LDV TE+YP+  GDR  MVL+ +L  DG+  T    Q  +K+LAD
Sbjct: 71  SRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLAD 130

Query: 386 KFEYVMHGLLYKMSED-TSGRDPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRR 210
           KF+YVMHG LYK+SED +SG+    E+Y SFGGL MMLKGDP+   ++ +D++LFLL+R+
Sbjct: 131 KFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRK 190

Query: 209 L 207
           +
Sbjct: 191 V 191