BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007826
         (3951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1860   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1804   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...  1791   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1783   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1761   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1860 bits (4819), Expect = 0.0
 Identities = 915/1139 (80%), Positives = 1016/1139 (89%), Gaps = 6/1139 (0%)
 Frame = -3

Query: 3796 VGIDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRST 3617
            + I K F A PVK AVDKF LLPEFLKVRGLVKQHLDSFNYFV+T +K IVRAN  I S+
Sbjct: 4    MSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSS 63

Query: 3616 VDKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSI 3437
            VD ++YLR+K VRIGEPS+ V+ + ++L+PH CRLSD+TYAAPI V+IEY+T S+ +K+ 
Sbjct: 64   VDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTR 123

Query: 3436 ATKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLS 3257
              K+DV+IG+MPIMLRSCCC+LY KDE ELARLGECPLDPGGYF+VKGTEKVILIQEQLS
Sbjct: 124  VEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLS 183

Query: 3256 KNRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGM 3077
            KNRIII+TDKKG + ASV SSTE+ KSKTVIVMEKEKI+L LNQF  K+PIM VMKAMGM
Sbjct: 184  KNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGM 243

Query: 3076 ESDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEG 2897
            ESDQEVVQM+GR+PRY  LLLPS+EECASH +YTQQ+ALEFLE KV K  FY+ S+EKEG
Sbjct: 244  ESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEG 303

Query: 2896 RAMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXX 2717
            R M ILRD F+AN+PVR+NNFR KC+YVAVMLRRMM+AI+NKDAMDDKDYVGNKR     
Sbjct: 304  RGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSG 363

Query: 2716 XXXXXXXXXXXXXLNEEAVKEVDAFLNKPSRS-RFDFST---YITRGRITVGLERALSTG 2549
                         +  E  K +DA L KPSRS RFDFS    +I R  ITVGLER LSTG
Sbjct: 364  QLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTG 423

Query: 2548 NWDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPC 2369
            NWDVKRFRM+RKGM+QVVARLS+IG+LG MT+I PQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 424  NWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 483

Query: 2368 DTPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFN 2189
            DTPEGEACGLVKNLALMTHVTTD+EE P+ISLCY LGVEDLELLSGEELH PNS+LIIFN
Sbjct: 484  DTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFN 543

Query: 2188 GLILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQHCLYIASDGGRVCRPLVIADRG 2009
            GLILGKHRRP++FA A+RKLRRAGKIGEF+S+FVNEKQHC+YIASDGGRVCRP+VIAD+G
Sbjct: 544  GLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKG 603

Query: 2008 VSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYEGEATIDTTHIEIEPF 1829
             SRIKEHHMKEL DG+R FD FLR+GLIEYLDVNEENNALIALYE +A  +TTHIEIEPF
Sbjct: 604  KSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPF 663

Query: 1828 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTT 1649
            TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+L+YLLVYPQRPLLTT
Sbjct: 664  TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTT 723

Query: 1648 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLAAVHQKY 1469
            RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AV+Q+Y
Sbjct: 724  RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRY 783

Query: 1468 ANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYKQSPIDTKNTISGTV- 1292
             NN SDRI+RP + G +AE+MQILD+DGLAAPGEII+P+D+YI K+SPI TK  +   V 
Sbjct: 784  ENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVG 843

Query: 1291 -PESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTRRPEVGDKFSSRHGQ 1115
             P+S YK S QT+KGPEGE  VVDRVAL +D+N N+ I F+IRHTRRPEVGDKFSSRHGQ
Sbjct: 844  LPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQ 903

Query: 1114 KGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 935
            KGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA
Sbjct: 904  KGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSA 963

Query: 934  FGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLD 755
            FGEPSGHADKVE IS+TLVKHGFSY+GKDFIYSGITG PLQAYIFMGPIYYQKLKHMVLD
Sbjct: 964  FGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLD 1023

Query: 754  KMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQ 575
            KMHARGSGP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSDPFEVQ
Sbjct: 1024 KMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQ 1083

Query: 574  VCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQSMNIVPRLQLTEA 398
            VCR CGLLGYYN+KLK  ICSTCK+G+ IST+KLPYACKLLFQELQ+MN+VPRL+LTEA
Sbjct: 1084 VCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1804 bits (4673), Expect = 0.0
 Identities = 890/1133 (78%), Positives = 990/1133 (87%), Gaps = 2/1133 (0%)
 Frame = -3

Query: 3790 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTVD 3611
            IDKQF+  P+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV T +K IV+AN  I S+ D
Sbjct: 26   IDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTD 85

Query: 3610 KNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIAT 3431
             ++YLR+  VRIGEPSV VN+V + ++PH CRLSD+TYAAPI VDIEY+ ES+ +K+   
Sbjct: 86   PSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPRE 145

Query: 3430 KSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSKN 3251
            K DV+IG+MPIMLRS CC+L+GKDE ELARLGECPLDPGGYFI+KGTEKV+LIQEQLSKN
Sbjct: 146  KKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKN 205

Query: 3250 RIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEK-KVPIMAVMKAMGME 3074
            RIII+TDKKG + ASV SSTEA KSKTVI ME EKIYL LN F   K+PIM V+KAMGME
Sbjct: 206  RIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGME 265

Query: 3073 SDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGR 2894
            S QEVVQM+GRDPRYG LLLPSIEECA   +YTQ++ALE+LE KV K +F SA  EKEGR
Sbjct: 266  SIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGR 325

Query: 2893 AMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXX 2714
            A+ ILRDVF+AN+PV +NNF  KC+YVAVM+RRMM+AI++KDAMDDKDYVGNKR      
Sbjct: 326  ALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQ 385

Query: 2713 XXXXXXXXXXXXLNEEAVKEVDAFLNKPSRS-RFDFSTYITRGRITVGLERALSTGNWDV 2537
                        +  E  K +D  L K SRS RFDFS ++    I+ GLER LSTGNWDV
Sbjct: 386  LISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDV 445

Query: 2536 KRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2357
            KRFRM+RKGM+QV+ARLSFI T+G +TR+ PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 446  KRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 505

Query: 2356 GEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNGLIL 2177
            GEACGLVKNLALMTHVTTDQEEGP+ISLCYCLGVEDLELLS EELH PNS+L+IFNG IL
Sbjct: 506  GEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRIL 565

Query: 2176 GKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQHCLYIASDGGRVCRPLVIADRGVSRI 1997
            GKHRRP+ FA  MR LRRAGKIGEF+S+FVNEKQHC+YIASDGGRVCRPLVIAD+GVSRI
Sbjct: 566  GKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRI 625

Query: 1996 KEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYEGEATIDTTHIEIEPFTILG 1817
            KE+HMKEL DG+R FD FLR+GLIEYLDVNEENNALIALYEGEAT +TTHIEIEPFTILG
Sbjct: 626  KEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILG 685

Query: 1816 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTIE 1637
            V AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLLTT+TIE
Sbjct: 686  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIE 745

Query: 1636 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLAAVHQKYANNT 1457
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK ++V+QKY NNT
Sbjct: 746  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNT 805

Query: 1456 SDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYKQSPIDTKNTISGTVPESFY 1277
            +DRI+RP R+      MQILD+DGLAAPGEIIRP+D+Y+ KQSPI  K +    +P++ Y
Sbjct: 806  ADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKGSPLPGIPDNAY 865

Query: 1276 KDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTRRPEVGDKFSSRHGQKGVCGT 1097
            +   Q +KG EGE  VVDRVALSTD+ND + I F+IR TRRPE+GDKFSSRHGQKGVCGT
Sbjct: 866  RPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGVCGT 925

Query: 1096 IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 917
            IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG
Sbjct: 926  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 985

Query: 916  HADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKMHARG 737
            HADKV+ ISETL+K GFSY GKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG
Sbjct: 986  HADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1045

Query: 736  SGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRKCG 557
            SGP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR CG
Sbjct: 1046 SGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCG 1105

Query: 556  LLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQSMNIVPRLQLTEA 398
            LLGYYN+KLK  ICS+CK+G+ IST+KLPYACKLL QELQSMNIVPRL+L EA
Sbjct: 1106 LLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score = 1791 bits (4640), Expect = 0.0
 Identities = 886/1141 (77%), Positives = 993/1141 (87%), Gaps = 10/1141 (0%)
 Frame = -3

Query: 3790 IDKQ-FLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTV 3614
            IDKQ   AAPVKSAVDKFQLLPEFLK RGLVKQHLDSFNYF+  G+K IVRAN  I STV
Sbjct: 4    IDKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 63

Query: 3613 DKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIA 3434
            D ++YLR+  V+IG+PS+VV+++ +Q++PH CRLSD TYAAPI V+IEY++ S+G+K   
Sbjct: 64   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGSHGRKEKM 123

Query: 3433 TKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSK 3254
             K+DV+IG+MPIMLRSCCC+LYGK+E ELARLGECPLDPGGYF+VKGTEKVILIQEQLSK
Sbjct: 124  IKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 183

Query: 3253 NRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGME 3074
            NRIII+ DKKG + ASV SSTEA KSKTVI+MEKEK+YL LNQF KK+PIM VMKAMGME
Sbjct: 184  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 243

Query: 3073 SDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGR 2894
            SDQEVVQM+GRDPRY  LLLPSIEECASH VYTQQ+ALE+LE  V +S + S+S EKE R
Sbjct: 244  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENR 303

Query: 2893 AMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXX 2714
            A+ ILRDVF+AN+PVR+NNFR KC+YVAVMLRRMMEA++NKDAMDDKDYVGNKR      
Sbjct: 304  ALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQ 363

Query: 2713 XXXXXXXXXXXXLNEEAVKEVDAFLNKPSRS-RFDFSTYITRGRITVGLERALSTGNWDV 2537
                        +  E  K  D  L K +RS RFDFS YI R  IT GLERALSTGNWDV
Sbjct: 364  LISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDV 423

Query: 2536 KRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2357
            KRFRMNRKG+TQV+ RLS++ +LG MTRI PQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 424  KRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 483

Query: 2356 GEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNGLIL 2177
            GEACGLVKNLALMTHVTTD+EE P+ISLC CLGVEDLELLSGEELH PNS+L+IFNGLIL
Sbjct: 484  GEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLIL 543

Query: 2176 GKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQHCLYIASDGGRVCRPLVIADRGVSRI 1997
            GKHRRP+QFA AMRKLRRAGKIGEF+S+FVNEKQ  +YIASDGGRVCRPLVIAD+GVSRI
Sbjct: 544  GKHRRPQQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRI 603

Query: 1996 KEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYEGEATIDTTHIEIEPFTILG 1817
            KEHHM+EL DG R FD FL EGLIEYLDVNEENNALIALYE EAT +TTHIEIEPFTILG
Sbjct: 604  KEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILG 663

Query: 1816 VCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTIE 1637
            V AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ  RMD+L+YLLVYPQRPLLTTRTIE
Sbjct: 664  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIE 723

Query: 1636 LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLAAVHQKYANNT 1457
            LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK    +QKY N  
Sbjct: 724  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGA 783

Query: 1456 SDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYKQSPIDTKNTI--SGTVPES 1283
            SDRI+RP+   +N E+ ++LD+DGLAAPGEIIR  D+YI K+SPI+T+  +  +  + + 
Sbjct: 784  SDRILRPR---KNEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADV 840

Query: 1282 FYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTRRPEVGDKFSSRHGQKGVC 1103
             Y+   Q +KG EGE+ VVDRVAL +D+N+N+ I + IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 841  KYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVC 900

Query: 1102 GTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 923
            GTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP
Sbjct: 901  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 960

Query: 922  SGHADKVEVIS------ETLVKHGFSYTGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMV 761
            SGHAD+VE I       ETLVKHGFSY GKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 961  SGHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1020

Query: 760  LDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFE 581
            LDKMHARGSGP+VM+TRQPT+GR+RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE
Sbjct: 1021 LDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFE 1080

Query: 580  VQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQSMNIVPRLQLTE 401
             QVCR CGLLGYYN KLKAA+C+TCK+G+K+ST+KLPYACKLL QELQSMNIVPRL+L E
Sbjct: 1081 AQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLKLAE 1140

Query: 400  A 398
            A
Sbjct: 1141 A 1141


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1783 bits (4617), Expect = 0.0
 Identities = 886/1153 (76%), Positives = 987/1153 (85%), Gaps = 5/1153 (0%)
 Frame = -3

Query: 3841 IINTYAMVSKENQQAVG--IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV 3668
            ++ T + +    Q  V   IDKQ L AP+KSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV
Sbjct: 3    LMQTDSSIGNNEQNLVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFV 62

Query: 3667 RTGMKNIVRANKEIRSTVDKNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAP 3488
              G+K IVRAN  I STVD  +YLR+K VRIG PS +++ V +QLSPH CRLSD TYAAP
Sbjct: 63   NIGIKKIVRANDRIVSTVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAP 122

Query: 3487 IYVDIEYVTESNGKKSIATKSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGY 3308
            I V++EY+  S+ +K+   K+DV+IG+MPIMLRS  C+LYGKDE ELARLGECPLDPGGY
Sbjct: 123  ILVNVEYIYGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGY 182

Query: 3307 FIVKGTEKVILIQEQLSKNRIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLN 3128
            F++KGTEKVILIQEQLSKNRIII+TDKKG + ASV SSTEA KSKT+I MEKEK+YL LN
Sbjct: 183  FVIKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLN 242

Query: 3127 QFEKKVPIMAVMKAMGMESDQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLE 2948
            QF KK+PIM V+KAMGMESDQEVVQM+GRDPRY  LLLPSIEECA   +YTQQ+ALE+L+
Sbjct: 243  QFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD 302

Query: 2947 GKVAKSRFYSASVEKEGRAMVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKD 2768
            GK             E RA+ ILRDVF+AN+PV +NNFR KC+YVAVMLRRMMEA++NKD
Sbjct: 303  GK-------------ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKD 349

Query: 2767 AMDDKDYVGNKRXXXXXXXXXXXXXXXXXXLNEEAVKEVDAFLNKPSRS-RFDFSTYITR 2591
            AMDDKDYVGNKR                  +  E  + +D  L K +RS RFD + YI R
Sbjct: 350  AMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVR 409

Query: 2590 GRITVGLERALSTGNWDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGP 2411
              IT GLER LSTGN+DVKRF+M+RKGMTQV+ RLS+I +LGMMTR+ PQFEKSRKVSGP
Sbjct: 410  DNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGP 469

Query: 2410 RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSG 2231
            RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD EEGP+ISLCYCLGVEDLELLSG
Sbjct: 470  RALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSG 529

Query: 2230 EELHAPNSYLIIFNGLILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQHCLYIASD 2051
            EELH PNS+L+IFNGLILGKHRRP+ F  +MRKLRRAGKIGEF+S+FVNEKQ  +Y+ASD
Sbjct: 530  EELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASD 589

Query: 2050 GGRVCRPLVIADRGVSRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYEG 1871
            GGRVCRPLVIADRGVSRIKEHHMKEL+DG+R FD FLR+GLIEYLDVNEENNAL+ALYEG
Sbjct: 590  GGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEG 649

Query: 1870 EATIDTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTL 1691
            EAT +TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L
Sbjct: 650  EATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSL 709

Query: 1690 IYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGR 1511
            +YLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGR
Sbjct: 710  LYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGR 769

Query: 1510 CIVMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYKQ 1331
            CIVMKK  A+ QKY N  SDRI+RP    R  E+ ++LD DGLAAPGEII+P D+Y+ K+
Sbjct: 770  CIVMKKYPAIRQKYENGASDRILRPD---RTVERERVLDYDGLAAPGEIIKPSDIYVKKE 826

Query: 1330 SPIDTKNTI--SGTVPESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTR 1157
             PIDT   +  S  +    Y+ S  +YKGPEGE+ V+DRVALS+DRN+N+ I  MIRHTR
Sbjct: 827  CPIDTMGPVKSSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTR 886

Query: 1156 RPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGG 977
            RPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGG
Sbjct: 887  RPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGG 946

Query: 976  KAGVSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIFM 797
            KAGVSCGRFHYGSAFGEPSGHAD VE ISETLV  GFSY GKD IYSGITG PLQAYIFM
Sbjct: 947  KAGVSCGRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFM 1006

Query: 796  GPIYYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLI 617
            GPIYYQKLKHMVLDKMHARG+GP+VM+TRQPTEGR+RNGGLRVGEMERDCLIAYGASMLI
Sbjct: 1007 GPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLI 1066

Query: 616  YERLMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQ 437
            +ERLMISSDPFEVQVCR CGLLGY+N KL+A ICSTCK+G+ IST+KLPYACKLL QELQ
Sbjct: 1067 FERLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQ 1126

Query: 436  SMNIVPRLQLTEA 398
            SMNIVPRL+L EA
Sbjct: 1127 SMNIVPRLKLAEA 1139


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1761 bits (4561), Expect = 0.0
 Identities = 859/1150 (74%), Positives = 1001/1150 (87%), Gaps = 19/1150 (1%)
 Frame = -3

Query: 3790 IDKQFLAAPVKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTGMKNIVRANKEIRSTVD 3611
            IDK+ L+AP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+  G+K IV AN  I S  D
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCRIASVTD 76

Query: 3610 KNVYLRYKSVRIGEPSVVVNSVMDQLSPHRCRLSDITYAAPIYVDIEYVTESNGKKSIAT 3431
             ++YLR+K+VR+GEPS++  ++ ++++PH CRL+D+TYAAPIYV+IEYV  S+GKK+ + 
Sbjct: 77   PSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHGKKATSV 136

Query: 3430 KSDVIIGKMPIMLRSCCCLLYGKDEEELARLGECPLDPGGYFIVKGTEKVILIQEQLSKN 3251
            K+D IIG+MPIMLRSC C+L+GKDEEELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 137  KNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3250 RIIIETDKKGCVQASVMSSTEARKSKTVIVMEKEKIYLSLNQFEKKVPIMAVMKAMGMES 3071
            RIII++DKKG + ASV SSTE  KSKTVI MEKEKIYL L+QF KK+PI+ V+KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMES 256

Query: 3070 DQEVVQMLGRDPRYGGLLLPSIEECASHHVYTQQEALEFLEGKVAKSRFYSASVEKEGRA 2891
            DQE+VQM+GRDPR+   LLPSIEEC S  V TQ++AL++LE KV K+  Y    EK+GRA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTS-YGPPPEKDGRA 315

Query: 2890 MVILRDVFVANIPVRENNFRLKCMYVAVMLRRMMEAIINKDAMDDKDYVGNKRXXXXXXX 2711
            + ILRD+F+A++PVR+NNFR KC YV VMLRRM+EA++NKD+MDDKDYVGNKR       
Sbjct: 316  LYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQL 375

Query: 2710 XXXXXXXXXXXLNEEAVKEVDAFLNKPSR-SRFDFSTYITRG----RITVGLERALSTGN 2546
                       +  EA+K+VDA L+KPSR SRFDFS Y+T G     I+VGLER LSTGN
Sbjct: 376  MSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGN 435

Query: 2545 WDVKRFRMNRKGMTQVVARLSFIGTLGMMTRIQPQFEKSRKVSGPRALQPSQWGMLCPCD 2366
            +D+KRFRM+RKGMTQV+ RLSFIG+LG +T+I PQFEKSRKVSGPR+LQPSQWGMLCPCD
Sbjct: 436  FDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCD 495

Query: 2365 TPEGEACGLVKNLALMTHVTTDQEEGPIISLCYCLGVEDLELLSGEELHAPNSYLIIFNG 2186
            TPEGE+CGLVKNLALMTHVTTD+EEGP++++CY LGV DLE+LS EELH P+S+L+I NG
Sbjct: 496  TPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNG 555

Query: 2185 LILGKHRRPKQFAQAMRKLRRAGKIGEFISIFVNEKQHCLYIASDGGRVCRPLVIADRGV 2006
            LILGKHRRP+ FA ++R+LRRAGKIGEF+S+F NEKQHC+Y+ASDGGRVCRPLVIAD+G+
Sbjct: 556  LILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGI 615

Query: 2005 SRIKEHHMKELKDGMRNFDSFLREGLIEYLDVNEENNALIALYEGEATI----------- 1859
            SR+K+HHMKEL+DG+R FD F+R+GLIEYLDVNEENNALIALYE EAT            
Sbjct: 616  SRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEGAEAAKI 675

Query: 1858 --DTTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIY 1685
              DTTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y
Sbjct: 676  KADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLY 735

Query: 1684 LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1505
            LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 736  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDRGFGRCI 795

Query: 1504 VMKKLAAVHQKYANNTSDRIIRPQRDGRNAEKMQILDEDGLAAPGEIIRPHDVYIYKQSP 1325
            VMKK+ A  QKY N T DRI+ PQR G +AEKMQILD+DG+A+PGEIIRP+DVYIYKQ P
Sbjct: 796  VMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYIYKQIP 855

Query: 1324 I-DTKNTISGTVPESFYKDSWQTYKGPEGETVVVDRVALSTDRNDNMSITFMIRHTRRPE 1148
            +  T++ I+  + +S Y+ + + +KGPEGET VVDRVAL +D++ ++ I ++IRHTRRPE
Sbjct: 856  VCTTRDKITSPLSDSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYIIRHTRRPE 915

Query: 1147 VGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAG 968
            +GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIELLG KAG
Sbjct: 916  LGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 975

Query: 967  VSCGRFHYGSAFGEPSGHADKVEVISETLVKHGFSYTGKDFIYSGITGMPLQAYIFMGPI 788
            VSCGRFHYGSAFGE SGHADKVE IS+TLV  GFSY+GKD +YSG++G PL+AYIFMGPI
Sbjct: 976  VSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLEAYIFMGPI 1035

Query: 787  YYQKLKHMVLDKMHARGSGPKVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 608
            YYQKLKHMVLDKMHARGSGP+VMMTRQPTEG+S+NGGLRVGEMERDCLIAYGASMLIYER
Sbjct: 1036 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYER 1095

Query: 607  LMISSDPFEVQVCRKCGLLGYYNYKLKAAICSTCKDGEKISTLKLPYACKLLFQELQSMN 428
            LMISSDPFEVQVCR CGLLGYYNYKLK A+CSTCK+G+ I+T+KLPYACKLLFQELQSMN
Sbjct: 1096 LMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQELQSMN 1155

Query: 427  IVPRLQLTEA 398
            +VPRL+L EA
Sbjct: 1156 VVPRLKLVEA 1165