BLASTX nr result
ID: Angelica22_contig00007572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00007572
(1692 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96879.1| hypothetical protein [Cleome spinosa] 332 1e-88
ref|XP_002884326.1| hypothetical protein ARALYDRAFT_477488 [Arab... 330 7e-88
ref|NP_186903.1| putative DNA repair protein RAD23-3 [Arabidopsi... 325 2e-86
ref|NP_001189793.1| putative DNA repair protein RAD23-3 [Arabido... 325 2e-86
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23... 325 2e-86
>gb|ABD96879.1| hypothetical protein [Cleome spinosa]
Length = 383
Score = 332 bits (852), Expect = 1e-88
Identities = 179/285 (62%), Positives = 193/285 (67%), Gaps = 2/285 (0%)
Frame = +1
Query: 655 QSVTSSQTPAPTMLPQTVSGTTPIXXXXXXXXXXXXXXXXVYGHAASNLVAGGNFESTIQ 834
Q TS QTPAP +PQ T P +YG AASNLVAG N E+TIQ
Sbjct: 106 QPSTSPQTPAPVAMPQAAPETAPAPAPAVTQTD-------IYGQAASNLVAGSNLEATIQ 158
Query: 835 QILDMGGGSWDRDTVVRAMRAAFNNPERAVEYLYSGIPEXXXXXXXXXXXXXXXXXXXXX 1014
QILDMGGGSWDRDTVVRA+RAA+NNPERAVEYLYSGIPE
Sbjct: 159 QILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVPPVAQAPASGGQPTNPP 218
Query: 1015 XXXXXX-TTVPHVGPNANPLNLFPQGLPNMGSNASVGNLDFLRNSPQFQALRTMVQTNPQ 1191
P GPNANPL+LFPQGLPN+GSN G LDFLRNS QFQALR MVQ NPQ
Sbjct: 219 AQAGQQPAAAPTSGPNANPLDLFPQGLPNVGSNTGAGTLDFLRNSQQFQALRAMVQANPQ 278
Query: 1192 ILQPMLQELGKQNPNLMRLIQDHQADFLGLINEPVXXXXXXXXXXXXXAA-PQALSVTPE 1368
ILQPMLQELGKQNP LMRLIQ+HQADFL LINEPV A PQA+ VTPE
Sbjct: 279 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGGEGGNISSQLGGAMPQAIQVTPE 338
Query: 1369 ERDAIERLEAMGFNRAVVLQVFIACNRNEELAANYLLDHGHEFDD 1503
ER+AIERLEAMGF R +VL+VF ACN+NEELAANYLLDH HEFD+
Sbjct: 339 EREAIERLEAMGFERGLVLEVFFACNKNEELAANYLLDHMHEFDE 383
Score = 76.3 bits (186), Expect(2) = 1e-14
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +2
Query: 293 TNFEIQVKPDDTIADVKTIIEEKQGKDVYPAAQQMLVHKGKVLKDATTXXXXXXXXXXXX 472
T+FEI+VKP+DT+ADVK IE QG DVYP+AQQML+H+GKVL+D TT
Sbjct: 11 THFEIEVKPEDTVADVKKNIETVQGADVYPSAQQMLIHQGKVLRDETTMEENKVAEKSFI 70
Query: 473 XXMLSK 490
MLSK
Sbjct: 71 VIMLSK 76
Score = 31.6 bits (70), Expect(2) = 1e-14
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 177 MKVFIKTLKGTNFEIQ 224
MK+F+KTLKGT+FEI+
Sbjct: 1 MKIFVKTLKGTHFEIE 16
>ref|XP_002884326.1| hypothetical protein ARALYDRAFT_477488 [Arabidopsis lyrata subsp.
lyrata] gi|297330166|gb|EFH60585.1| hypothetical protein
ARALYDRAFT_477488 [Arabidopsis lyrata subsp. lyrata]
Length = 417
Score = 330 bits (846), Expect = 7e-88
Identities = 175/288 (60%), Positives = 195/288 (67%), Gaps = 4/288 (1%)
Frame = +1
Query: 652 VQSVTSSQTPAPTMLPQTVSGTTPIXXXXXXXXXXXXXXXXVYGHAASNLVAGGNFESTI 831
V + + TP P +P T+ +TP VYG AASNL AG N ESTI
Sbjct: 135 VAATETVTTPIPEPVPATIPSSTPAPDSAPAGSQGD-----VYGQAASNLAAGSNLESTI 189
Query: 832 QQILDMGGGSWDRDTVVRAMRAAFNNPERAVEYLYSGIPEXXXXXXXXXXXXXXXXXXXX 1011
QQILDMGGG+WDR+TVVRA+RAAFNNPERAVEYLY+GIPE
Sbjct: 190 QQILDMGGGTWDRETVVRALRAAFNNPERAVEYLYTGIPEQAEVPPVARAPASFGQPANP 249
Query: 1012 XXXXXXXTTVPHVGPNANPLNLFPQGLPNMGSNASVGNLDFLRNSPQFQALRTMVQTNPQ 1191
P GPNANPL+LFPQGLPN+G N G LDFLRNS QFQALR MVQ NPQ
Sbjct: 250 SAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQALRAMVQANPQ 309
Query: 1192 ILQPMLQELGKQNPNLMRLIQDHQADFLGLINEPVXXXXXXXXXXXXXAA----PQALSV 1359
+LQPMLQELGKQNPNLMRLIQDHQADFL LINEPV AA PQA+ V
Sbjct: 310 VLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQV 369
Query: 1360 TPEERDAIERLEAMGFNRAVVLQVFIACNRNEELAANYLLDHGHEFDD 1503
TPEER+AIERLEAMGF+RA+VL+VF ACN+NEELAANYLLDH HEF++
Sbjct: 370 TPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFEE 417
Score = 70.5 bits (171), Expect(2) = 5e-13
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +2
Query: 293 TNFEIQVKPDDTIADVKTIIEEKQGKDVYPAAQQMLVHKGKVLKDATTXXXXXXXXXXXX 472
T+FEI+VK +D++ADVK IE QG DVYPAA+QML+H+GKVLKD TT
Sbjct: 11 THFEIEVKLEDSVADVKKNIETVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFI 70
Query: 473 XXMLSK 490
ML+K
Sbjct: 71 VVMLNK 76
Score = 31.6 bits (70), Expect(2) = 5e-13
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 177 MKVFIKTLKGTNFEIQ 224
MK+F+KTLKGT+FEI+
Sbjct: 1 MKIFVKTLKGTHFEIE 16
>ref|NP_186903.1| putative DNA repair protein RAD23-3 [Arabidopsis thaliana]
gi|55976503|sp|Q84L31.2|RD23C_ARATH RecName:
Full=Putative DNA repair protein RAD23-3; AltName:
Full=RAD23-like protein 3; Short=AtRAD23-3
gi|6957717|gb|AAF32461.1| putative RAD23 [Arabidopsis
thaliana] gi|14517454|gb|AAK62617.1| AT3g02540/F16B3_17
[Arabidopsis thaliana] gi|21360453|gb|AAM47342.1|
AT3g02540/F16B3_17 [Arabidopsis thaliana]
gi|30409724|dbj|BAC76392.1| RAD23-like protein
[Arabidopsis thaliana] gi|110735092|gb|ABG89116.1|
Rad23-1 [synthetic construct] gi|332640303|gb|AEE73824.1|
putative DNA repair protein RAD23-3 [Arabidopsis
thaliana]
Length = 419
Score = 325 bits (834), Expect = 2e-86
Identities = 174/288 (60%), Positives = 193/288 (67%), Gaps = 4/288 (1%)
Frame = +1
Query: 652 VQSVTSSQTPAPTMLPQTVSGTTPIXXXXXXXXXXXXXXXXVYGHAASNLVAGGNFESTI 831
V + + TP P +P T+S +TP VYG AASNL AG N ESTI
Sbjct: 137 VAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGD-----VYGQAASNLAAGSNLESTI 191
Query: 832 QQILDMGGGSWDRDTVVRAMRAAFNNPERAVEYLYSGIPEXXXXXXXXXXXXXXXXXXXX 1011
QQILDMGGG+WDR+TVV A+RAAFNNPERAVEYLY+GIPE
Sbjct: 192 QQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVARPPASAGQPANP 251
Query: 1012 XXXXXXXTTVPHVGPNANPLNLFPQGLPNMGSNASVGNLDFLRNSPQFQALRTMVQTNPQ 1191
P GPNANPL+LFPQGLPN+G N G LDFLRNS QFQALR MVQ NPQ
Sbjct: 252 PAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQALRAMVQANPQ 311
Query: 1192 ILQPMLQELGKQNPNLMRLIQDHQADFLGLINEPVXXXXXXXXXXXXXAA----PQALSV 1359
+LQPMLQELGKQNPNLMRLIQDHQADFL LINEPV AA PQA+ V
Sbjct: 312 VLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQV 371
Query: 1360 TPEERDAIERLEAMGFNRAVVLQVFIACNRNEELAANYLLDHGHEFDD 1503
T EER+AIERLEAMGF RA+VL+VF ACN+NEELAANYLLDH HEF++
Sbjct: 372 THEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 419
Score = 72.8 bits (177), Expect(2) = 1e-13
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +2
Query: 293 TNFEIQVKPDDTIADVKTIIEEKQGKDVYPAAQQMLVHKGKVLKDATT 436
T+FEI+VKP+D++ DVK IE QG DVYPAA+QML+H+GKVLKD TT
Sbjct: 11 THFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETT 58
Score = 31.6 bits (70), Expect(2) = 1e-13
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 177 MKVFIKTLKGTNFEIQ 224
MK+F+KTLKGT+FEI+
Sbjct: 1 MKIFVKTLKGTHFEIE 16
>ref|NP_001189793.1| putative DNA repair protein RAD23-3 [Arabidopsis thaliana]
gi|332640305|gb|AEE73826.1| putative DNA repair protein
RAD23-3 [Arabidopsis thaliana]
Length = 418
Score = 325 bits (834), Expect = 2e-86
Identities = 174/288 (60%), Positives = 193/288 (67%), Gaps = 4/288 (1%)
Frame = +1
Query: 652 VQSVTSSQTPAPTMLPQTVSGTTPIXXXXXXXXXXXXXXXXVYGHAASNLVAGGNFESTI 831
V + + TP P +P T+S +TP VYG AASNL AG N ESTI
Sbjct: 137 VAATETVTTPIPEPVPATISSSTPAPDSAPVGQGD------VYGQAASNLAAGSNLESTI 190
Query: 832 QQILDMGGGSWDRDTVVRAMRAAFNNPERAVEYLYSGIPEXXXXXXXXXXXXXXXXXXXX 1011
QQILDMGGG+WDR+TVV A+RAAFNNPERAVEYLY+GIPE
Sbjct: 191 QQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVARPPASAGQPANP 250
Query: 1012 XXXXXXXTTVPHVGPNANPLNLFPQGLPNMGSNASVGNLDFLRNSPQFQALRTMVQTNPQ 1191
P GPNANPL+LFPQGLPN+G N G LDFLRNS QFQALR MVQ NPQ
Sbjct: 251 PAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNPGAGTLDFLRNSQQFQALRAMVQANPQ 310
Query: 1192 ILQPMLQELGKQNPNLMRLIQDHQADFLGLINEPVXXXXXXXXXXXXXAA----PQALSV 1359
+LQPMLQELGKQNPNLMRLIQDHQADFL LINEPV AA PQA+ V
Sbjct: 311 VLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQV 370
Query: 1360 TPEERDAIERLEAMGFNRAVVLQVFIACNRNEELAANYLLDHGHEFDD 1503
T EER+AIERLEAMGF RA+VL+VF ACN+NEELAANYLLDH HEF++
Sbjct: 371 THEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE 418
Score = 72.8 bits (177), Expect(2) = 1e-13
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +2
Query: 293 TNFEIQVKPDDTIADVKTIIEEKQGKDVYPAAQQMLVHKGKVLKDATT 436
T+FEI+VKP+D++ DVK IE QG DVYPAA+QML+H+GKVLKD TT
Sbjct: 11 THFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETT 58
Score = 31.6 bits (70), Expect(2) = 1e-13
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 177 MKVFIKTLKGTNFEIQ 224
MK+F+KTLKGT+FEI+
Sbjct: 1 MKIFVKTLKGTHFEIE 16
>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
product [Vitis vinifera]
Length = 381
Score = 325 bits (834), Expect = 2e-86
Identities = 169/244 (69%), Positives = 187/244 (76%), Gaps = 1/244 (0%)
Frame = +1
Query: 775 VYGHAASNLVAGGNFESTIQQILDMGGGSWDRDTVVRAMRAAFNNPERAVEYLYSGIPEX 954
+YG AASNLVAG N E TIQQILDMGGGSWDRDTVVRA+RAA+NNPERAVEYLYSGIPE
Sbjct: 140 IYGQAASNLVAGNNLEVTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEQ 199
Query: 955 XXXXXXXXXXXXXXXXXXXXXXXXXX-TTVPHVGPNANPLNLFPQGLPNMGSNASVGNLD 1131
TTV GPNANPL+LFPQGLP+MGSNAS G LD
Sbjct: 200 AEGPPAARPPASGLAVNLPTQAPQGPQTTVASSGPNANPLDLFPQGLPSMGSNASAGTLD 259
Query: 1132 FLRNSPQFQALRTMVQTNPQILQPMLQELGKQNPNLMRLIQDHQADFLGLINEPVXXXXX 1311
FLRNSPQFQALR MVQ NPQILQPMLQELGKQNP+LMRLIQ+HQADFL LINEPV
Sbjct: 260 FLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPV--EGE 317
Query: 1312 XXXXXXXXAAPQALSVTPEERDAIERLEAMGFNRAVVLQVFIACNRNEELAANYLLDHGH 1491
PQA+++TPEER++IERLEAMGF+RA+VL+VF ACN+NEELAANYLLDH H
Sbjct: 318 GNVLGQLGTVPQAVTITPEERESIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMH 377
Query: 1492 EFDD 1503
EF++
Sbjct: 378 EFEE 381
Score = 77.8 bits (190), Expect(2) = 4e-15
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = +2
Query: 293 TNFEIQVKPDDTIADVKTIIEEKQGKDVYPAAQQMLVHKGKVLKDATTXXXXXXXXXXXX 472
T+FEI+VKP+DT+ADVK IE G DVYPAAQQML+H+GKVLKDATT
Sbjct: 11 THFEIEVKPEDTVADVKKNIELVHGTDVYPAAQQMLIHQGKVLKDATTLDENQVAESSFV 70
Query: 473 XXMLSK 490
MLSK
Sbjct: 71 VIMLSK 76
Score = 31.6 bits (70), Expect(2) = 4e-15
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 177 MKVFIKTLKGTNFEIQ 224
MK+F+KTLKGT+FEI+
Sbjct: 1 MKIFVKTLKGTHFEIE 16