BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007544
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   104   7e-21
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    94   9e-18
gb|AAP12935.1| retrotransposon protein, putative, unclassified [...    93   3e-17
gb|AAR96231.1| putative integrase [Oryza sativa Japonica Group] ...    91   7e-17
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...    91   1e-16

>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  104 bits (260), Expect = 7e-21
 Identities = 47/90 (52%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
 Frame = +3

Query: 90  STEPRRTRNLTDIYNDTEEVELDEELYLMGVE-EPANFKQAVKDREWRKAMEKEIESIEK 266
           S  PRR RN+ ++Y++TE +    +L+ + V+ +P NF +A+KD+ WR+AME+EI++IEK
Sbjct: 497 SERPRRMRNIQELYDETEVIN---DLFCLFVDSKPLNFDEAMKDKRWRQAMEEEIKAIEK 553

Query: 267 NNTWELSTLPTGQKVIGLKWIFKLKKDADG 356
           NNTWELS+LP G + IG+KW+FK+KK+A G
Sbjct: 554 NNTWELSSLPKGHEAIGVKWVFKIKKNAKG 583


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 8/115 (6%)
 Frame = +3

Query: 36   TPETQLHGSRLSP---ENYDDSTEPRRTRNLTDIYNDTEEVEL-----DEELYLMGVEEP 191
            +P T   G   SP   +N D    PRR R+L D+  +   V+L     D E  L   EEP
Sbjct: 838  SPSTNSAGVVPSPGTDDNIDTDDGPRRYRSLADVLREAPRVDLVEDECDGEALLAESEEP 897

Query: 192  ANFKQAVKDREWRKAMEKEIESIEKNNTWELSTLPTGQKVIGLKWIFKLKKDADG 356
            +++++A     W +AM++E+E+IEKN TWEL+ LP G + IGLKW++KLKK+  G
Sbjct: 898  SSYREAAGQPAWEEAMQREMEAIEKNKTWELAMLPAGHRAIGLKWVYKLKKNTAG 952


>gb|AAP12935.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1283

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
 Frame = +3

Query: 15   DMSQNLATP-ETQLHGSR----LSPENYDDSTEPRRTRNLTDIYNDTEEVEL----DEEL 167
            D S++  TP  T  H +     LS    DD   P R R+L DI  +   V+L    D E 
Sbjct: 735  DRSEHTPTPGSTSTHSAEVEASLSTAGSDDG--PLRYRSLADIMLEAPRVDLVDEEDGEA 792

Query: 168  YLMGVEEPANFKQAVKDREWRKAMEKEIESIEKNNTWELSTLPTGQKVIGLKWIFKLKKD 347
             L   EEP+++++A  +  W  AM+KE+E+IEKN+TW L TLP G K IGLKW+F+LKK+
Sbjct: 793  LLAETEEPSSYREAAGEPAWVDAMQKELEAIEKNSTWSLCTLPVGHKAIGLKWVFELKKN 852

Query: 348  ADG 356
              G
Sbjct: 853  TTG 855


>gb|AAR96231.1| putative integrase [Oryza sativa Japonica Group]
           gi|108708487|gb|ABF96282.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1094

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +3

Query: 99  PRRTRNLTDIYNDTEEVELD-EELYLMGVEEPANFKQAVKDREWRKAMEKEIESIEKNNT 275
           PRR R++ +I + T  VELD +ELYL   +EPAN  +A +D  WR+AM+ EI+SIE+N+T
Sbjct: 656 PRRYRSMANILDTTALVELDSDELYLAVAKEPANLTEAEQDEHWRQAMQDEIKSIEENST 715

Query: 276 WELSTLPTGQKVIGLKWIFKLKKDADG 356
           W L+ LP G+  I LKW+FKL K+  G
Sbjct: 716 WILTELPAGKCPIDLKWVFKLNKNETG 742


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
 Frame = +3

Query: 30   LATPETQLHGSRLSPENYDDSTEPRRTRNLTDIYNDTEEVEL----DEELYLMGVEEPAN 197
            LA   T +  S LS    DD   P R R+L DI  +   V+L    D E  L   EEP++
Sbjct: 757  LAEQSTTVEAS-LSTAGSDDG--PLRYRSLADIMLEAPRVDLVDEEDGEALLAETEEPSS 813

Query: 198  FKQAVKDREWRKAMEKEIESIEKNNTWELSTLPTGQKVIGLKWIFKLKKDADG 356
            +++A  +  W  AM+KE+E+IEKN+TW L TLP G K IGLKW+F+LKK+  G
Sbjct: 814  YREAAGEPAWVDAMQKELEAIEKNSTWSLCTLPVGHKAIGLKWVFELKKNTTG 866