BLASTX nr result

ID: Angelica22_contig00007286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007286
         (1982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...   232   1e-98
ref|XP_002306512.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-96
gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]    215   5e-94
ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana] g...   215   5e-94
ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp....   216   5e-94

>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  232 bits (591), Expect(2) = 1e-98
 Identities = 127/198 (64%), Positives = 148/198 (74%), Gaps = 12/198 (6%)
 Frame = +2

Query: 1217 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXXLNAQSRALLMQKLDRSG 1396
            +LNGKLEIAGRTIKVSSVT+H G Q                  LNAQSRALLMQKLDR+G
Sbjct: 184  ALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTG 243

Query: 1397 TVTSFARA---PVVNGSAPVQQSISVPING------AALPMLPLIA---EPIGIPSECLL 1540
            T TS A +   P++NGSAP QQ+IS+P+NG      AA P L L +   E IG PSECLL
Sbjct: 244  TATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPSECLL 303

Query: 1541 LKNMFDPATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQ 1720
            LKNMFDPATE +PDFD+DIKEDV EECS +G VKHI VDKNSAG+VYL+FD++E A+RAQ
Sbjct: 304  LKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEAAARAQ 363

Query: 1721 QAMHRRWFAQRSISAIFL 1774
            +AMH RWFA+RSI AIF+
Sbjct: 364  RAMHMRWFARRSILAIFM 381



 Score =  157 bits (396), Expect(2) = 1e-98
 Identities = 82/113 (72%), Positives = 87/113 (76%)
 Frame = +1

Query: 871  QVRDVRLIMDRNSSRSKGVGYIEFYDAMSVPMSIALSGHLLLGQPVMVKPSEAEKNLVQX 1050
            +VRDVRLIMDRNS RSKGVGY+EFYDAMSVPM+I LSG LLLGQPVMVKPSEAEKNLVQ 
Sbjct: 46   KVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQP 105

Query: 1051 XXXXXXXXXXXXXXXXXERKLYVGNLHFNMTEFQL*QIFEAFGPVELVQLPTD 1209
                             +RKLYVGNLHFNMTE QL Q+FE FG VELVQLP D
Sbjct: 106  SASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLD 158


>ref|XP_002306512.1| predicted protein [Populus trichocarpa] gi|222855961|gb|EEE93508.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  224 bits (570), Expect(2) = 2e-96
 Identities = 124/208 (59%), Positives = 148/208 (71%), Gaps = 12/208 (5%)
 Frame = +2

Query: 1217 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXXLNAQSRALLMQKLDRSG 1396
            +LNGKLEIAGRTIKVSSVT+H G Q                  LNAQSRALLMQKLDR+G
Sbjct: 157  ALNGKLEIAGRTIKVSSVTEHGGQQDTGAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 216

Query: 1397 TVTSFARA---PVVNGSAPVQQSISVPING------AALPMLPLIA---EPIGIPSECLL 1540
              TS A +   P++NGSA  QQ+IS+PI G      AALP   L +   EPIG PSECL+
Sbjct: 217  IATSIAGSLGVPLLNGSASNQQAISLPIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLM 276

Query: 1541 LKNMFDPATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQ 1720
            LKNMFDPATE +PDFD+DIKEDV EECS +G V+HI VDKNS G VYLRF ++E A+ AQ
Sbjct: 277  LKNMFDPATETEPDFDLDIKEDVEEECSKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQ 336

Query: 1721 QAMHRRWFAQRSISAIFLQPYEYDAKFK 1804
            +AMH RWFA+R I A+F+   EY+A+F+
Sbjct: 337  RAMHMRWFARRLILAVFMPTREYEARFQ 364



 Score =  157 bits (398), Expect(2) = 2e-96
 Identities = 82/113 (72%), Positives = 87/113 (76%)
 Frame = +1

Query: 871  QVRDVRLIMDRNSSRSKGVGYIEFYDAMSVPMSIALSGHLLLGQPVMVKPSEAEKNLVQX 1050
            +VRDVRLIMDRNS RSKGVGY+EFYDAMSVPM+IALSG LL GQPVMVKPSEAEKNLVQ 
Sbjct: 19   KVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQPVMVKPSEAEKNLVQS 78

Query: 1051 XXXXXXXXXXXXXXXXXERKLYVGNLHFNMTEFQL*QIFEAFGPVELVQLPTD 1209
                             +RKLYVGNLHFNMTE QL Q+FE FG VELVQLP D
Sbjct: 79   SASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPFGTVELVQLPLD 131


>gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
          Length = 527

 Score =  215 bits (548), Expect(2) = 5e-94
 Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 6/202 (2%)
 Frame = +2

Query: 1217 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXXLNAQSRALLMQKLDRSG 1396
            +LNGKLEIAGRTIKVSSV+DH+G Q                  LNAQSRA+LMQKLDRSG
Sbjct: 325  ALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSG 384

Query: 1397 TVTSFARA---PVVNGSAPVQQSISVPINGAALPMLPL---IAEPIGIPSECLLLKNMFD 1558
              TS   +   P +NG+A  Q  ++     + LP   +   + E +G+PSECLLLKNMFD
Sbjct: 385  IATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFD 444

Query: 1559 PATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQQAMHRR 1738
            PATE +P+FD++I++DV +ECS +G V HI+VDKNSAG+VYLRF +VE A+ AQ+AMH R
Sbjct: 445  PATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMR 504

Query: 1739 WFAQRSISAIFLQPYEYDAKFK 1804
            WFAQ+ ISA F+ P+EY+AK K
Sbjct: 505  WFAQKMISATFMPPHEYEAKAK 526



 Score =  157 bits (398), Expect(2) = 5e-94
 Identities = 84/114 (73%), Positives = 88/114 (77%)
 Frame = +1

Query: 871  QVRDVRLIMDRNSSRSKGVGYIEFYDAMSVPMSIALSGHLLLGQPVMVKPSEAEKNLVQX 1050
            +VRDVRLIMDRNS RSKGVGYIEFYD MSVPM+IALSG L LGQPVMVKPSEAEKNL Q 
Sbjct: 193  KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQ- 251

Query: 1051 XXXXXXXXXXXXXXXXXERKLYVGNLHFNMTEFQL*QIFEAFGPVELVQLPTDP 1212
                             +RKLYVGNLHFNM+E QL QIFEAFGPVELVQLP DP
Sbjct: 252  -----SNSTTVGGTGPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDP 300


>ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
            gi|15451046|gb|AAK96794.1| splicing factor-like protein
            [Arabidopsis thaliana] gi|332004077|gb|AED91460.1|
            RNA-binding protein 39 [Arabidopsis thaliana]
          Length = 527

 Score =  215 bits (548), Expect(2) = 5e-94
 Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 6/202 (2%)
 Frame = +2

Query: 1217 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXXLNAQSRALLMQKLDRSG 1396
            +LNGKLEIAGRTIKVSSV+DH+G Q                  LNAQSRA+LMQKLDRSG
Sbjct: 325  ALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSG 384

Query: 1397 TVTSFARA---PVVNGSAPVQQSISVPINGAALPMLPL---IAEPIGIPSECLLLKNMFD 1558
              TS   +   P +NG+A  Q  ++     + LP   +   + E +G+PSECLLLKNMFD
Sbjct: 385  IATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFD 444

Query: 1559 PATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQQAMHRR 1738
            PATE +P+FD++I++DV +ECS +G V HI+VDKNSAG+VYLRF +VE A+ AQ+AMH R
Sbjct: 445  PATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMR 504

Query: 1739 WFAQRSISAIFLQPYEYDAKFK 1804
            WFAQ+ ISA F+ P+EY+AK K
Sbjct: 505  WFAQKMISATFMPPHEYEAKAK 526



 Score =  157 bits (398), Expect(2) = 5e-94
 Identities = 84/114 (73%), Positives = 88/114 (77%)
 Frame = +1

Query: 871  QVRDVRLIMDRNSSRSKGVGYIEFYDAMSVPMSIALSGHLLLGQPVMVKPSEAEKNLVQX 1050
            +VRDVRLIMDRNS RSKGVGYIEFYD MSVPM+IALSG L LGQPVMVKPSEAEKNL Q 
Sbjct: 193  KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQ- 251

Query: 1051 XXXXXXXXXXXXXXXXXERKLYVGNLHFNMTEFQL*QIFEAFGPVELVQLPTDP 1212
                             +RKLYVGNLHFNM+E QL QIFEAFGPVELVQLP DP
Sbjct: 252  -----SNSTTVGGTGPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDP 300


>ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319265|gb|EFH49687.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score =  216 bits (551), Expect(2) = 5e-94
 Identities = 116/202 (57%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
 Frame = +2

Query: 1217 SLNGKLEIAGRTIKVSSVTDHVGAQXXXXXXXXXXXXXXXXXXLNAQSRALLMQKLDRSG 1396
            SLNGKLEIAGRTIKVSSV+DH+G Q                  LNAQSRALLMQKLDRSG
Sbjct: 318  SLNGKLEIAGRTIKVSSVSDHIGTQDAAPKSADFDDDDGGGLALNAQSRALLMQKLDRSG 377

Query: 1397 TVTSFARA---PVVNGSAPVQQSISVPINGAALPMLPL---IAEPIGIPSECLLLKNMFD 1558
              TS   +   P +NG+A  Q  ++       LP   +   + EP+G PSECLLLKNMFD
Sbjct: 378  IATSIVGSLGVPGLNGAAFNQPGMNPSFPTPVLPTTAIPSFVNEPVGQPSECLLLKNMFD 437

Query: 1559 PATEEDPDFDMDIKEDVYEECSNHGHVKHIHVDKNSAGYVYLRFDTVEGASRAQQAMHRR 1738
            PATE + DFD +I+EDV +ECS +G V HI+VDKNSAG+VYLRF +VE A  AQ+AMH R
Sbjct: 438  PATETERDFDFEIREDVADECSKYGEVNHIYVDKNSAGFVYLRFQSVEAAVAAQRAMHMR 497

Query: 1739 WFAQRSISAIFLQPYEYDAKFK 1804
            WFAQ+ ISA F+ P+EY+AK K
Sbjct: 498  WFAQKMISATFMPPHEYEAKAK 519



 Score =  156 bits (395), Expect(2) = 5e-94
 Identities = 84/114 (73%), Positives = 87/114 (76%)
 Frame = +1

Query: 871  QVRDVRLIMDRNSSRSKGVGYIEFYDAMSVPMSIALSGHLLLGQPVMVKPSEAEKNLVQX 1050
            +VRDVRLIMDRNS RSKGVGYIEFYD MSVPM+IALSG   LGQPVMVKPSEAEKNL Q 
Sbjct: 187  KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPFLGQPVMVKPSEAEKNLAQ- 245

Query: 1051 XXXXXXXXXXXXXXXXXERKLYVGNLHFNMTEFQL*QIFEAFGPVELVQLPTDP 1212
                             +RKLYVGNLHFNMTE QL QIFEAFGPVELVQLP DP
Sbjct: 246  ------SNTTPGGTGPVDRKLYVGNLHFNMTELQLRQIFEAFGPVELVQLPLDP 293


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