BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007175
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...    88   3e-15
emb|CBI40014.3| unnamed protein product [Vitis vinifera]               80   5e-13
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...    80   5e-13
ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
emb|CAB83106.1| sigma factor 2 [Sinapis alba]                          59   2e-06

>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = -1

Query: 689 MSCLLPQFRCLPDSFSFHFKPHHHQTSSLP--LKYKEPIYFRAQCSATVTTVLYLPSLED 516
           MSCLLPQF+C PD+FS HF+ ++   S++    K +EPIY+RAQC  + T          
Sbjct: 2   MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTT---------- 51

Query: 515 HPNPVAANRPGSPSTSTVVLDLEKLHFASLGVHSNFAATNSPWTYFT 375
                      SPSTST VLDLEKL   S    S+  A NSPWTY T
Sbjct: 52  -----------SPSTSTAVLDLEKLRLPSFEAPSDSIAPNSPWTYAT 87


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 46/112 (41%), Positives = 59/112 (52%)
 Frame = -1

Query: 689 MSCLLPQFRCLPDSFSFHFKPHHHQTSSLPLKYKEPIYFRAQCSATVTTVLYLPSLEDHP 510
           MSCLLPQF+C PD+FS H K H      +  K +E IYFR QC+ + T+           
Sbjct: 1   MSCLLPQFKCPPDTFSTHPKLH------ILSKNREAIYFRVQCALSTTS----------- 43

Query: 509 NPVAANRPGSPSTSTVVLDLEKLHFASLGVHSNFAATNSPWTYFTDIDPATE 354
                  P   +++T VLD+EKL   SL  HSN  A + PWTY   + P TE
Sbjct: 44  -------PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTE 88


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 47/112 (41%), Positives = 59/112 (52%)
 Frame = -1

Query: 689 MSCLLPQFRCLPDSFSFHFKPHHHQTSSLPLKYKEPIYFRAQCSATVTTVLYLPSLEDHP 510
           MSCLLPQF+C PD+FS H  P  H     P K +E IYFR QC+ + T+           
Sbjct: 1   MSCLLPQFKCPPDTFSTH--PKLHILCKSP-KNREAIYFRVQCALSTTS----------- 46

Query: 509 NPVAANRPGSPSTSTVVLDLEKLHFASLGVHSNFAATNSPWTYFTDIDPATE 354
                  P   +++T VLD+EKL   SL  HSN  A + PWTY   + P TE
Sbjct: 47  -------PPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTE 91


>ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|222862330|gb|EEE99836.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/112 (41%), Positives = 52/112 (46%)
 Frame = -1

Query: 689 MSCLLPQFRCLPDSFSFHFKPHHHQTSSLPLKYKEPIYFRAQCSATVTTVLYLPSLEDHP 510
           MSCLLPQF+C PDSFS H                EP  FRAQC+ +              
Sbjct: 1   MSCLLPQFKCQPDSFSIHSNG-------------EPFCFRAQCALS-------------- 33

Query: 509 NPVAANRPGSPSTSTVVLDLEKLHFASLGVHSNFAATNSPWTYFTDIDPATE 354
                    SPSTST VL+LEKL   SL  HS+  A N PWTY   I P  E
Sbjct: 34  -------SASPSTSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKE 78


>emb|CAB83106.1| sigma factor 2 [Sinapis alba]
          Length = 575

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 36/111 (32%), Positives = 49/111 (44%)
 Frame = -1

Query: 686 SCLLPQFRCLPDSFSFHFKPHHHQTSSLPLKYKEPIYFRAQCSATVTTVLYLPSLEDHPN 507
           SCLLP F+C PDSFS HF+  +    S+    K   +F+ QC+ +               
Sbjct: 3   SCLLPNFKCQPDSFSVHFRTSY----SVSKHSKGSAFFQPQCAVST-------------- 44

Query: 506 PVAANRPGSPSTSTVVLDLEKLHFASLGVHSNFAATNSPWTYFTDIDPATE 354
                   SP   T  LD+ KL   S    S+   ++ PWTY   I P+TE
Sbjct: 45  --------SPPLLTSTLDVAKLRLPSFDTDSDSRISDRPWTYTRTIGPSTE 87