BLASTX nr result

ID: Angelica22_contig00007106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007106
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   416   e-114
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   412   e-113
ref|XP_004152425.1| PREDICTED: DNA mismatch repair protein MSH4-...   412   e-113
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   400   e-109

>ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1|
            predicted protein [Populus trichocarpa]
          Length = 700

 Score =  422 bits (1086), Expect = e-116
 Identities = 207/263 (78%), Positives = 234/263 (88%)
 Frame = -2

Query: 1002 SVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFATLRAV 823
            S+HN+F+PNN+FLSEASN+VIVMGPNMSGKSTYLQQVCLIVILAQIGCY+PA F+T+R V
Sbjct: 438  SIHNDFVPNNIFLSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTIRVV 497

Query: 822  DRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGFAIARS 643
            DRIFTRMG+ DNLESNSSTFMTEMKETAF+MQNVS+ SLI MDELGRATSS+DGFAIA S
Sbjct: 498  DRIFTRMGSVDNLESNSSTFMTEMKETAFIMQNVSQSSLIFMDELGRATSSADGFAIAWS 557

Query: 642  CCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGLRHVPH 463
            CCEHLLSLKAY+IFATHM+NLSELAT+YPNV+I+HFHVD+K+NRLDFKFQL+DG RHVPH
Sbjct: 558  CCEHLLSLKAYSIFATHMENLSELATIYPNVRIVHFHVDIKSNRLDFKFQLEDGPRHVPH 617

Query: 462  YXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLICLKYS 283
            Y            SVIE ARSITS+IT K+ K+ EVN  QYH +Q  YRVAQ+LICLK+S
Sbjct: 618  YGLLLAEVAGLPSSVIEMARSITSKITEKQTKQTEVNCRQYHQLQMVYRVAQRLICLKHS 677

Query: 282  SQDEDSIRQALQNLKESYINGTL 214
            +QDEDSIRQALQNLKE YINGTL
Sbjct: 678  NQDEDSIRQALQNLKEQYINGTL 700


>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
            gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
            mutS, putative [Ricinus communis]
          Length = 553

 Score =  416 bits (1070), Expect = e-114
 Identities = 207/263 (78%), Positives = 231/263 (87%)
 Frame = -2

Query: 1002 SVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFATLRAV 823
            S+HN+F+PNNLF+SEASN+VIVMGPNMSGKSTYLQQVCLIVILAQIGCY+PA F T+R V
Sbjct: 291  SIHNDFVPNNLFVSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFLTIRIV 350

Query: 822  DRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGFAIARS 643
            DRIFTRMG+ DNLESNSSTFMTEMKETAF+MQNVS+RSLI+MDELGRATSSSDGF+IA S
Sbjct: 351  DRIFTRMGSVDNLESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGFSIAWS 410

Query: 642  CCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGLRHVPH 463
            CCEHLLSLKAYTIFATHM+NLSELAT+YPNVK+LH  V VKNNRLDFKFQLKDG RHVPH
Sbjct: 411  CCEHLLSLKAYTIFATHMENLSELATIYPNVKLLHLDVTVKNNRLDFKFQLKDGPRHVPH 470

Query: 462  YXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLICLKYS 283
            Y            SVIETARSITS+I  KE+ +MEV+  QY  +Q  Y VAQ+LICLKYS
Sbjct: 471  YGLLLAEVAGLPSSVIETARSITSKIKEKEITQMEVHCHQYRQLQMIYHVAQRLICLKYS 530

Query: 282  SQDEDSIRQALQNLKESYINGTL 214
            SQDEDSIRQALQNLKESY++G +
Sbjct: 531  SQDEDSIRQALQNLKESYMDGKI 553


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  412 bits (1058), Expect = e-113
 Identities = 199/263 (75%), Positives = 233/263 (88%)
 Frame = -2

Query: 1002 SVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFATLRAV 823
            S+HN+F+ N++FLSEASN++IVMGPNMSGKSTYLQQ+CL+VILAQIGCY+PA+F+TLR V
Sbjct: 508  SIHNDFVANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVV 567

Query: 822  DRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGFAIARS 643
            DRIFTRMGT D+LESNSSTFMTEMKETAF+MQNVS+RSL+V+DELGRATSSSDGFAIA S
Sbjct: 568  DRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWS 627

Query: 642  CCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGLRHVPH 463
            CCE+LL+LKAYTIFATHM+ LSELAT+YPNVKILHFHVD++N+RLDFKFQLKDG+RHVPH
Sbjct: 628  CCEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGIRHVPH 687

Query: 462  YXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLICLKYS 283
            Y            SVIETAR ITS+I  KE +RME+N  QYH I+  Y VAQ+LICLKYS
Sbjct: 688  YGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLICLKYS 747

Query: 282  SQDEDSIRQALQNLKESYINGTL 214
            S DEDS+R+AL+NLKE YI+G L
Sbjct: 748  SHDEDSVREALRNLKEGYISGRL 770


>ref|XP_004152425.1| PREDICTED: DNA mismatch repair protein MSH4-like [Cucumis sativus]
          Length = 601

 Score =  412 bits (1058), Expect = e-113
 Identities = 199/263 (75%), Positives = 233/263 (88%)
 Frame = -2

Query: 1002 SVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFATLRAV 823
            S+HN+F+ N++FLSEASN++IVMGPNMSGKSTYLQQ+CL+VILAQIGCY+PA+F+TLR V
Sbjct: 339  SIHNDFVANSIFLSEASNMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVV 398

Query: 822  DRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGFAIARS 643
            DRIFTRMGT D+LESNSSTFMTEMKETAF+MQNVS+RSL+V+DELGRATSSSDGFAIA S
Sbjct: 399  DRIFTRMGTDDSLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWS 458

Query: 642  CCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGLRHVPH 463
            CCE+LL+LKAYTIFATHM+ LSELAT+YPNVKILHFHVD++N+RLDFKFQLKDG+RHVPH
Sbjct: 459  CCEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGIRHVPH 518

Query: 462  YXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLICLKYS 283
            Y            SVIETAR ITS+I  KE +RME+N  QYH I+  Y VAQ+LICLKYS
Sbjct: 519  YGLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLICLKYS 578

Query: 282  SQDEDSIRQALQNLKESYINGTL 214
            S DEDS+R+AL+NLKE YI+G L
Sbjct: 579  SHDEDSVREALRNLKEGYISGRL 601


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  400 bits (1028), Expect = e-109
 Identities = 195/263 (74%), Positives = 227/263 (86%)
 Frame = -2

Query: 1002 SVHNEFIPNNLFLSEASNLVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPANFATLRAV 823
            S+HN+F+ NN+FL+EASN+ IVMGPNMSGKSTYLQQVCLIVILAQ+GCY+PA F+T+R V
Sbjct: 530  SIHNDFVANNIFLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTVRVV 589

Query: 822  DRIFTRMGTGDNLESNSSTFMTEMKETAFLMQNVSERSLIVMDELGRATSSSDGFAIARS 643
            DR+FTRMG  DNLESNSSTFMTEMKETAF+MQNVS+RSLIVMDELGRATSSSDGFAIA S
Sbjct: 590  DRMFTRMGAVDNLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWS 649

Query: 642  CCEHLLSLKAYTIFATHMDNLSELATVYPNVKILHFHVDVKNNRLDFKFQLKDGLRHVPH 463
            CCEHLLSLK YT+FATHM+N+SEL T+YPNVKILHF V++KNN LDFKFQLK+G + +PH
Sbjct: 650  CCEHLLSLKTYTVFATHMENISELVTMYPNVKILHFDVELKNNHLDFKFQLKEGSKRIPH 709

Query: 462  YXXXXXXXXXXXGSVIETARSITSQITSKEMKRMEVNSEQYHGIQKAYRVAQQLICLKYS 283
            Y            SV+ETAR ITS+I+ KE+KRMEVN  Q+H IQKAY VAQ+L+CLKY 
Sbjct: 710  YGLLLAEVAGLPSSVVETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLLCLKYC 769

Query: 282  SQDEDSIRQALQNLKESYINGTL 214
            +QDED+IRQAL+NLKES I   L
Sbjct: 770  NQDEDTIRQALRNLKESCIKEKL 792


Top