BLASTX nr result

ID: Angelica22_contig00007061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00007061
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   121   5e-26
dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         119   3e-25
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   118   4e-25
emb|CBI30649.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   113   1e-23

>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/84 (65%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   AESGLSMMVQYKHEPSKAWLFLKPFSPNMWLATFGILFYTMFIVWFFERKSNPEFKGAFR 180
           AESGLSM+V  K E S AW+F+KPF+  MWL T  IL YTMFIVWF E  +NPEFKG ++
Sbjct: 400 AESGLSMIVSAKSEES-AWMFMKPFTKEMWLVTGAILIYTMFIVWFLEHHTNPEFKGPWK 458

Query: 181 DQLGMALWFTFSTMFFAHREKVYS 252
           +Q+G ALWFTFS+++FAHREK+YS
Sbjct: 459 NQMGTALWFTFSSLYFAHREKIYS 482


>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/85 (62%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   AESGLSMMVQYKHEPSK-AWLFLKPFSPNMWLATFGILFYTMFIVWFFERKSNPEFKGAF 177
           AESGL+M+V  K + SK AW+FLKPF+ NMW+AT  +L YTM +VWF E +SNPEF+G +
Sbjct: 541 AESGLTMVVPVKFDKSKKAWMFLKPFTGNMWVATGSVLVYTMLVVWFMEHQSNPEFRGRW 600

Query: 178 RDQLGMALWFTFSTMFFAHREKVYS 252
           +DQLG A+WFTFS++FFAHRE + S
Sbjct: 601 KDQLGTAMWFTFSSLFFAHRENIKS 625


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/84 (61%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   AESGLSMMVQYKHEPSKAWLFLKPFSPNMWLATFGILFYTMFIVWFFERKSNPEFKGAFR 180
           AESGLSM+V  K++ S AW+F+KPF+  MWL T  +L YTMFIVWF E  +NPEF G ++
Sbjct: 545 AESGLSMIVPAKYKES-AWMFMKPFTKEMWLVTGAVLIYTMFIVWFLEHHTNPEFNGPWK 603

Query: 181 DQLGMALWFTFSTMFFAHREKVYS 252
           +Q+G ALWFTFS+++FAHREK+YS
Sbjct: 604 NQIGTALWFTFSSLYFAHREKIYS 627


>emb|CBI30649.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   AESGLSMMVQYK-HEPSKAWLFLKPFSPNMWLATFGILFYTMFIVWFFERKSNPEFKGAF 177
           AESGLSM+   K  E  KAWLF+KPF+  MW+ T  IL YTMFIVW  E ++NPEF+G++
Sbjct: 562 AESGLSMITPVKSREAYKAWLFMKPFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQGSW 621

Query: 178 RDQLGMALWFTFSTMFFAHREKVYS 252
           +DQLG  LWFTFS++FFAH+EK+ S
Sbjct: 622 KDQLGTTLWFTFSSLFFAHKEKINS 646


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   AESGLSMMVQYK-HEPSKAWLFLKPFSPNMWLATFGILFYTMFIVWFFERKSNPEFKGAF 177
           AESGLSM+   K  E  KAWLF+KPF+  MW+ T  IL YTMFIVW  E ++NPEF+G++
Sbjct: 554 AESGLSMITPVKSREAYKAWLFMKPFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQGSW 613

Query: 178 RDQLGMALWFTFSTMFFAHREKVYS 252
           +DQLG  LWFTFS++FFAH+EK+ S
Sbjct: 614 KDQLGTTLWFTFSSLFFAHKEKINS 638


Top