BLASTX nr result

ID: Angelica22_contig00006686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00006686
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17361.3| unnamed protein product [Vitis vinifera]              263   1e-67
ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   263   1e-67
ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-56
ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arab...   211   5e-52
ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain ...   210   6e-52

>emb|CBI17361.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  263 bits (671), Expect = 1e-67
 Identities = 135/260 (51%), Positives = 173/260 (66%), Gaps = 6/260 (2%)
 Frame = -3

Query: 1211 TFGIVHLKSLSTPFLDTPAKFSARINSSGICGALLVADPLDACSSLVNSVF--QFDYVKF 1038
            T+ IVHLKSLS  F+D PA+F+  +NS+GICGAL +ADPL+ACSSL+N     + D +KF
Sbjct: 81   TYAIVHLKSLSASFIDAPARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKF 140

Query: 1037 ALIVRGNCSFLQKVRNAQLAGFHGAIVFDHQVDKNLISMIGSPKGIWMPAVFVSNEAGET 858
            ALI+RG C+F  KVRNAQ AGFH  IV+D +   NL+SMIG+ +GIW+PAVFVS  AGET
Sbjct: 141  ALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGET 200

Query: 857  LMKHARGEDGECCIIS-SLTERSWN---XXXXXXXXXXXXXXXXXXXXXVRVYWRNQNRS 690
            L  +A+G++GECCII+ S  E +W                          R+  R  N  
Sbjct: 201  LKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPH 260

Query: 689  SNLVGGKLVELLPCSIFNATHMSGYMEKTCAICLQDFKDGDGLKILPCQHKFHANCVGSC 510
               V  KLVE+LPC  F+       +  TC+ICL+D+KDG+ L++LPCQH+FHA+CV S 
Sbjct: 261  RPSVDAKLVEVLPCFTFSQA-CECRVGDTCSICLEDYKDGERLRVLPCQHEFHASCVDSW 319

Query: 509  LTKWNTFCPVCKYDLKTEVT 450
            LTKW TFCPVCKYDL T+ T
Sbjct: 320  LTKWGTFCPVCKYDLSTDAT 339


>ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF167 [Vitis vinifera]
          Length = 294

 Score =  263 bits (671), Expect = 1e-67
 Identities = 135/260 (51%), Positives = 173/260 (66%), Gaps = 6/260 (2%)
 Frame = -3

Query: 1211 TFGIVHLKSLSTPFLDTPAKFSARINSSGICGALLVADPLDACSSLVNSVF--QFDYVKF 1038
            T+ IVHLKSLS  F+D PA+F+  +NS+GICGAL +ADPL+ACSSL+N     + D +KF
Sbjct: 23   TYAIVHLKSLSASFIDAPARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKF 82

Query: 1037 ALIVRGNCSFLQKVRNAQLAGFHGAIVFDHQVDKNLISMIGSPKGIWMPAVFVSNEAGET 858
            ALI+RG C+F  KVRNAQ AGFH  IV+D +   NL+SMIG+ +GIW+PAVFVS  AGET
Sbjct: 83   ALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGET 142

Query: 857  LMKHARGEDGECCIIS-SLTERSWN---XXXXXXXXXXXXXXXXXXXXXVRVYWRNQNRS 690
            L  +A+G++GECCII+ S  E +W                          R+  R  N  
Sbjct: 143  LKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPH 202

Query: 689  SNLVGGKLVELLPCSIFNATHMSGYMEKTCAICLQDFKDGDGLKILPCQHKFHANCVGSC 510
               V  KLVE+LPC  F+       +  TC+ICL+D+KDG+ L++LPCQH+FHA+CV S 
Sbjct: 203  RPSVDAKLVEVLPCFTFSQA-CECRVGDTCSICLEDYKDGERLRVLPCQHEFHASCVDSW 261

Query: 509  LTKWNTFCPVCKYDLKTEVT 450
            LTKW TFCPVCKYDL T+ T
Sbjct: 262  LTKWGTFCPVCKYDLSTDAT 281


>ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|222836734|gb|EEE75127.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  226 bits (576), Expect = 1e-56
 Identities = 124/274 (45%), Positives = 165/274 (60%), Gaps = 4/274 (1%)
 Frame = -3

Query: 1271 MRNLLVLALXXXXXXXXIKPTFGIVHLKSLSTPFLDTPAKFSARINSSGICGALLVADPL 1092
            MR  L L L        I+ +   V +K  S  F D PAK +  +N S +CG+L VA+PL
Sbjct: 1    MREGLFLILSLFYAIMIIEGSSATVLIKPSSISFPDLPAKSALSLNGSSVCGSLHVANPL 60

Query: 1091 DACSSLVNSVFQFDYVKFALIVRGNCSFLQKVRNAQLAGFHGAIVFDHQVDKNLISMIGS 912
            DACS L N     +  +FALIVRG C+F  K++NAQ AGF  AIVFD + ++NLI M+ +
Sbjct: 61   DACSPLRNRFEFNESGRFALIVRGECAFEDKIKNAQSAGFRAAIVFDDKDNRNLIYMMVN 120

Query: 911  PKGIWMPAVFVSNEAGETLMKHARGEDGECCIISSLTERSWNXXXXXXXXXXXXXXXXXX 732
            P+GI + AVFV+  AGE L   ARG++GECCI SS T+ +W                   
Sbjct: 121  PEGIKVHAVFVTKYAGEILKDRARGKEGECCIYSSRTDAAWTVLAISLISVVVILGLLIL 180

Query: 731  XXXVRVYWRNQNRSSN---LVGGKLVELLPCSIF-NATHMSGYMEKTCAICLQDFKDGDG 564
                  +W +  R++N    V  K+VE LPC  F NA+    ++ +TCAICL+D+KDG+ 
Sbjct: 181  VFVTPRHWLHWQRTNNRCKSVDSKMVEALPCFTFRNASLSQCHVGETCAICLEDYKDGEV 240

Query: 563  LKILPCQHKFHANCVGSCLTKWNTFCPVCKYDLK 462
            LK+LPC H+FH+ CV S LTKW TFCPVCK D+K
Sbjct: 241  LKVLPCHHEFHSTCVDSWLTKWGTFCPVCKLDMK 274


>ref|XP_002866771.1| hypothetical protein ARALYDRAFT_497000 [Arabidopsis lyrata subsp.
            lyrata] gi|297312606|gb|EFH43030.1| hypothetical protein
            ARALYDRAFT_497000 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  211 bits (536), Expect = 5e-52
 Identities = 113/257 (43%), Positives = 151/257 (58%), Gaps = 9/257 (3%)
 Frame = -3

Query: 1199 VHLKSLSTPFLDTPAKFSARINSSGICGALLVADPLDACSSLVNSVF----QFDYVKFAL 1032
            V L S+S  F D PAKF   +  +GICGAL VADPLD CS L+++      Q    KFAL
Sbjct: 27   VVLNSISASFADLPAKFDGSVTKNGICGALYVADPLDGCSPLLHAAASNWTQQSTTKFAL 86

Query: 1031 IVRGNCSFLQKVRNAQLAGFHGAIVFDHQVDKNLISMIGSPKGIWMPAVFVSNEAGETLM 852
            I+RG CSF  K+ NAQ +GF   IV+D+  +++LI M  +P+ I + AVFVSN AGE L 
Sbjct: 87   IIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILR 146

Query: 851  KHARGEDGECCIISSLTERSWNXXXXXXXXXXXXXXXXXXXXXVR---VYWRNQNRSSNL 681
            K+ARG DGECC+       +W                             WR ++  +  
Sbjct: 147  KYARGRDGECCLYPPTKGSAWTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHNRTIR 206

Query: 680  VGGKLVELLPCSIF--NATHMSGYMEKTCAICLQDFKDGDGLKILPCQHKFHANCVGSCL 507
            +  KLV  LPC  F  +A H +G   +TCAICL+D++ G+ L++LPCQH FH +C+ S L
Sbjct: 207  LDAKLVHTLPCFTFTDSAHHKAG---ETCAICLEDYRFGESLRLLPCQHAFHLSCIDSWL 263

Query: 506  TKWNTFCPVCKYDLKTE 456
            TKW T CPVCK+D++TE
Sbjct: 264  TKWGTSCPVCKHDIRTE 280


>ref|NP_975001.1| receptor homology-transmembrane-ring H2 domain protein 1 [Arabidopsis
            thaliana] gi|332010783|gb|AED98166.1| receptor
            homology-transmembrane-ring H2 domain protein 1
            [Arabidopsis thaliana]
          Length = 290

 Score =  210 bits (535), Expect = 6e-52
 Identities = 114/257 (44%), Positives = 151/257 (58%), Gaps = 9/257 (3%)
 Frame = -3

Query: 1199 VHLKSLSTPFLDTPAKFSARINSSGICGALLVADPLDACSSLVNSVF----QFDYVKFAL 1032
            V L S+S  F D PAKF   +  +GICGAL VADPLD CS L+++      Q    KFAL
Sbjct: 27   VVLNSISASFADLPAKFDGSVTKNGICGALYVADPLDGCSPLLHAAASNWTQHRTTKFAL 86

Query: 1031 IVRGNCSFLQKVRNAQLAGFHGAIVFDHQVDKNLISMIGSPKGIWMPAVFVSNEAGETLM 852
            I+RG CSF  K+ NAQ +GF   IV+D+  +++LI M  +P+ I + AVFVSN AGE L 
Sbjct: 87   IIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLIVMKVNPQDITVDAVFVSNVAGEILR 146

Query: 851  KHARGEDGECCIISSLTERSWNXXXXXXXXXXXXXXXXXXXXXVR---VYWRNQNRSSNL 681
            K+ARG DGECC+       +W                             WR ++  +  
Sbjct: 147  KYARGRDGECCLNPPDRGSAWTVLAISFFSLLLIVTFLLIAFFAPRHWTQWRGRHTRTIR 206

Query: 680  VGGKLVELLPCSIF--NATHMSGYMEKTCAICLQDFKDGDGLKILPCQHKFHANCVGSCL 507
            +  KLV  LPC  F  +A H +G   +TCAICL+D++ G+ L++LPCQH FH NC+ S L
Sbjct: 207  LDAKLVHTLPCFTFTDSAHHKAG---ETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWL 263

Query: 506  TKWNTFCPVCKYDLKTE 456
            TKW T CPVCK+D++TE
Sbjct: 264  TKWGTSCPVCKHDIRTE 280


Top