BLASTX nr result

ID: Angelica22_contig00006498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00006498
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43952.1|AC012188_29 Contains similarity to an Alfalfa nucl...   211   4e-53
ref|NP_172903.1| protein alfin-like 7 [Arabidopsis thaliana] gi|...   211   4e-53
gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]       209   2e-52
ref|XP_002892811.1| PHD finger family protein [Arabidopsis lyrat...   209   2e-52
ref|XP_003550325.1| PREDICTED: PHD finger protein Alfin1-like is...   206   1e-51

>gb|AAF43952.1|AC012188_29 Contains similarity to an Alfalfa nucleic acid binding protein from
           Medicago sativa gb|L07291.1 and contains a PHD-finger
           PF|00628 domain. ESTs gb|AI995787, gb|AA721930,
           gb|T42258 come from this gene [Arabidopsis thaliana]
          Length = 273

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/155 (65%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   MQEKDWLSLVAVHSDSWLISVAFYFGARFGFGKNDRKRLFQMITELPTVYEVVTGSAKQS 182
           MQEKDW+SLVAVHSDSWLISVAFYFGARFGFGKN+RKRLFQMI +LPT++EVVTG+AKQS
Sbjct: 106 MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 165

Query: 183 KDH-ARXXXXXXXXXXXXXXTFESHPKA-RMAPPPNXXXXXXXXXXXXXXXTTCGACGDN 356
           KD  A                 ESH KA +M+PPP                  CGACGDN
Sbjct: 166 KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDEDEDDEQGAVCGACGDN 225

Query: 357 YAADEFWICCDVCERWFHGKCVKITPAKAEHIKQY 461
           Y  DEFWICCD CE+WFHGKCVKITPAKAEHIK Y
Sbjct: 226 YGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHY 260


>ref|NP_172903.1| protein alfin-like 7 [Arabidopsis thaliana]
           gi|75245845|sp|Q8LA16.1|ALFL7_ARATH RecName: Full=PHD
           finger protein ALFIN-LIKE 7; Short=Protein AL7
           gi|21593666|gb|AAM65633.1| nucleic acid binding protein
           (alfin-1), putative [Arabidopsis thaliana]
           gi|30017229|gb|AAP12848.1| At1g14510 [Arabidopsis
           thaliana] gi|110736110|dbj|BAF00027.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332191052|gb|AEE29173.1| protein alfin-like 7
           [Arabidopsis thaliana]
          Length = 252

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/155 (65%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   MQEKDWLSLVAVHSDSWLISVAFYFGARFGFGKNDRKRLFQMITELPTVYEVVTGSAKQS 182
           MQEKDW+SLVAVHSDSWLISVAFYFGARFGFGKN+RKRLFQMI +LPT++EVVTG+AKQS
Sbjct: 85  MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144

Query: 183 KDH-ARXXXXXXXXXXXXXXTFESHPKA-RMAPPPNXXXXXXXXXXXXXXXTTCGACGDN 356
           KD  A                 ESH KA +M+PPP                  CGACGDN
Sbjct: 145 KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGDEDEDDEQGAVCGACGDN 204

Query: 357 YAADEFWICCDVCERWFHGKCVKITPAKAEHIKQY 461
           Y  DEFWICCD CE+WFHGKCVKITPAKAEHIK Y
Sbjct: 205 YGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHY 239


>gb|AEF79998.1| PHD finger family protein [Corylus heterophylla]
          Length = 253

 Score =  209 bits (532), Expect = 2e-52
 Identities = 99/157 (63%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   MQEKDWLSLVAVHSDSWLISVAFYFGARFGFGKNDRKRLFQMITELPTVYEVVTGSAKQS 182
           MQEKDWLSLVAVHSDSWL++VAFYFGARFGFGKN+RKRLFQMI +LPT++EVVTG+ KQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNVKQS 144

Query: 183 KDHARXXXXXXXXXXXXXXTFESHPK---ARMAPPP-NXXXXXXXXXXXXXXXTTCGACG 350
           KD +               + +S P+    +M+PPP                  TCGACG
Sbjct: 145 KDQSATHNSSKSKLSGKTQSRQSEPQPKGVKMSPPPKEEDESGEEDEEDDEQGATCGACG 204

Query: 351 DNYAADEFWICCDVCERWFHGKCVKITPAKAEHIKQY 461
           DNY  DEFWICCD+CERWFHGKCVKITPAKAEHIKQY
Sbjct: 205 DNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQY 241


>ref|XP_002892811.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338653|gb|EFH69070.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  209 bits (532), Expect = 2e-52
 Identities = 100/155 (64%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   MQEKDWLSLVAVHSDSWLISVAFYFGARFGFGKNDRKRLFQMITELPTVYEVVTGSAKQS 182
           MQEKDW+SLVAVHSDSWLISVAFYFGARFGFGKN+RKRLFQMI +LPT++EVVTG+AKQS
Sbjct: 85  MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144

Query: 183 KDH-ARXXXXXXXXXXXXXXTFESHPKA-RMAPPPNXXXXXXXXXXXXXXXTTCGACGDN 356
           KD  A                 ++H KA +M+PPP                  CGACGDN
Sbjct: 145 KDQSANHNSSRSKSSSGKPRHSDTHTKASKMSPPPREEDESGDEEEDDEQGAVCGACGDN 204

Query: 357 YAADEFWICCDVCERWFHGKCVKITPAKAEHIKQY 461
           Y  DEFWICCD CE+WFHGKCVKITPAKAEHIK Y
Sbjct: 205 YGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHY 239


>ref|XP_003550325.1| PREDICTED: PHD finger protein Alfin1-like isoform 1 [Glycine max]
          Length = 253

 Score =  206 bits (525), Expect = 1e-51
 Identities = 98/157 (62%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   MQEKDWLSLVAVHSDSWLISVAFYFGARFGFGKNDRKRLFQMITELPTVYEVVTGSAKQS 182
           MQEKDWLSLVAVHSDSWL++VAFYFGARFGFGKN+RKRLFQMI +LPT++E+VTGSA+QS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFELVTGSARQS 144

Query: 183 KDHARXXXXXXXXXXXXXXTFESHPKAR----MAPPPNXXXXXXXXXXXXXXXTTCGACG 350
           KD                 + +S  +A+     APP                  TCGACG
Sbjct: 145 KDQPAAHNNGSKCKSSGKVSRQSESQAKGMKMSAPPKEEDESGEEEEEDDEQGATCGACG 204

Query: 351 DNYAADEFWICCDVCERWFHGKCVKITPAKAEHIKQY 461
           DNY  DEFWICCD+CERWFHGKCVKITPAKAEHIKQY
Sbjct: 205 DNYGTDEFWICCDMCERWFHGKCVKITPAKAEHIKQY 241


Top