BLASTX nr result

ID: Angelica22_contig00006398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00006398
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   183   3e-44
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   141   8e-32
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...   109   5e-22
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar...    93   3e-17

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score =  183 bits (464), Expect = 3e-44
 Identities = 99/211 (46%), Positives = 127/211 (60%), Gaps = 9/211 (4%)
 Frame = +1

Query: 19  MGEGHFSYQEEVYGGSQKRPYHGGGAISALAEDEMVGEDDEYDDLYNDVNVGEGFLQLQR 198
           M E    Y++E YGG+QK P+ GGGAISALA+DE++GEDDEYDDLYNDVNVGEGFLQ+ R
Sbjct: 1   MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 199 ---PGSSVGVMNTPFHTQKTTAPKPTTENFVTNEFNIHGVPTDGKFINAGFPQAKERLTS 369
              P  S  +   PF   KT  P    E   +    I GV  +GK+ N  F + KE   +
Sbjct: 61  SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMA 120

Query: 370 EVGPDSGLM------NVLGKTSGLNMTHDTQALNSGFRGSASVAQKNGVDSANLSSKVAN 531
             GP+ G        +V  K   L MTHDTQ  N GF+GS  + QK G + +++  K+AN
Sbjct: 121 VKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIAN 180

Query: 532 EFMPLLNPNTGAQRGVSQIPSSQMNVNVNMN 624
           E  P+LN  TG  R V Q+ S+QM +NVN+N
Sbjct: 181 ESTPVLNSGTGGPRAVPQMLSNQMGMNVNVN 211


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  163 bits (413), Expect = 2e-38
 Identities = 90/192 (46%), Positives = 115/192 (59%), Gaps = 9/192 (4%)
 Frame = +1

Query: 76  PYHGGGAISALAEDEMVGEDDEYDDLYNDVNVGEGFLQLQR---PGSSVGVMNTPFHTQK 246
           P+ GGGAISALA+DE++GEDDEYDDLYNDVNVGEGFLQ+ R   P  S  +   PF   K
Sbjct: 2   PFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAHK 61

Query: 247 TTAPKPTTENFVTNEFNIHGVPTDGKFINAGFPQAKERLTSEVGPDSGLM------NVLG 408
           T  P    E   +    I GV  +GK+ N  F + KE   +  GP+ G        +V  
Sbjct: 62  TDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPSVSQ 121

Query: 409 KTSGLNMTHDTQALNSGFRGSASVAQKNGVDSANLSSKVANEFMPLLNPNTGAQRGVSQI 588
           K   L MTHDTQ  N GF+GS  + QK G + +++  K+ANE  P+LN  TG  R V Q+
Sbjct: 122 KGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQM 181

Query: 589 PSSQMNVNVNMN 624
            S+QM +NVN+N
Sbjct: 182 LSNQMGMNVNVN 193


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score =  141 bits (356), Expect = 8e-32
 Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 10/212 (4%)
 Frame = +1

Query: 19  MGEGHFSYQEEVYGGSQKRPYHGGGAISALAEDEMVGEDDEYDDLYNDVNVGEGFLQLQR 198
           M +    Y++E YGG+QK  Y G GAI ALAE+EM GEDDEYDDLYNDVN+GE FLQ+ R
Sbjct: 1   MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNIGENFLQMHR 59

Query: 199 ---PGSSVGVMNTPFHTQKTTAPKPTTENFVTNEFNIHGVPTDGKF-INAGFPQAKERLT 366
              P +   V N  F  + +   +   E+  +   NI GV  + K+     FP+   +  
Sbjct: 60  SEAPPAPPSVGNGGFQPRNSNDLR--VESGGSQGLNIPGVAVESKYSTGTHFPEQNVK-- 115

Query: 367 SEVGPDSGLM------NVLGKTSGLNMTHDTQALNSGFRGSASVAQKNGVDSANLSSKVA 528
              GP+ G +      ++  KT  + MT+D+QA N GF+GS S     GVD +++++K++
Sbjct: 116 ---GPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKIS 172

Query: 529 NEFMPLLNPNTGAQRGVSQIPSSQMNVNVNMN 624
           N+  P+  PN G  R + Q+P+SQMN+N++ N
Sbjct: 173 NDPTPV--PNAGVPRVIPQLPASQMNMNMDTN 202


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  109 bits (272), Expect = 5e-22
 Identities = 76/199 (38%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
 Frame = +1

Query: 55  YGGSQKRPYHGGGAISALAEDEMVGEDDEYDDLYNDVNVGEGFLQL---QRPGSSVGVMN 225
           Y   +K  Y G GAI ALAE+EM GEDDEYDDLYNDVNVGE FLQ+   + P     V N
Sbjct: 3   YEEEEKMQYQGSGAIPALAEEEM-GEDDEYDDLYNDVNVGENFLQMHGSEAPAPPATVGN 61

Query: 226 TPFHTQKTTAPKPTTENFVTNEFNIHGVPTDGKFIN--AGFPQAKERLTS----EVGPDS 387
             F T+     +  T           G   +G + N  A FP+ K+   +    +VGP  
Sbjct: 62  GGFQTRNAHESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVEAQDVGPVD 121

Query: 388 GLMNVLGKTSGLNMTHDTQALNSGFRGSASVAQKNGVDSANLSSKVANEFMPLLNPNTGA 567
           G  +V  K   + M+HD Q  N GF+ S  V    GVD +++S K A E  PL    +  
Sbjct: 122 G-SSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAG 180

Query: 568 QRGVSQIPSSQMNVNVNMN 624
            RG  Q+  +QM+++ ++N
Sbjct: 181 PRGAPQMQVNQMHMSADVN 199


>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 573

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 71/199 (35%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
 Frame = +1

Query: 43  QEEVYGGSQKRPYHGGGAISALAEDEMVGEDDEYDDLYNDVNVGEGFLQL----QRPGSS 210
           +E  YGG+QK  + G G I ALA++E++G+DDEYDDLY+DVNVGE F Q     Q P   
Sbjct: 3   EENDYGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPPAQV 62

Query: 211 VGVMNTPFHTQKTTAPKPTTENFVTNEFNIHGVPTDGKFINAGFPQ--AKERLTSEVGPD 384
            G  N     Q +          V+      G   +GK+ N G     +     S+V P 
Sbjct: 63  GGTGNASLQAQTSHVAAEPRMGIVS------GGTVEGKYRNDGGHNGISGPDTRSDVYPQ 116

Query: 385 SGLMNVLGKTSGLNMTHDTQALNSGFRGSASVAQKNGVDSANLSSKVANEFMPLLNPNTG 564
           +          GLN+  D Q+   G +GS SV   N   S N    V    +P+ NP   
Sbjct: 117 ASSFG----AKGLNI--DIQSNKIGQQGSTSVVLNNHGFSGN---AVNVPELPVHNPYGA 167

Query: 565 AQRGVSQIPSSQMNVNVNM 621
             +G  QIP SQM+VN N+
Sbjct: 168 PPQGAQQIPVSQMSVNPNV 186


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