BLASTX nr result

ID: Angelica22_contig00006359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00006359
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510204.1| DNA binding protein, putative [Ricinus commu...    66   1e-12
ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-12
ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-11
ref|XP_003589173.1| Remorin [Medicago truncatula] gi|355478221|g...    55   2e-11
ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...    60   2e-11

>ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis]
           gi|223550905|gb|EEF52391.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 601

 Score = 66.2 bits (160), Expect(2) = 1e-12
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = -2

Query: 186 APEKIPLSSPKERHSFVSSTNSVLPIMEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 10
           +PE    SSP  R SF +ST S+LPI+E Q  H  K QVRDVQVDERVT+++W KK++SR
Sbjct: 412 SPEGSNHSSPSMRTSFSASTPSILPIVEVQSVHTSKSQVRDVQVDERVTVTRWSKKHRSR 471

Query: 9   TTG 1
             G
Sbjct: 472 NQG 474



 Score = 31.6 bits (70), Expect(2) = 1e-12
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -1

Query: 286 TSPPEQDRKPGIIEDEGKNISRDVSRKDMATQMSP 182
           +S   QD K   ++D   ++S  VSR+DMATQMSP
Sbjct: 380 SSSASQDEKLDGVKDAATDLS-SVSRRDMATQMSP 413


>ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|222835259|gb|EEE73694.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 55.5 bits (132), Expect(2) = 5e-12
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 165 SSPKERHSFVSSTNSVLPIMEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSRTTG 1
           SSP  + SF +ST SVLPI+E Q     + + RDVQVDERVT+++W KK+++R  G
Sbjct: 228 SSPTRKPSFSTSTPSVLPIVELQSVPSSRSETRDVQVDERVTVTRWSKKHRARNHG 283



 Score = 40.0 bits (92), Expect(2) = 5e-12
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 286 TSPPEQDRKPGIIEDEGKNISRDVSRKDMATQMSP 182
           +S P QD K   ++D   +ISR VSR+DMATQMSP
Sbjct: 188 SSLPSQDEKLDGVKDAATDISRVVSRRDMATQMSP 222


>ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|222844160|gb|EEE81707.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score = 53.5 bits (127), Expect(2) = 1e-11
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -2

Query: 186 APEKIPLSSPKERHSFVSSTNSVLPIMEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 10
           +PE    SSP  + SF  ST S L I+E Q  +  K +VRDVQVDERVT+++W KK+++R
Sbjct: 396 SPEGSNHSSPTRQPSFSVSTPSSLAIVELQGFNSSKSEVRDVQVDERVTVTRWSKKHRAR 455

Query: 9   TTG 1
             G
Sbjct: 456 NHG 458



 Score = 40.4 bits (93), Expect(2) = 1e-11
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 286 TSPPEQDRKPGIIEDEGKNISRDVSRKDMATQMSP 182
           +S P QD K   ++D   +ISR VSR+DMATQMSP
Sbjct: 363 SSLPSQDEKLDGVKDAATDISRAVSRRDMATQMSP 397


>ref|XP_003589173.1| Remorin [Medicago truncatula] gi|355478221|gb|AES59424.1| Remorin
           [Medicago truncatula]
          Length = 620

 Score = 55.5 bits (132), Expect(2) = 2e-11
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = -2

Query: 186 APEKIPLSSPKERHSFVSSTNSVLPIMEWQDSHFPKQ-VRDVQVDERVTMSQWCKKNKSR 10
           +PE    SSP    SF +S    LP+ + Q   F K  +RDVQVDERVTM++W KK+K+ 
Sbjct: 431 SPEGSSCSSPNMMTSFSASIPPTLPVTDLQSISFSKMDIRDVQVDERVTMTRWSKKHKAL 490

Query: 9   TTG 1
            TG
Sbjct: 491 FTG 493



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = -1

Query: 286 TSPPEQDRKPGIIEDEGKNISRDVSRKDMATQMSP 182
           +S P ++ K    +D G N+S  VSR+DMATQMSP
Sbjct: 398 SSIPSREEKFDAFKDAGTNVSPAVSRRDMATQMSP 432


>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
           gi|302142306|emb|CBI19509.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score = 59.7 bits (143), Expect(2) = 2e-11
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -2

Query: 186 APEKIPLSSPKERHSFVSSTNSVLPIMEWQDSHFPK-QVRDVQVDERVTMSQWCKKNKSR 10
           +PE    SSP+ + SF  S+ +VLPI+E Q  +  K ++RDVQVDERVTM++W KK++ R
Sbjct: 381 SPEGSIFSSPERKPSFSPSSPTVLPIVELQSVNSSKLEIRDVQVDERVTMTRWSKKHRGR 440

Query: 9   TTG 1
             G
Sbjct: 441 IPG 443



 Score = 33.9 bits (76), Expect(2) = 2e-11
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -1

Query: 271 QDRKPGIIEDEGKNISRDVSRKDMATQMSP 182
           +D K   ++D   +ISR VSR+D+ATQMSP
Sbjct: 353 RDEKFDGVKDAATDISRTVSRRDIATQMSP 382


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