BLASTX nr result

ID: Angelica22_contig00005775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00005775
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|2...   192   5e-47
ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arab...   190   2e-46
emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis thal...   187   1e-45
ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana...   187   1e-45
emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thal...   187   1e-45

>ref|XP_002312401.1| predicted protein [Populus trichocarpa] gi|222852221|gb|EEE89768.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  192 bits (487), Expect = 5e-47
 Identities = 104/173 (60%), Positives = 119/173 (68%)
 Frame = +3

Query: 105 GNASNLKASTTQFVSFKLNPTHKNNSSRKPLIVLNQASSLSPITASTSVTSSRLRLDNLG 284
           GN + LK  T  F    L+  +K     +P +V+NQA++ S +T S+    +RLRLDNLG
Sbjct: 19  GNLTRLKPKTCNFTCLTLHSKNK-----RPSVVVNQAAAPSVVTTSSG---ARLRLDNLG 70

Query: 285 PQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVRRGFEGG*MPLYRRLPKLRGI 464
           PQP                        MRGQKSRSGPGVR+GFEGG MPLYRR+PKLRGI
Sbjct: 71  PQPGSRKKGKRKGRGISAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGI 130

Query: 465 AGGMRAGLPKYLPVNLKDIADAGFQEGEEVSLESLKSKGLINPSGRERRLPLK 623
           AGGM AGLPKY+PVNLKDIA AGFQEG EVSLE+LK KGLINPSGRERRLPLK
Sbjct: 131 AGGMHAGLPKYVPVNLKDIASAGFQEGAEVSLETLKEKGLINPSGRERRLPLK 183


>ref|XP_002876939.1| hypothetical protein ARALYDRAFT_484358 [Arabidopsis lyrata subsp.
           lyrata] gi|297322777|gb|EFH53198.1| hypothetical protein
           ARALYDRAFT_484358 [Arabidopsis lyrata subsp. lyrata]
          Length = 275

 Score =  190 bits (482), Expect = 2e-46
 Identities = 104/176 (59%), Positives = 119/176 (67%), Gaps = 3/176 (1%)
 Frame = +3

Query: 105 GNASNLKASTTQFVSFKLNP---THKNNSSRKPLIVLNQASSLSPITASTSVTSSRLRLD 275
           GN S L A+ +Q +S KLN    T K   S +PL+V++QA++ S + A       R RLD
Sbjct: 29  GNVSVLGANPSQILSLKLNQKLKTRKQQQSARPLVVVSQAAATSEVVAP-----ERFRLD 83

Query: 276 NLGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVRRGFEGG*MPLYRRLPKL 455
           NLGPQP                        MRGQKSRSGPG+ RGFEGG   LYRRLPKL
Sbjct: 84  NLGPQPGSRKRQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 143

Query: 456 RGIAGGMRAGLPKYLPVNLKDIADAGFQEGEEVSLESLKSKGLINPSGRERRLPLK 623
           RGIAGGMR+GLPKYLPVNLKDI  AGFQEG+EVSLE+LK KGLINPSGRER+LPLK
Sbjct: 144 RGIAGGMRSGLPKYLPVNLKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLK 199


>emb|CAA77592.1| plastid ribosomal protein CL15 [Arabidopsis thaliana]
          Length = 273

 Score =  187 bits (476), Expect = 1e-45
 Identities = 102/176 (57%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
 Frame = +3

Query: 105 GNASNLKASTTQFVSFKLNPTHKNNSSR---KPLIVLNQASSLSPITASTSVTSSRLRLD 275
           GN S L A+ +Q +S KLN T K  + +   +PL+V++Q ++    T+S  V   R RLD
Sbjct: 25  GNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAA----TSSAVVAPERFRLD 80

Query: 276 NLGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVRRGFEGG*MPLYRRLPKL 455
           NLGPQP                        MRGQKSRSGPG+ RGFEGG   LYRRLPKL
Sbjct: 81  NLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 140

Query: 456 RGIAGGMRAGLPKYLPVNLKDIADAGFQEGEEVSLESLKSKGLINPSGRERRLPLK 623
           RGIAGGMR+GLPKYLPVN+KDI  AGFQEG+EVSLE+LK KGLINPSGRER+LPLK
Sbjct: 141 RGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLK 196


>ref|NP_189221.1| 50S ribosomal protein L15 [Arabidopsis thaliana]
           gi|21431836|sp|P25873.2|RK15_ARATH RecName: Full=50S
           ribosomal protein L15, chloroplastic; AltName:
           Full=CL15; Flags: Precursor
           gi|13877945|gb|AAK44050.1|AF370235_1 putative 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana]
           gi|15983454|gb|AAL11595.1|AF424601_1 AT3g25920/MPE11_7
           [Arabidopsis thaliana] gi|9279597|dbj|BAB01055.1|
           chloroplast 50S ribosomal protein L15 [Arabidopsis
           thaliana] gi|16323474|gb|AAL15231.1| putative 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana] gi|21536722|gb|AAM61054.1| 50S
           ribosomal protein L15, chloroplast precursor
           [Arabidopsis thaliana] gi|332643570|gb|AEE77091.1| 50S
           ribosomal protein L15 [Arabidopsis thaliana]
          Length = 277

 Score =  187 bits (476), Expect = 1e-45
 Identities = 102/176 (57%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
 Frame = +3

Query: 105 GNASNLKASTTQFVSFKLNPTHKNNSSR---KPLIVLNQASSLSPITASTSVTSSRLRLD 275
           GN S L A+ +Q +S KLN T K  + +   +PL+V++Q ++    T+S  V   R RLD
Sbjct: 29  GNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAA----TSSAVVAPERFRLD 84

Query: 276 NLGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVRRGFEGG*MPLYRRLPKL 455
           NLGPQP                        MRGQKSRSGPG+ RGFEGG   LYRRLPKL
Sbjct: 85  NLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 144

Query: 456 RGIAGGMRAGLPKYLPVNLKDIADAGFQEGEEVSLESLKSKGLINPSGRERRLPLK 623
           RGIAGGMR+GLPKYLPVN+KDI  AGFQEG+EVSLE+LK KGLINPSGRER+LPLK
Sbjct: 145 RGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLK 200


>emb|CAA77593.1| Plastid ribosomal protein CL15 [Arabidopsis thaliana]
          Length = 277

 Score =  187 bits (476), Expect = 1e-45
 Identities = 102/176 (57%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
 Frame = +3

Query: 105 GNASNLKASTTQFVSFKLNPTHKNNSSR---KPLIVLNQASSLSPITASTSVTSSRLRLD 275
           GN S L A+ +Q +S KLN T K  + +   +PL+V++Q ++    T+S  V   R RLD
Sbjct: 29  GNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTAA----TSSAVVAPERFRLD 84

Query: 276 NLGPQPXXXXXXXXXXXXXXXXXXXXXXXXMRGQKSRSGPGVRRGFEGG*MPLYRRLPKL 455
           NLGPQP                        MRGQKSRSGPG+ RGFEGG   LYRRLPKL
Sbjct: 85  NLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKL 144

Query: 456 RGIAGGMRAGLPKYLPVNLKDIADAGFQEGEEVSLESLKSKGLINPSGRERRLPLK 623
           RGIAGGMR+GLPKYLPVN+KDI  AGFQEG+EVSLE+LK KGLINPSGRER+LPLK
Sbjct: 145 RGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLK 200


Top