BLASTX nr result

ID: Angelica22_contig00005708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00005708
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   161   1e-51
ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis...   152   1e-48
gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]          155   4e-46
ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-46
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-45

>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  161 bits (407), Expect(2) = 1e-51
 Identities = 77/123 (62%), Positives = 91/123 (73%), Gaps = 2/123 (1%)
 Frame = +1

Query: 262 MGFPVGYTEVFFPKLFIHTLSLLGLIKTFISSLLTHIGLQHYLQPDFSSYTDTPTRPEYP 441
           MGFPVGYTEVF PKLF+HTLS LG I+  I SL   +GL  +L+ D S        PEYP
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSETQAQVPEYP 60

Query: 442 PLSAVLLREFLPVVKFEQVT--DNSPQSCAVCLYELEHGEEIRLLSNCKHIFHRGCLDRW 615
           P+SAVL+RE LPV+KF +     ++P+SCAVCLY+ E GEEIR L+NCKHIFHR CLDRW
Sbjct: 61  PVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRW 120

Query: 616 MDH 624
           MDH
Sbjct: 121 MDH 123



 Score = 69.3 bits (168), Expect(2) = 1e-51
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +3

Query: 702 WMDHDQKTCPLCRTPFVPRGLQDEFDQRLWAA 797
           WMDHDQKTCPLCRTPFVP  +QDEF+QRLWAA
Sbjct: 120 WMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAA 151


>ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis thaliana]
           gi|297820998|ref|XP_002878382.1|
           brassinosteroid-responsive ring-H2 [Arabidopsis lyrata
           subsp. lyrata] gi|4689366|gb|AAD27870.1|AF134155_1 BRH1
           RING finger protein [Arabidopsis thaliana]
           gi|6850837|emb|CAB71076.1| RING finger protein
           [Arabidopsis thaliana] gi|17644157|gb|AAL38776.1|
           putative RING finger protein [Arabidopsis thaliana]
           gi|21436189|gb|AAM51382.1| putative RING finger protein
           [Arabidopsis thaliana] gi|21554590|gb|AAM63625.1| RING
           finger protein [Arabidopsis thaliana]
           gi|297324220|gb|EFH54641.1| brassinosteroid-responsive
           ring-H2 [Arabidopsis lyrata subsp. lyrata]
           gi|332646687|gb|AEE80208.1| brassinosteroid-responsive
           RING-H2 [Arabidopsis thaliana]
          Length = 170

 Score =  152 bits (384), Expect(2) = 1e-48
 Identities = 75/128 (58%), Positives = 95/128 (74%), Gaps = 7/128 (5%)
 Frame = +1

Query: 262 MGFPVGYTEVFFPKLFIHTLSLLGLIKTFISSLLTHIGLQHYLQPD--FSSYTDTPTR-P 432
           MGFPVGYTEVF PKLF+ TLS+LG I+T + S+   +GL  +L+ D  +  YT  PTR P
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIP 60

Query: 433 EY-PPLSAVLLREFLPVVKFEQVTDNS---PQSCAVCLYELEHGEEIRLLSNCKHIFHRG 600
           E   P SA+L+RE LPV+KFE++T++    P++CAVCLYE E  +EIR L NC+HIFHR 
Sbjct: 61  ETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRS 120

Query: 601 CLDRWMDH 624
           CLDRWMDH
Sbjct: 121 CLDRWMDH 128



 Score = 67.8 bits (164), Expect(2) = 1e-48
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 702 WMDHDQKTCPLCRTPFVPRGLQDEFDQRLWAA 797
           WMDHDQKTCPLCRTPFVP  +Q+EF+QRLWAA
Sbjct: 125 WMDHDQKTCPLCRTPFVPDEMQEEFNQRLWAA 156


>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score =  155 bits (393), Expect(2) = 4e-46
 Identities = 75/127 (59%), Positives = 93/127 (73%), Gaps = 6/127 (4%)
 Frame = +1

Query: 262 MGFPVGYTEVFFPKLFIHTLSLLGLIKTFISSLLTHIGLQHYLQPDFSSYTDTPTR-PEY 438
           MGFPVGYTEVF PKLF+HTLSLLG I++ I  L  ++GL  +L+ D + + D PTR   +
Sbjct: 1   MGFPVGYTEVFLPKLFVHTLSLLGFIRSLILCLFNYLGLSDFLETD-NIWPDNPTRIHSH 59

Query: 439 PPLSAVLLREFLPVVKFEQVTDNS-----PQSCAVCLYELEHGEEIRLLSNCKHIFHRGC 603
           PP+SA L+RE LPV+KFE +   +     P+SCAVCLYE +  +EIR L NCKHIFHR C
Sbjct: 60  PPVSATLIREILPVIKFEDLVPGAGEGDLPESCAVCLYEFDGEDEIRWLKNCKHIFHRAC 119

Query: 604 LDRWMDH 624
           LDRWMDH
Sbjct: 120 LDRWMDH 126



 Score = 56.2 bits (134), Expect(2) = 4e-46
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +3

Query: 702 WMDHDQKTCPLCRTPFVPRGLQDEFDQRLWAA 797
           WMDHD+ TCPLCRT FVP  +Q+EF+QRL AA
Sbjct: 123 WMDHDRNTCPLCRTSFVPDEMQEEFNQRLLAA 154


>ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|222844323|gb|EEE81870.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  150 bits (380), Expect(2) = 4e-46
 Identities = 75/128 (58%), Positives = 88/128 (68%), Gaps = 7/128 (5%)
 Frame = +1

Query: 262 MGFPVGYTEVFFPKLFIHTLSLLGLIKTFISSLLTHIGLQHYLQPDFSSYTDTPTRPE-Y 438
           MGFPVGY+EVF PKLF+H LS LG I+  I  L  ++GL  +L+ D + + D P R   Y
Sbjct: 1   MGFPVGYSEVFLPKLFVHILSFLGFIRNLILCLFNYLGLSGFLETD-NIWPDNPIRMSCY 59

Query: 439 PPLSAVLLREFLPVVKFEQVTDNS------PQSCAVCLYELEHGEEIRLLSNCKHIFHRG 600
           PPLSA LLRE LPV+KFE +          P+SCAVCLYE E  +EIR L NCKHIFHR 
Sbjct: 60  PPLSAALLREILPVIKFEDLVTGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRT 119

Query: 601 CLDRWMDH 624
           CLDRWMDH
Sbjct: 120 CLDRWMDH 127



 Score = 61.2 bits (147), Expect(2) = 4e-46
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +3

Query: 702 WMDHDQKTCPLCRTPFVPRGLQDEFDQRLWAA 797
           WMDHD+KTCPLCR  FVP  +Q+EF+QRLWAA
Sbjct: 124 WMDHDRKTCPLCRNSFVPDEMQEEFNQRLWAA 155


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  150 bits (379), Expect(2) = 1e-45
 Identities = 74/128 (57%), Positives = 89/128 (69%), Gaps = 7/128 (5%)
 Frame = +1

Query: 262 MGFPVGYTEVFFPKLFIHTLSLLGLIKTFISSLLTHIGLQHYLQPDFSSYTDTPTRPE-Y 438
           MGFPVGY+EV  PKLF+H LSLLG I+  +  L T++GL  +L+ D + + D PTR   Y
Sbjct: 1   MGFPVGYSEVLLPKLFVHALSLLGFIRGLVLCLFTYVGLSDFLETD-NIWPDYPTRTSFY 59

Query: 439 PPLSAVLLREFLPVVKFEQVTDNS------PQSCAVCLYELEHGEEIRLLSNCKHIFHRG 600
           P LSA L+RE LPV+KFE +          P+SCAVCLYE E  +EIR L NCKHIFHR 
Sbjct: 60  PSLSAALIREILPVIKFEDLLGGDGGCCDLPESCAVCLYEFEGEDEIRWLKNCKHIFHRA 119

Query: 601 CLDRWMDH 624
           CLDRWMDH
Sbjct: 120 CLDRWMDH 127



 Score = 60.1 bits (144), Expect(2) = 1e-45
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +3

Query: 702 WMDHDQKTCPLCRTPFVPRGLQDEFDQRLWAA 797
           WMDHD+ TCPLCRT FVP  +Q EF+QRLWAA
Sbjct: 124 WMDHDRNTCPLCRTSFVPDEMQGEFNQRLWAA 155


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