BLASTX nr result
ID: Angelica22_contig00005053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00005053
(1959 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 915 0.0
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub... 912 0.0
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode... 910 0.0
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2... 907 0.0
emb|CBI21137.3| unnamed protein product [Vitis vinifera] 901 0.0
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 915 bits (2365), Expect = 0.0
Identities = 447/558 (80%), Positives = 493/558 (88%), Gaps = 4/558 (0%)
Frame = -3
Query: 1954 DAGRILRPLLVVHNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGIKYLMMQ 1775
DAGRILRPLLVV NL KI++ KGG+ +FQSLLD G+IE +GTEEEEDC TAWGIK+L+
Sbjct: 646 DAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSG 705
Query: 1774 TSGDAPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFSGTNPSIR 1595
G KYTHCELDMSFLLGLS G+ PF NHDHARR LYQ+QKHS QAIGF TNP+IR
Sbjct: 706 VDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIR 765
Query: 1594 VDTNTNQLYYPQRPLFRTMLSECLGKAENSR----MLPKPEFYNGQCAIVAVNVHLGYNQ 1427
VDT ++QLYYPQRPLFRT+ S+CLGK ++R ++PKPE YNGQ AIVAVNVHLGYNQ
Sbjct: 766 VDTLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQ 825
Query: 1426 EDSLVMNRSSLERGMFRSEHVRSYKAEVNNTEATLKKQKIEDAINFGKIPSKIGRVDSLD 1247
EDSLVMNR+SLERGMFRSEH+RSYKA+V+N E K++K +D +NFGKIPSKIGRVDSLD
Sbjct: 826 EDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLD 885
Query: 1246 EDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVSLR 1067
+DGFPFIGANLQ+GDIVIG+ AESG D S+KLKHTE+GMVQKV+LSSNDEGKNFAVVSLR
Sbjct: 886 DDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 945
Query: 1066 QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXX 887
QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPH+FPSRQTPGQ
Sbjct: 946 QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEA 1005
Query: 886 XXXXXXXXXXXERYATPFSTVSVDAITNQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGP 707
+YATPFST+SV+AITNQLHRAGFSRWGNERVYNGRTGEM+RSL+FMGP
Sbjct: 1006 ALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGP 1065
Query: 706 TCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 527
T YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE
Sbjct: 1066 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 1125
Query: 526 RLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVKVSVPYGAKLL 347
RLFTLSD SQMHIC+KCK+ ANVIQR V GGRKIRGPYCR C+S ++IVKV+VPYGAKLL
Sbjct: 1126 RLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYGAKLL 1185
Query: 346 CQELFSMGISLKFETQLC 293
CQELFSMGISLKFET+LC
Sbjct: 1186 CQELFSMGISLKFETRLC 1203
>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
vinifera]
Length = 1198
Score = 912 bits (2356), Expect = 0.0
Identities = 441/558 (79%), Positives = 499/558 (89%), Gaps = 4/558 (0%)
Frame = -3
Query: 1954 DAGRILRPLLVVHNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGIKYLMMQ 1775
DAGRILRPLLVV NL+K+K+ KG D++FQSLLD G++ELIG EEEEDC TAWGIKYL+ +
Sbjct: 642 DAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL-K 700
Query: 1774 TSGDAPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFSGTNPSIR 1595
D P KYTHCELDMSFLLGLS G+ P+ NHDHARR LYQS+KHS QAIGFS TNP+IR
Sbjct: 701 GHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 760
Query: 1594 VDTNTNQLYYPQRPLFRTMLSECLGKAENSR----MLPKPEFYNGQCAIVAVNVHLGYNQ 1427
VDT ++QLYYPQRPLFRTM+S+CLGK S ++P+PE++NGQ AIVAVNVHLGYNQ
Sbjct: 761 VDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQ 820
Query: 1426 EDSLVMNRSSLERGMFRSEHVRSYKAEVNNTEATLKKQKIEDAINFGKIPSKIGRVDSLD 1247
EDSLVMNR+SLERGMFRSEH+RSYK+EV+N E+ KK+K ED+++FGK+ SKIGRVDSLD
Sbjct: 821 EDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLD 880
Query: 1246 EDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVSLR 1067
+DGFPFIGANLQ GDIVIG+ AESGVD S+KLKHTE+GMVQKV++S+ND+GKNFAVVSLR
Sbjct: 881 DDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLR 940
Query: 1066 QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXX 887
QVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ
Sbjct: 941 QVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1000
Query: 886 XXXXXXXXXXXERYATPFSTVSVDAITNQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGP 707
R+ATPFST+SVDAI +QLHRAGFSRWG+ERVYNGRTGEM+RSL+FMGP
Sbjct: 1001 ALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGP 1060
Query: 706 TCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 527
T YQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHE
Sbjct: 1061 TFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHE 1120
Query: 526 RLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVKVSVPYGAKLL 347
RLFTLSD + MHICR+CK+ +NVIQR+V GGRK+RGPYCRYC+SSE+IVKV+VPYGAKLL
Sbjct: 1121 RLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLL 1180
Query: 346 CQELFSMGISLKFETQLC 293
CQELFSMGISLKFETQLC
Sbjct: 1181 CQELFSMGISLKFETQLC 1198
>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
Length = 1019
Score = 910 bits (2351), Expect = 0.0
Identities = 441/557 (79%), Positives = 493/557 (88%), Gaps = 4/557 (0%)
Frame = -3
Query: 1954 DAGRILRPLLVVHNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGIKYLMMQ 1775
DAGRILRPLLVV NL KIK+ KGGDYSFQSLLD GVIE IGTEEEEDC TAWGI YL M+
Sbjct: 462 DAGRILRPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGINYLFME 521
Query: 1774 TSGDAPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFSGTNPSIR 1595
A KYTHCELDMSFLLGLSA + PF NHDHARR LYQS+KHS QA+GF+ TNP+IR
Sbjct: 522 NEAKATVKYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNTTNPNIR 581
Query: 1594 VDTNTNQLYYPQRPLFRTMLSECLGKAE----NSRMLPKPEFYNGQCAIVAVNVHLGYNQ 1427
VDTNT+QLYYPQRPLFRTM+S+CLGK ++ ++P+ E++NGQCAIVAVNVHLGYNQ
Sbjct: 582 VDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVPRAEYFNGQCAIVAVNVHLGYNQ 641
Query: 1426 EDSLVMNRSSLERGMFRSEHVRSYKAEVNNTEATLKKQKIEDAINFGKIPSKIGRVDSLD 1247
EDSLVMNR+SLERGMFRSEH+RSYKA+V+N E+ KK K ED++NFGK+ SKIGRVDSLD
Sbjct: 642 EDSLVMNRASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKIGRVDSLD 701
Query: 1246 EDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVSLR 1067
+DGFPFIGANLQ GDIV+G+ AESG D S+KLKHTE+GMVQKV+LS+NDEGKNFAVVSLR
Sbjct: 702 DDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLR 761
Query: 1066 QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXX 887
QVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIV+NPHAFPSRQTPGQ
Sbjct: 762 QVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQTPGQLLEA 821
Query: 886 XXXXXXXXXXXERYATPFSTVSVDAITNQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGP 707
++YATPFST+SVDA+T+QLHRAGFSRWG+ERVYNGRTGEMI SLVFMGP
Sbjct: 822 ALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIHSLVFMGP 881
Query: 706 TCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 527
T YQRL HM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA+ANLHE
Sbjct: 882 TFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHE 941
Query: 526 RLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVKVSVPYGAKLL 347
RLFTLSD SQMHICRKC + ANVIQR V GGRKIRGPYCR+C+S E+IV+V+VPYGAKLL
Sbjct: 942 RLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNVPYGAKLL 1001
Query: 346 CQELFSMGISLKFETQL 296
QELFSMGI++KF+T+L
Sbjct: 1002 AQELFSMGITMKFDTEL 1018
>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
predicted protein [Populus trichocarpa]
Length = 1160
Score = 907 bits (2345), Expect = 0.0
Identities = 445/553 (80%), Positives = 488/553 (88%)
Frame = -3
Query: 1954 DAGRILRPLLVVHNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGIKYLMMQ 1775
DAGRILRPLLVV NL KIK+ KGG+Y F SLLD G+IE IGTEEEEDCCTAWGIK+L+
Sbjct: 614 DAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLAD 673
Query: 1774 TSGDAPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFSGTNPSIR 1595
G P KY+HCELDMSFLLGLS G+ PF NHDHARR LYQ+QKHS QAIGFS TNP+IR
Sbjct: 674 IEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIR 733
Query: 1594 VDTNTNQLYYPQRPLFRTMLSECLGKAENSRMLPKPEFYNGQCAIVAVNVHLGYNQEDSL 1415
VDT ++QL+YPQRPLFRTM+S+CL +LPKPE +NGQ AIVAVNVHLGYNQEDSL
Sbjct: 734 VDTLSHQLHYPQRPLFRTMISDCL-------VLPKPELFNGQNAIVAVNVHLGYNQEDSL 786
Query: 1414 VMNRSSLERGMFRSEHVRSYKAEVNNTEATLKKQKIEDAINFGKIPSKIGRVDSLDEDGF 1235
VMNR+SLERGMFRSEH+RSYKAEV+N E T K++K ED+I FGKI SKIGRVDSLD+DGF
Sbjct: 787 VMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLDDDGF 846
Query: 1234 PFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRS 1055
PFIGAN+Q+GDIVIGK AESG D SVKLKHTE+GMVQKV+LSSNDEGKNFAVVSLRQVRS
Sbjct: 847 PFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRS 906
Query: 1054 PCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXX 875
PCLGDKFSSMHGQKGVLGFLESQENFPFT QG+VPDIVINPHAFPSRQTPGQ
Sbjct: 907 PCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEAALGK 966
Query: 874 XXXXXXXERYATPFSTVSVDAITNQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQ 695
+RYATPFST+SVD I +QLHRA FSRWGNERVYNGRTGEM+RSL+FMGPT YQ
Sbjct: 967 GIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGPTFYQ 1026
Query: 694 RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT 515
RL+HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT
Sbjct: 1027 RLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT 1086
Query: 514 LSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVKVSVPYGAKLLCQEL 335
LSD S+MHIC+KCK+ ANVIQR V GGRKIRGPYCR C+S +D+VKVSVPYGAKLLCQEL
Sbjct: 1087 LSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLLCQEL 1146
Query: 334 FSMGISLKFETQL 296
FSMGISLKF+T++
Sbjct: 1147 FSMGISLKFDTRV 1159
>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
Length = 1220
Score = 901 bits (2329), Expect = 0.0
Identities = 437/554 (78%), Positives = 493/554 (88%)
Frame = -3
Query: 1954 DAGRILRPLLVVHNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGIKYLMMQ 1775
DAGRILRPLLVV NL+K+K+ KG D++FQSLLD G++ELIG EEEEDC TAWGIKYL+ +
Sbjct: 678 DAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLL-K 736
Query: 1774 TSGDAPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFSGTNPSIR 1595
D P KYTHCELDMSFLLGLS G+ P+ NHDHARR LYQS+KHS QAIGFS TNP+IR
Sbjct: 737 GHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 796
Query: 1594 VDTNTNQLYYPQRPLFRTMLSECLGKAENSRMLPKPEFYNGQCAIVAVNVHLGYNQEDSL 1415
VDT ++QLYYPQRPLFRTM+S+ LP+PE++NGQ AIVAVNVHLGYNQEDSL
Sbjct: 797 VDTLSHQLYYPQRPLFRTMISD----------LPRPEYFNGQIAIVAVNVHLGYNQEDSL 846
Query: 1414 VMNRSSLERGMFRSEHVRSYKAEVNNTEATLKKQKIEDAINFGKIPSKIGRVDSLDEDGF 1235
VMNR+SLERGMFRSEH+RSYK+EV+N E+ KK+K ED+++FGK+ SKIGRVDSLD+DGF
Sbjct: 847 VMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSLDDDGF 906
Query: 1234 PFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVSLRQVRS 1055
PFIGANLQ GDIVIG+ AESGVD S+KLKHTE+GMVQKV++S+ND+GKNFAVVSLRQVR+
Sbjct: 907 PFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRT 966
Query: 1054 PCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXXXXXX 875
PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPGQ
Sbjct: 967 PCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGK 1026
Query: 874 XXXXXXXERYATPFSTVSVDAITNQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGPTCYQ 695
R+ATPFST+SVDAI +QLHRAGFSRWG+ERVYNGRTGEM+RSL+FMGPT YQ
Sbjct: 1027 GIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQ 1086
Query: 694 RLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFT 515
RLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLHERLFT
Sbjct: 1087 RLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFT 1146
Query: 514 LSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVKVSVPYGAKLLCQEL 335
LSD + MHICR+CK+ +NVIQR+V GGRK+RGPYCRYC+SSE+IVKV+VPYGAKLLCQEL
Sbjct: 1147 LSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKLLCQEL 1206
Query: 334 FSMGISLKFETQLC 293
FSMGISLKFETQLC
Sbjct: 1207 FSMGISLKFETQLC 1220