BLASTX nr result

ID: Angelica22_contig00004978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00004978
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   342   7e-92
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   342   9e-92
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   340   3e-91
ref|NP_173289.1| 60S ribosomal protein L6-1 [Arabidopsis thalian...   340   4e-91
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   337   2e-90

>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  342 bits (878), Expect = 7e-92
 Identities = 174/231 (75%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
 Frame = +3

Query: 129 MAAKTKR-SRNPELIRGVGKYSRSEMYHRRGLWAIKAKNGGVFPRHDAQPKSEAPLEKPP 305
           MA KT R SRNPELIRGVGKYSRS+MYH+RGLWAIKAKNGGVFPRHDA+PK+++P EKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 306 KFYPADDVKKPCFNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTG 485
           KFYPADDVKKP  NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 486 PFKINGVPLRRVNQAYVIGTSTKVNIDGVNVEKFDDKYFXXXXXXXXXXXXXXXXXXXXX 665
           PFK+NGVPLRRVNQ+YVI TSTKV+I GVNVEKF DKYF                     
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 666 XXXTLPQGKKEDQQAVDAVLLKSIECVPDLKTYLSSRFSLMSGMKPHELVF 818
               LPQ KK+DQ+AVD+ LLKSIE V DLKTYL++RFSL +GMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  342 bits (877), Expect = 9e-92
 Identities = 174/231 (75%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
 Frame = +3

Query: 129 MAAKTKR-SRNPELIRGVGKYSRSEMYHRRGLWAIKAKNGGVFPRHDAQPKSEAPLEKPP 305
           MA KT R SRNP+LIRGVGKYSRS+MYH+RGLWAIKAKNGGVFPRHDA+PK+EAP EKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 306 KFYPADDVKKPCFNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTG 485
           KFYPADDVKKP  NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 486 PFKINGVPLRRVNQAYVIGTSTKVNIDGVNVEKFDDKYFXXXXXXXXXXXXXXXXXXXXX 665
           PFK+NGVPLRRVNQ+YVI TSTKV+I GV+VEKFDDKYF                     
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 666 XXXTLPQGKKEDQQAVDAVLLKSIECVPDLKTYLSSRFSLMSGMKPHELVF 818
               LPQ KK+DQ+AVD+ LLKSIE V DLKTYL++RFSL +GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  340 bits (872), Expect = 3e-91
 Identities = 173/231 (74%), Positives = 189/231 (81%), Gaps = 1/231 (0%)
 Frame = +3

Query: 129 MAAKTKR-SRNPELIRGVGKYSRSEMYHRRGLWAIKAKNGGVFPRHDAQPKSEAPLEKPP 305
           MA KT R SRNPELIRGVGKYSRS+MYH+RGLWAIKAKNGGVFPRHDA+PK+++P EKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 306 KFYPADDVKKPCFNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTG 485
           KFYPADDVKKP  NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL  GLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPFGLLLVTG 120

Query: 486 PFKINGVPLRRVNQAYVIGTSTKVNIDGVNVEKFDDKYFXXXXXXXXXXXXXXXXXXXXX 665
           PFK+NGVPLRRVNQ+YVI TSTKV+I GVNVEKF DKYF                     
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 666 XXXTLPQGKKEDQQAVDAVLLKSIECVPDLKTYLSSRFSLMSGMKPHELVF 818
               LPQ KK+DQ+AVD+ LLKSIE V DLKTYL++RFSL +GMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|NP_173289.1| 60S ribosomal protein L6-1 [Arabidopsis thaliana]
           gi|75173375|sp|Q9FZ76.1|RL61_ARATH RecName: Full=60S
           ribosomal protein L6-1
           gi|9795602|gb|AAF98420.1|AC026238_12 Putative 60S
           ribosomal protein L6 [Arabidopsis thaliana]
           gi|15451190|gb|AAK96866.1| Putative 60S ribosomal
           protein L6 [Arabidopsis thaliana]
           gi|18377490|gb|AAL66911.1| putative 60S ribosomal
           protein L6 [Arabidopsis thaliana]
           gi|332191606|gb|AEE29727.1| 60S ribosomal protein L6-1
           [Arabidopsis thaliana]
          Length = 233

 Score =  340 bits (871), Expect = 4e-91
 Identities = 171/233 (73%), Positives = 189/233 (81%), Gaps = 1/233 (0%)
 Frame = +3

Query: 123 MKMAAKT-KRSRNPELIRGVGKYSRSEMYHRRGLWAIKAKNGGVFPRHDAQPKSEAPLEK 299
           M  A +T K +RNP+LIRGVGKYSRS+MYH+RGLWAIKAKNGGVFPRHDAQPK +AP+EK
Sbjct: 1   MPAAKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEK 60

Query: 300 PPKFYPADDVKKPCFNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLV 479
           P KFYPA+DVKKP  N+RKPKPTKL+ASITPGTVLIILAGRFKGKRVVFLKQL+SGLLLV
Sbjct: 61  PAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLV 120

Query: 480 TGPFKINGVPLRRVNQAYVIGTSTKVNIDGVNVEKFDDKYFXXXXXXXXXXXXXXXXXXX 659
           TGPFKINGVPLRRVNQAYVIGTSTK++I GVN EKFDDKYF                   
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAE 180

Query: 660 XXXXXTLPQGKKEDQQAVDAVLLKSIECVPDLKTYLSSRFSLMSGMKPHELVF 818
                 +PQ KKEDQ+ VDA L+KSIE VP+LK YL +RFSL  GMKPHELVF
Sbjct: 181 KEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  337 bits (865), Expect = 2e-90
 Identities = 168/233 (72%), Positives = 189/233 (81%), Gaps = 3/233 (1%)
 Frame = +3

Query: 129 MAAKT---KRSRNPELIRGVGKYSRSEMYHRRGLWAIKAKNGGVFPRHDAQPKSEAPLEK 299
           MA KT   K +RNP+L+RG+GKYSRS+MYH+RGLWAIKAKNGGVFP+HD +PK  AP EK
Sbjct: 1   MAPKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEK 60

Query: 300 PPKFYPADDVKKPCFNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLV 479
           PPKFYPADDVKKP  NKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQL+SGLLL+
Sbjct: 61  PPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLI 120

Query: 480 TGPFKINGVPLRRVNQAYVIGTSTKVNIDGVNVEKFDDKYFXXXXXXXXXXXXXXXXXXX 659
           TGPFKINGVPLRRVNQ+YVI TSTKV+I GVNV+KFDDK+F                   
Sbjct: 121 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAE 180

Query: 660 XXXXXTLPQGKKEDQQAVDAVLLKSIECVPDLKTYLSSRFSLMSGMKPHELVF 818
                 LPQ KK+DQ+ VDA L+KSIE VP+LK YL++RFSL +GMKPHELVF
Sbjct: 181 KDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


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