BLASTX nr result
ID: Angelica22_contig00004927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00004927
(1591 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arab... 532 e-148
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large... 532 e-148
gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190... 531 e-148
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 531 e-148
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops... 531 e-148
>ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata] gi|297333961|gb|EFH64379.1| hypothetical protein
ARALYDRAFT_475241 [Arabidopsis lyrata subsp. lyrata]
Length = 589
Score = 532 bits (1370), Expect = e-148
Identities = 271/412 (65%), Positives = 310/412 (75%), Gaps = 5/412 (1%)
Frame = +1
Query: 115 SGFDMAPT--VPTTMPGAPGQQPEVPQA--MPGMFQNMFPFGTAQ-MGAVPMMPAQAMTQ 279
SGFDMAP + T A GQ P VP +PGMF NMFP Q +GA+P++P QAMTQ
Sbjct: 189 SGFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLPVQAMTQ 248
Query: 280 QATRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 459
QATRHARRVYVGGLPP ANEQ++ATFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFVE
Sbjct: 249 QATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVE 308
Query: 460 MRTVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPNPHXXXXXXXXXXXXX 639
MR+VEEASNAMALDGI+ EGV V+VRRPTDYNPSLAA LGPSQPNP+
Sbjct: 309 MRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSSGST 368
Query: 640 XXXXXPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGA 819
PDRIFVGGLPYYFTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 820 TDVACAALNGLKMGDKTLTVRRATVSNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLP 999
TD+ACAALNG+KMGDKTLTVRRA Q K EQE ++ LQ GG
Sbjct: 429 TDIACAALNGIKMGDKTLTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGG---- 484
Query: 1000 GVGTDEATATPTKILCLTEVITADELMDDGEYEEILEDMKDEGGKFGDLISVVIPRPSPS 1179
TPTKI+CLT+V+TAD+L DD EY +I+EDM+ EGGKFG+L++VVIPRP+P
Sbjct: 485 ---------TPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNPD 535
Query: 1180 GEQIEGLGKVFLEYADTTGCSNARESLSGRKFGGNSVIAVYYPEDKFYDGDY 1335
+ G+GKVFLEYAD G S AR ++GRKFGGN V+AVYYPEDK+ GDY
Sbjct: 536 HDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDY 587
>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 573
Score = 532 bits (1370), Expect = e-148
Identities = 269/410 (65%), Positives = 307/410 (74%), Gaps = 3/410 (0%)
Frame = +1
Query: 115 SGFDMAPTVPTTMPG---APGQQPEVPQAMPGMFQNMFPFGTAQMGAVPMMPAQAMTQQA 285
SGFDMAP +PG A GQ P +PGMF NMFP + Q GA+P+MP QAMTQQA
Sbjct: 175 SGFDMAPPTSAMLPGITAAAGQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQA 234
Query: 286 TRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 465
TRHARRVYVGGLP ANEQ++ATFFSH+M+AIGGN+AGPGDAVVNVYIN+EKKFAFVEMR
Sbjct: 235 TRHARRVYVGGLPAHANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMR 294
Query: 466 TVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPNPHXXXXXXXXXXXXXXX 645
+VEEASNAMALDGI+FEG +VRRP+DYNPSLAA LGPSQPNP+
Sbjct: 295 SVEEASNAMALDGIIFEGAPCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGG 354
Query: 646 XXXPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATD 825
PDRIFVGGLPYYFTE QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVY+D TD
Sbjct: 355 LEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 414
Query: 826 VACAALNGLKMGDKTLTVRRATVSNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGV 1005
+ACAALNG+KMGDKTLTVRRA Q K EQES ++ LQ
Sbjct: 415 IACAALNGIKMGDKTLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQ--------- 465
Query: 1006 GTDEATATPTKILCLTEVITADELMDDGEYEEILEDMKDEGGKFGDLISVVIPRPSPSGE 1185
TK+L LTEVI+ADEL DD +Y++ILEDM+ E GKFG L++VVIPRPSP+GE
Sbjct: 466 ----PATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGE 521
Query: 1186 QIEGLGKVFLEYADTTGCSNARESLSGRKFGGNSVIAVYYPEDKFYDGDY 1335
G+GKVFLEYAD S AR+SL+GRKFGGN V+AV+YPE+KFY+GDY
Sbjct: 522 PTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDY 571
>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 531 bits (1368), Expect = e-148
Identities = 270/413 (65%), Positives = 309/413 (74%), Gaps = 6/413 (1%)
Frame = +1
Query: 115 SGFDMAPT---VPTTMPGAPGQQPEVPQA--MPGMFQNMFPFGTAQ-MGAVPMMPAQAMT 276
SGFDMAP T + A GQ P VP +PGMF NMFP Q +GA+P++P QAMT
Sbjct: 167 SGFDMAPPDMLAATAVAAAAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMT 226
Query: 277 QQATRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFV 456
QQATRHARRVYVGGLPP ANEQ+++TFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFV
Sbjct: 227 QQATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFV 286
Query: 457 EMRTVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPNPHXXXXXXXXXXXX 636
EMR+VEEASNAMALDGI+ EGV V+VRRPTDYNPSLAA LGPSQPNP+
Sbjct: 287 EMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGS 346
Query: 637 XXXXXXPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQG 816
PDRIFVGGLPYYFTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D
Sbjct: 347 TGGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPS 406
Query: 817 ATDVACAALNGLKMGDKTLTVRRATVSNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNL 996
TD+ACAALNG+KMGDKTLTVRRA Q K EQE ++ Q GG
Sbjct: 407 VTDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGG--- 463
Query: 997 PGVGTDEATATPTKILCLTEVITADELMDDGEYEEILEDMKDEGGKFGDLISVVIPRPSP 1176
TPTKI+CLT+V+TAD+L DD EY EI+EDM+ EGGKFG+L++VVIPRP+P
Sbjct: 464 ----------TPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNP 513
Query: 1177 SGEQIEGLGKVFLEYADTTGCSNARESLSGRKFGGNSVIAVYYPEDKFYDGDY 1335
+ G+GKVFLEYAD G S AR ++GRKFGGN V+AVYYPEDK+ GDY
Sbjct: 514 DHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 566
>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 555
Score = 531 bits (1368), Expect = e-148
Identities = 269/412 (65%), Positives = 307/412 (74%), Gaps = 3/412 (0%)
Frame = +1
Query: 115 SGFDMAPTVPTTMPGAP---GQQPEVPQAMPGMFQNMFPFGTAQMGAVPMMPAQAMTQQA 285
SGFDMAP +PGA GQ P A+PG+F NMFP ++Q GA+PMMP QAMTQQA
Sbjct: 157 SGFDMAPPTTALLPGATDAAGQVPGTNPAIPGLFSNMFPLASSQFGALPMMPVQAMTQQA 216
Query: 286 TRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMR 465
TRHARRVYVGGLPP ANEQ++ATFFSH+M AIGGN+AGPGDAVVNVYINHEKKFAFVEMR
Sbjct: 217 TRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMR 276
Query: 466 TVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPNPHXXXXXXXXXXXXXXX 645
+VEEASNAMALDG++FEG V+VRRP+DYNPSLAA LGPSQP+P+
Sbjct: 277 SVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGG 336
Query: 646 XXXPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATD 825
PDRIFVGGLPYYFTE QIRELLESFG LRGFDLVKDR+TGNSKGY FCVY+D TD
Sbjct: 337 LEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 396
Query: 826 VACAALNGLKMGDKTLTVRRATVSNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGV 1005
+ACAALNG+KMGDKTLTVRRA Q EQES + LQ G
Sbjct: 397 IACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPG------- 449
Query: 1006 GTDEATATPTKILCLTEVITADELMDDGEYEEILEDMKDEGGKFGDLISVVIPRPSPSGE 1185
A TK+LCLTEV+T DEL DD +Y++ILEDM+ E KFG L++VVIPRP+P+G
Sbjct: 450 ------ALATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGV 503
Query: 1186 QIEGLGKVFLEYADTTGCSNARESLSGRKFGGNSVIAVYYPEDKFYDGDYGA 1341
GLGKVFLEYAD G S AR+ L+GRKFGGN V+AV+YPE+KF +GDY A
Sbjct: 504 PTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYEA 555
>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B gi|332195625|gb|AEE33746.1| Splicing factor
U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 531 bits (1367), Expect = e-148
Identities = 270/412 (65%), Positives = 309/412 (75%), Gaps = 5/412 (1%)
Frame = +1
Query: 115 SGFDMAPT--VPTTMPGAPGQQPEVPQA--MPGMFQNMFPFGTAQ-MGAVPMMPAQAMTQ 279
SGFDMAP + T A GQ P VP +PGMF NMFP Q +GA+P++P QAMTQ
Sbjct: 189 SGFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQ 248
Query: 280 QATRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVE 459
QATRHARRVYVGGLPP ANEQ+++TFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFVE
Sbjct: 249 QATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVE 308
Query: 460 MRTVEEASNAMALDGIMFEGVSVRVRRPTDYNPSLAAALGPSQPNPHXXXXXXXXXXXXX 639
MR+VEEASNAMALDGI+ EGV V+VRRPTDYNPSLAA LGPSQPNP+
Sbjct: 309 MRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGST 368
Query: 640 XXXXXPDRIFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGA 819
PDRIFVGGLPYYFTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 820 TDVACAALNGLKMGDKTLTVRRATVSNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLP 999
TD+ACAALNG+KMGDKTLTVRRA Q K EQE ++ Q GG
Sbjct: 429 TDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGG---- 484
Query: 1000 GVGTDEATATPTKILCLTEVITADELMDDGEYEEILEDMKDEGGKFGDLISVVIPRPSPS 1179
TPTKI+CLT+V+TAD+L DD EY EI+EDM+ EGGKFG+L++VVIPRP+P
Sbjct: 485 ---------TPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPD 535
Query: 1180 GEQIEGLGKVFLEYADTTGCSNARESLSGRKFGGNSVIAVYYPEDKFYDGDY 1335
+ G+GKVFLEYAD G S AR ++GRKFGGN V+AVYYPEDK+ GDY
Sbjct: 536 HDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587