BLASTX nr result

ID: Angelica22_contig00004563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00004563
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-49
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   197   7e-48
gb|AAM65773.1| putative RING zinc finger protein [Arabidopsis th...   194   6e-47
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...   193   7e-47

>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  205 bits (521), Expect = 2e-50
 Identities = 126/276 (45%), Positives = 162/276 (58%), Gaps = 19/276 (6%)
 Frame = -3

Query: 1196 YALSGKIMLSAIVVLFVVVALMICLHMXXXXXXXXXXXXXXXXXXXXXXRASNIVFYVDQ 1017
            +ALSGKIMLSA+V+LF+V+ LM+CLH                         +++VFYVD 
Sbjct: 1    FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRR---NHLVFYVDS 57

Query: 1016 RSAPVHTAN---RGLEVSVLNSLPLFVYSELTHKE-LDCAVCLSEFEEGETGRVLPKCHH 849
               P        RGLE +VL SLP+FVYSE TH++ ++CAVCLSEF+E ETGR LPKC+H
Sbjct: 58   AHNPTIVTTQVTRGLEETVLKSLPVFVYSEKTHQDSMECAVCLSEFQENETGRTLPKCNH 117

Query: 848  SFHIECIDMWFHSHSTCPICRARVEPVDPTRTRD-VLIAVDKP---------VQPVEPSG 699
            SFHI CIDMWFHSHSTCP+CR+ VEPV     +D     +  P          Q  E   
Sbjct: 118  SFHIGCIDMWFHSHSTCPLCRSPVEPVTENPVQDGPGYGISVPGSGSSSGTMCQHEEDRV 177

Query: 698  SSSRETSLADRRKGLDLGGVKIEVPRRTESVDE--LRPSSSASYGFMSPGNRLQSLKRIL 525
             S+  +S  DRRK ++L GV IEVPRR  + ++     S SAS+ F SP +R+ S KR+L
Sbjct: 178  GSASTSSFNDRRKQMELIGVTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFKRML 237

Query: 524  SMGKKPALASPSSEIGTSW---MGTTESDIELGITE 426
            S  ++   ASP+     S     GTTE D+E G  E
Sbjct: 238  SRERR-GTASPNVATSVSCGGESGTTEMDVERGQDE 272


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  201 bits (510), Expect = 5e-49
 Identities = 130/286 (45%), Positives = 166/286 (58%), Gaps = 18/286 (6%)
 Frame = -3

Query: 1202 KSYALSGKIMLSAIVVLFVVVALMICLHMXXXXXXXXXXXXXXXXXXXXXXRASNIVFYV 1023
            + YALSGKIMLSAIV+LF VV LM+ LH+                        +++VFYV
Sbjct: 14   EGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRR---THLVFYV 70

Query: 1022 DQRSAPVHTAN---RGLEVSVLNSLPLFVYSELTHKE-LDCAVCLSEFEEGETGRVLPKC 855
            D    P +  +   RGLE +V NSLP+FVYS  TH++ ++CAVCLSEFEE E GRVLPKC
Sbjct: 71   DSAQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQDSIECAVCLSEFEENERGRVLPKC 130

Query: 854  HHSFHIECIDMWFHSHSTCPICRARVEPVDPTRT--------RDVLIAVDKPVQPVEPSG 699
            +HSFH ECIDMWFHSHSTCP+CR+ VEPV              +    +    Q  E   
Sbjct: 131  NHSFHTECIDMWFHSHSTCPLCRSPVEPVAENPVPEGSNFGISEAGSGLCTSCQHEEDHV 190

Query: 698  SSSRETSLADRRKGLDLGGVKIEVPRRTESVDE--LRPSSSASYGFMSPGNRLQSLKRIL 525
             S+  +S  D RK + L GV I+VPRR  + ++     S SAS+ F SP +R+ S KR+L
Sbjct: 191  GSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRMLSFKRML 250

Query: 524  SMGKK----PALASPSSEIGTSWMGTTESDIELGITEDVPAPEQTR 399
            S  ++    P +A+  S  G S  GTTE DIE G   D   P+QTR
Sbjct: 251  SRERRGTVSPTVANSVSCGGGS--GTTEFDIEHG--RDESMPQQTR 292


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
            gi|223544045|gb|EEF45571.1| ring finger protein, putative
            [Ricinus communis]
          Length = 292

 Score =  197 bits (500), Expect = 7e-48
 Identities = 119/281 (42%), Positives = 158/281 (56%), Gaps = 14/281 (4%)
 Frame = -3

Query: 1202 KSYALSGKIMLSAIVVLFVVVALMICLHMXXXXXXXXXXXXXXXXXXXXXXRASNIVFYV 1023
            K YALSGKIMLSAI++LF VV +M+CLH+                        ++++FYV
Sbjct: 16   KGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRR---AHLIFYV 72

Query: 1022 DQRSAP-VHTANRGLEVSVLNSLPLFVYSELTHKE-LDCAVCLSEFEEGETGRVLPKCHH 849
            D  +A  V   +RGL+ +VLN+LP+F YS  TH + ++CAVCLSEFEE E GR LPKC+H
Sbjct: 73   DPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHPDPIECAVCLSEFEENERGRTLPKCNH 132

Query: 848  SFHIECIDMWFHSHSTCPICRARVEPVDPTRTR------------DVLIAVDKPVQPVEP 705
            SFHIECIDMWFHSHSTCP+CR+ VEPV     R             + +        V+ 
Sbjct: 133  SFHIECIDMWFHSHSTCPLCRSAVEPVPEDSVRVNSEINETGSRAGLCVTCQHEENRVDG 192

Query: 704  SGSSSRETSLADRRKGLDLGGVKIEVPRRTESVDELRPSSSASYGFMSPGNRLQSLKRIL 525
              S+S   S   RRK  +  GV IEVPRR   V E  P++ +   + SP +R+ S +RIL
Sbjct: 193  VASTS---SFNGRRKPAEFVGVTIEVPRR-NGVFEDEPATESPSSYRSPMSRMLSFRRIL 248

Query: 524  SMGKKPALASPSSEIGTSWMGTTESDIELGITEDVPAPEQT 402
            S  ++   +SPSS       G T +    G + D+    QT
Sbjct: 249  SRERRGNASSPSS-------GITPASCGCGSSIDIEGTSQT 282


>gb|AAM65773.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 6e-47
 Identities = 130/283 (45%), Positives = 164/283 (57%), Gaps = 27/283 (9%)
 Frame = -3

Query: 1202 KSYALSGKIMLSAIVVLFVVVALMICLHMXXXXXXXXXXXXXXXXXXXXXXRASNIVFYV 1023
            K+YA+SGKIMLSAIV+LF VV LM+ LH+                       A+ + F  
Sbjct: 22   KTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRR-ATMVFFTA 80

Query: 1022 DQRSAPVHT-ANRGLEVSVLNSLPLFVYSELTHKE-LDCAVCLSEFEEGETGRVLPKCHH 849
            D  +A     A+RGL+ +V+ SLP+F +S+ THK+ ++CAVCLSEFEE ETGRVLP C H
Sbjct: 81   DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQH 140

Query: 848  SFHIECIDMWFHSHSTCPICRARVEPV------DPTRTRDVLIAVDK-PVQPVEPSGSSS 690
            +FH++CIDMWFHSHSTCP+CR+ VEP+         R R+V+IAVD  PV  +EPS SS 
Sbjct: 141  TFHVDCIDMWFHSHSTCPLCRSLVEPLAGIESTAAAREREVVIAVDSDPVLVIEPSSSS- 199

Query: 689  RETSLADRRKGL--------DLG--GVKIEVPRRT--ESVDEL-RPSSSASYGFMSPGNR 549
                L D   G         D G     IEVPRRT  E  DEL R  S AS  F SP +R
Sbjct: 200  ---GLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSR 256

Query: 548  LQSLKRILSMGKKPAL-----ASPSSEIGTSWMGTTESDIELG 435
            + S  R+LS  ++ A      A P S   +  +  TESDIE G
Sbjct: 257  MLSFTRMLSRDRRSASSPIAGAPPLSPTLSCRIQMTESDIERG 299


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score =  193 bits (491), Expect = 7e-47
 Identities = 125/286 (43%), Positives = 164/286 (57%), Gaps = 18/286 (6%)
 Frame = -3

Query: 1202 KSYALSGKIMLSAIVVLFVVVALMICLHMXXXXXXXXXXXXXXXXXXXXXXRASNIVFYV 1023
            + YALSGKIMLSAI++LF V+ +M+ LH+                        +++VFYV
Sbjct: 14   EGYALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQVRRVRNRR---THLVFYV 70

Query: 1022 DQRSAPVHTAN---RGLEVSVLNSLPLFVYSELTHKE-LDCAVCLSEFEEGETGRVLPKC 855
            D    P +  +   RGLE +V NSLP+FVY   TH++ ++CAVCLSEFEE E GRVLPKC
Sbjct: 71   DSPQNPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQDSIECAVCLSEFEENERGRVLPKC 130

Query: 854  HHSFHIECIDMWFHSHSTCPICRARVEPVDPTRT--------RDVLIAVDKPVQPVEPSG 699
            +HSFH ECIDMWFHSHSTCP+CR+ VEPV              +    +    Q  E   
Sbjct: 131  NHSFHTECIDMWFHSHSTCPLCRSPVEPVAENPVPEGSNFGISEAGSGLCTSCQHEEDHL 190

Query: 698  SSSRETSLADRRKGLDLGGVKIEVPRRTESVDE--LRPSSSASYGFMSPGNRLQSLKRIL 525
             S+  +S    RK + L GV I+VPRR  + ++     S SAS+ F SP +R+ S KR+L
Sbjct: 191  GSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRMLSFKRML 250

Query: 524  SMGKK----PALASPSSEIGTSWMGTTESDIELGITEDVPAPEQTR 399
            S  ++    P +A+  S  G S  GTTE DIE G   D   P+QTR
Sbjct: 251  SRERRGTVSPTVANSVSCGGGS--GTTEFDIEQG--RDESMPQQTR 292


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