BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00004273
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   263   4e-68
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   254   3e-65
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   253   4e-65
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   245   1e-62
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana...   245   1e-62

>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  263 bits (673), Expect = 4e-68
 Identities = 137/172 (79%), Positives = 154/172 (89%), Gaps = 2/172 (1%)
 Frame = +1

Query: 229 SVIKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEV 408
           + ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEV
Sbjct: 53  ATVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEV 112

Query: 409 SSDLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIER 588
           S+DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ER
Sbjct: 113 SADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLER 172

Query: 589 GSRVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSW--DGDDPDEEGIIYVK 738
           GSRVIAILDR+K+EK +  S D   +SSDL +D+ W  DGDDPD E IIY+K
Sbjct: 173 GSRVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGDGDDPD-ENIIYIK 223


>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  254 bits (649), Expect = 3e-65
 Identities = 139/210 (66%), Positives = 165/210 (78%), Gaps = 1/210 (0%)
 Frame = +1

Query: 112 LITHPRHPSPLCTIIPTNFRPMSGGAMRMTHFTTNRCGRSVIKCMANQRRVKMVAKQIRR 291
           + T  R+  P+ TI+   F   +  +    H    +   + IKCMAN RRVKMVAKQI+R
Sbjct: 14  VFTSQRNSPPITTILHNPFPIWTPKSAASAHLR-QKPFINTIKCMANPRRVKMVAKQIQR 72

Query: 292 ELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEVSSDLQVAKVYVSVFGDERGKD 471
           ELS MLL+D VLQ+A+LPEAALGAD+YLS LTTISDVEVS+DLQV KVYVSVFGD+RGK+
Sbjct: 73  ELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVSTDLQVVKVYVSVFGDDRGKE 132

Query: 472 VAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGSRVIAILDRLKDEKTVVESP 651
           VAI+GLK+KAKYVRSELGRRMKLRLTPEIRFIEDES ERGSRV+AILD++K EK    S 
Sbjct: 133 VAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGSRVLAILDKIKAEKENTGSE 192

Query: 652 DDQDQSSDLTEDN-SWDGDDPDEEGIIYVK 738
           D+  +SSD  +D+  W+GDDPD EGIIYVK
Sbjct: 193 DELSESSDSPQDDRDWEGDDPD-EGIIYVK 221


>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  253 bits (647), Expect = 4e-65
 Identities = 128/159 (80%), Positives = 145/159 (91%)
 Frame = +1

Query: 229 SVIKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEV 408
           + ++CMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLS LTTISDVEV
Sbjct: 53  ATVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEV 112

Query: 409 SSDLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIER 588
           S+DLQV KVYVSVFGDE+GK+VAI+GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ER
Sbjct: 113 SADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLER 172

Query: 589 GSRVIAILDRLKDEKTVVESPDDQDQSSDLTEDNSWDGD 705
           GSRVIAILDR+K+EK +  S D   +SSDL +D+ W+GD
Sbjct: 173 GSRVIAILDRIKNEKKMAGSQDQPSESSDLPQDDDWEGD 211


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  245 bits (626), Expect = 1e-62
 Identities = 130/172 (75%), Positives = 148/172 (86%), Gaps = 2/172 (1%)
 Frame = +1

Query: 229 SVIKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSCLTTISDVEV 408
           + I+CMAN RR+KMVAKQI+RELS MLL+D VLQFA+LPEA+LGAD+YLS LTTI+DVEV
Sbjct: 55  ATIRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEV 114

Query: 409 SSDLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIER 588
           S+DLQV KVYVSVFGDERGKDVAI+GLKSKAKYVRS LG+RMKLRLTPEIRFIEDES ER
Sbjct: 115 SADLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFER 174

Query: 589 GSRVIAILDRLKDEK--TVVESPDDQDQSSDLTEDNSWDGDDPDEEGIIYVK 738
           GSRVIAILDR+KD+K  TV E  D  + S  L +D  W GDD DE+ IIYV+
Sbjct: 175 GSRVIAILDRIKDKKKDTVDEDFDQPELSDALDDDRDWKGDDADED-IIYVQ 225


>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
           gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
           Full=Probable ribosome-binding factor A, chloroplastic;
           Flags: Precursor gi|25082957|gb|AAN72022.1| putative
           protein [Arabidopsis thaliana]
           gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
           thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
           factor A [Arabidopsis thaliana]
          Length = 215

 Score =  245 bits (626), Expect = 1e-62
 Identities = 134/185 (72%), Positives = 154/185 (83%), Gaps = 1/185 (0%)
 Frame = +1

Query: 187 AMRMTHFTTNRCGRSVIKCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGAD 366
           +M   +  TN   R  ++CMAN RRVKMVAKQI RELS MLL+D VLQ AVLPEAALGAD
Sbjct: 35  SMAPVNLRTNLSVRRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGAD 94

Query: 367 RYLSCLTTISDVEVSSDLQVAKVYVSVFGDERGKDVAISGLKSKAKYVRSELGRRMKLRL 546
           RYLS LTTISDVEVS+DLQV KVYVSVFGD+RGKDVAI+GLKSKAKYVRSELG+RMKLRL
Sbjct: 95  RYLSSLTTISDVEVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRL 154

Query: 547 TPEIRFIEDESIERGSRVIAILDRLKDEKTVVESPDDQDQSSDLTEDN-SWDGDDPDEEG 723
           TPE+RFIEDE++ERGSRVIAILD++K EK    S + + + SD TED+  W+ DDPDE+ 
Sbjct: 155 TPEVRFIEDEAMERGSRVIAILDKIKAEK---GSGEGKTEPSDSTEDDQDWEVDDPDED- 210

Query: 724 IIYVK 738
           IIYVK
Sbjct: 211 IIYVK 215