BLASTX nr result

ID: Angelica22_contig00004128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00004128
         (2200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE46416.1| TATA binding protein associated factor [Solanum ...   226   2e-56
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...   226   2e-56
ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-54
ref|XP_003627263.1| Transcription initiation factor TFIID subuni...   217   1e-53
gb|ADL36631.1| C2H2L domain class transcription factor [Malus x ...   216   2e-53

>dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum]
          Length = 638

 Score =  226 bits (576), Expect = 2e-56
 Identities = 125/201 (62%), Positives = 147/201 (73%), Gaps = 8/201 (3%)
 Frame = -1

Query: 904  SPRMATPAGQKSLSLTGSQPDATAXXXXXXXXXXXXXTEASNQLLGKRRIQDLAAQVDPQ 725
            SPRMA PAGQKSLSLTGSQPDAT              TEASNQLLGKR+IQDL +QVD Q
Sbjct: 441  SPRMAAPAGQKSLSLTGSQPDATGSGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDAQ 500

Query: 724  VKLDPEVEEMLLKLADNFIDSVATYACTLAKHRNSSTVESKDVLLHLEKNLGLTIPGYSS 545
             KLDPEVE++LL++AD+FIDSV T+AC LAKHR SST+ESKDVLLHLEKN  LTIPG+SS
Sbjct: 501  GKLDPEVEDLLLEIADDFIDSVTTFACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSS 560

Query: 544  EERKHQENDSSSHAHKIRLDKVRSLMESSNSDT---SNANEVTGQGTGNSAGANHQMRPS 374
            EERKH   +SSS  HK RLD +R+LME+S ++T   S+A E    G G S   NH +RP 
Sbjct: 561  EERKHYPENSSSDLHKKRLDVIRTLMETSQTETSTNSSAKETVRPGAGES---NHMIRPP 617

Query: 373  SSDQLV-----SQVQHQIKRF 326
            SSD +V     SQ+ H++ RF
Sbjct: 618  SSDNMVSQSNASQMLHEMTRF 638



 Score =  124 bits (310), Expect = 1e-25
 Identities = 78/173 (45%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
 Frame = -1

Query: 1615 VGNANLTRSGLMGAQTGXXXXXXXXXXXXXXXXXXXXXS------PRQKTGLAQAGTQFH 1454
            +G+ NL R+ LMG QTG                            PRQK GL Q G QFH
Sbjct: 216  MGSGNLARAALMG-QTGHLPMLSGQAAVAAAAVAQFNLQSQFLNSPRQKAGLMQ-GNQFH 273

Query: 1453 PGNSPAQSLQGMQAMGMMGNFNIGSQIRGNGSIAYTXXXXXXXXXXXXXXXXXXXXXXXX 1274
             GNS  QSLQ   AMGMMG+ N+ SQ+R NG++AY                         
Sbjct: 274  TGNSHGQSLQ---AMGMMGSLNMSSQLRANGALAYAQRVNQSQLRQQQLSQQNSLTTTQK 330

Query: 1273 XQVQSLGRTSFINPQLSGLAQNGQPALIQNTLSQQQWLKQMPAMSAPNSPSYR 1115
               QSL RTSF N QL GL QNGQ A++QN  SQQQWLK MPA+S PNSPS+R
Sbjct: 331  ISAQSLPRTSFANSQLPGLTQNGQSAIMQNNSSQQQWLKPMPAISTPNSPSFR 383


>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
           gi|297743015|emb|CBI35882.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  226 bits (576), Expect = 2e-56
 Identities = 130/203 (64%), Positives = 153/203 (75%), Gaps = 10/203 (4%)
 Frame = -1

Query: 904 SPRMATPAGQKSLSLTGSQPDATAXXXXXXXXXXXXXTEASNQLLGKRRIQDLAAQVDPQ 725
           SPRMA PAGQKSLSLTGSQPDATA             TEASNQLLGKR+IQDL +QVD Q
Sbjct: 385 SPRMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDSQ 444

Query: 724 VKLDPEVEEMLLKLADNFIDSVATYACTLAKHRNSSTVESKDVLLHLEKNLGLTIPGYSS 545
            KLDPEVE++LL++AD+FIDSV T+AC+LAKHR SST+ESKD+LLHLEKN  L IPGYSS
Sbjct: 445 GKLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKNWDLKIPGYSS 504

Query: 544 EERKHQENDSSSHAHKIRLDKVRSLMESSNSDT-SNANEVTGQGTGNS-AGANHQMRPS- 374
           EE+K+Q   SSS  HK R+D VR+LMESS+S+T +NA E+  QG GN+  GAN  MRPS 
Sbjct: 505 EEQKNQTKPSSSELHKKRVDMVRALMESSHSETNANAKEMMRQGLGNNPVGANPMMRPSP 564

Query: 373 --SSDQLV-----SQVQHQIKRF 326
             S++ LV     SQ+  QI RF
Sbjct: 565 SPSAEPLVSQSTSSQMLQQITRF 587



 Score =  136 bits (343), Expect = 2e-29
 Identities = 83/171 (48%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
 Frame = -1

Query: 1612 GNANLTRSGLMGAQTGXXXXXXXXXXXXXXXXXXXXXS--PRQKTGLAQAGTQFHPGNSP 1439
            G  NL+RS LMG QTG                        PRQK GL Q G+QFHPGN+P
Sbjct: 136  GGGNLSRSALMG-QTGHLSPMLSGQAAAAAAVAQFSLLTSPRQKAGLVQ-GSQFHPGNAP 193

Query: 1438 AQSLQGMQAMGMMGNFNIGSQIRGNGSIAYTXXXXXXXXXXXXXXXXXXXXXXXXXQVQS 1259
             QSL GMQA+GMMG  N+ SQ+R NG++ Y                            QS
Sbjct: 194  GQSLSGMQAIGMMGPLNLSSQLRPNGTLTYAQQRINQGQMRQQLTQQSQLTPSQ---AQS 250

Query: 1258 LGRTS---FINPQLSGLAQNGQPALIQNTLSQQQWLKQMPAMSAPNSPSYR 1115
              RTS   F+NPQLS L QNGQP ++QN+LSQQQWLKQMPAMS P SPSYR
Sbjct: 251  RPRTSSLAFMNPQLSSLTQNGQPGMLQNSLSQQQWLKQMPAMSTPGSPSYR 301


>ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|222841572|gb|EEE79119.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  220 bits (560), Expect = 1e-54
 Identities = 120/188 (63%), Positives = 140/188 (74%), Gaps = 3/188 (1%)
 Frame = -1

Query: 904 SPRMATPAGQKSLSLTGSQPDATAXXXXXXXXXXXXXTEASNQLLGKRRIQDLAAQVDPQ 725
           SPRM  P GQK+LSLTGSQPDATA             TEA+NQLLGKR+IQDL +QVD  
Sbjct: 425 SPRMPGPPGQKTLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSH 484

Query: 724 VKLDPEVEEMLLKLADNFIDSVATYACTLAKHRNSSTVESKDVLLHLEKNLGLTIPGYSS 545
            KLDPEVEE+ L++AD+FIDSV  +AC+LAKHR SST+ESKD+LLHLEKN  LTIPG+SS
Sbjct: 485 GKLDPEVEELFLEIADDFIDSVTAFACSLAKHRKSSTLESKDILLHLEKNWHLTIPGFSS 544

Query: 544 EERKHQENDSSSHAHKIRLDKVRSLMESSNSDTSNAN--EVTGQGTGNSAGANHQMRPS- 374
           EERKHQ     S  HK RLD +R+LMESS S+ +N N  E+  QG GN A  NH +RPS 
Sbjct: 545 EERKHQSKPLPSDLHKKRLDMIRALMESSQSEENNINPKEMIRQGHGNPAVTNHLIRPSP 604

Query: 373 SSDQLVSQ 350
           SS+QLVSQ
Sbjct: 605 SSEQLVSQ 612



 Score =  119 bits (298), Expect = 3e-24
 Identities = 78/172 (45%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
 Frame = -1

Query: 1615 VGNANLTRSGLMGAQTGXXXXXXXXXXXXXXXXXXXXXS----PRQKTGLAQAGTQFHPG 1448
            +G ANL+RS L+G QTG                          PRQK GLAQ G+QFH G
Sbjct: 166  LGGANLSRSALLG-QTGHLPMFTGAAAAAAAAQLNLPSQLLASPRQKAGLAQ-GSQFHSG 223

Query: 1447 NSPAQSLQGMQAMGMMGNFNIGSQIRGNGSIAYTXXXXXXXXXXXXXXXXXXXXXXXXXQ 1268
            +SP QSLQG+QAMG+MG+    SQ+R NG++AY                           
Sbjct: 224  DSPGQSLQGIQAMGVMGSSLNLSQLRPNGALAYAQQRMSAGSMRQQLVQQNSLTSQ---- 279

Query: 1267 VQSLGRT---SFINPQLSGLAQNGQPALIQNTLSQQQWLKQMPAMSAPNSPS 1121
            VQSL RT   +++N Q+SGLAQN QP ++Q++LSQQQWLKQMP MS P SPS
Sbjct: 280  VQSLQRTQSLAYMNHQMSGLAQNAQPTMMQSSLSQQQWLKQMPTMSGPASPS 331


>ref|XP_003627263.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
           gi|355521285|gb|AET01739.1| Transcription initiation
           factor TFIID subunit [Medicago truncatula]
          Length = 571

 Score =  217 bits (552), Expect = 1e-53
 Identities = 122/202 (60%), Positives = 147/202 (72%), Gaps = 9/202 (4%)
 Frame = -1

Query: 904 SPRMATPAGQKSLSLTGSQPDATAXXXXXXXXXXXXXTEAS-NQLLGKRRIQDLAAQVDP 728
           SPR+A P GQKS+SLTGSQPDATA             TEA+ NQ+LGKR+IQDL AQVDP
Sbjct: 370 SPRVAGPTGQKSISLTGSQPDATASGATTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDP 429

Query: 727 QVKLDPEVEEMLLKLADNFIDSVATYACTLAKHRNSSTVESKDVLLHLEKNLGLTIPGYS 548
           Q KLDPEV ++LL+ AD+FIDSV T+ C LAKHR SST+ESKD+LLHLEKN  LTIPGYS
Sbjct: 430 QGKLDPEVIDLLLEFADDFIDSVTTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYS 489

Query: 547 SEERKHQENDSSSHAHKIRLDKVRSLMESSN---SDTSNANEVTGQGTGNSAGANHQMRP 377
           SEE+K+Q    S+  HK RLD VR LMESS+   S  +N+ +++ QG  N AG++H MRP
Sbjct: 490 SEEKKYQSRPLSNELHKRRLDAVRMLMESSSVPESIVNNSKDISRQGHPNPAGSHHLMRP 549

Query: 376 SSSDQLV-----SQVQHQIKRF 326
            SSDQLV     SQ+  Q+ RF
Sbjct: 550 LSSDQLVSHSTSSQMLQQMTRF 571



 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 62/129 (48%), Positives = 78/129 (60%), Gaps = 4/129 (3%)
 Frame = -1

Query: 1498 PRQKTGLAQAGTQFHPGNSPAQSLQGMQ-AMGMMGNFNIGSQIRGNGSIAYTXXXXXXXX 1322
            PRQK G+ Q+ +QF   NS  QSLQGMQ A+GMMG+ N+ SQ+R NG + YT        
Sbjct: 163  PRQKGGMVQS-SQFSSANSAGQSLQGMQQAIGMMGSPNLASQMRTNGGL-YTQQQQIRLT 220

Query: 1321 XXXXXXXXXXXXXXXXXQVQSLGRTS---FINPQLSGLAQNGQPALIQNTLSQQQWLKQM 1151
                              VQ + R+S   F+N QLSGL+QNGQP ++ N+L+Q QWLKQM
Sbjct: 221  PAQMRQQLSQQALNSQQ-VQGIPRSSSLAFMNSQLSGLSQNGQPGMMHNSLTQSQWLKQM 279

Query: 1150 PAMSAPNSP 1124
            PAMS P SP
Sbjct: 280  PAMSGPASP 288


>gb|ADL36631.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 630

 Score =  216 bits (550), Expect = 2e-53
 Identities = 119/187 (63%), Positives = 140/187 (74%), Gaps = 2/187 (1%)
 Frame = -1

Query: 904 SPRMATPAGQKSLSLTGSQPDATAXXXXXXXXXXXXXTEASNQLLGKRRIQDLAAQVDPQ 725
           SPRMA PAGQKSLSLTGS PDA A             TEA+NQLLGKR+IQDL +QVD Q
Sbjct: 431 SPRMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQ 490

Query: 724 VKLDPEVEEMLLKLADNFIDSVATYACTLAKHRNSSTVESKDVLLHLEKNLGLTIPGYSS 545
            +LDPEVE++LL++AD+FIDSV TYAC LAKHR SST+ESKDVLLHLEKN  LTIPG+SS
Sbjct: 491 GRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKNWHLTIPGFSS 550

Query: 544 EERKHQENDSSSHAHKIRLDKVRSLMESSNSDTS-NANEVTGQGTGNSAGANHQMRPS-S 371
           EERK Q    SS  HK RLD +R+LMESSN + + N  +   +G GN+ G NH +RPS  
Sbjct: 551 EERKCQNKSLSSDLHKKRLDVIRTLMESSNLEKNPNTPKEMIRGFGNAVGTNHLIRPSLG 610

Query: 370 SDQLVSQ 350
           ++QLVSQ
Sbjct: 611 AEQLVSQ 617



 Score =  124 bits (311), Expect = 1e-25
 Identities = 81/171 (47%), Positives = 96/171 (56%), Gaps = 6/171 (3%)
 Frame = -1

Query: 1615 VGNANLTRSGLMGAQTGXXXXXXXXXXXXXXXXXXXXXS---PRQKTGLAQAGTQFHPGN 1445
            +G  NL+RS L+G Q+G                         PRQK  L Q G+QFH GN
Sbjct: 181  LGGGNLSRSALIG-QSGHLPMLSGPAAVAAAQFNLQPQLLASPRQKGSLVQ-GSQFHHGN 238

Query: 1444 SPAQSLQGMQAMGMMGNFNIGSQIRGNGSIAYTXXXXXXXXXXXXXXXXXXXXXXXXXQV 1265
            SP QSLQG QAMG+MG+ N+ SQ+R NG+IA                           QV
Sbjct: 239  SPGQSLQGTQAMGVMGSINLSSQLRANGAIASFAQQRINQGQGQLRQQLAQQSPLTSAQV 298

Query: 1264 QSLGRT---SFINPQLSGLAQNGQPALIQNTLSQQQWLKQMPAMSAPNSPS 1121
            QSL RT   SF+NPQLSG++QNGQPA+IQN+LS QQWLKQMPA   P SPS
Sbjct: 299  QSLPRTSSLSFMNPQLSGVSQNGQPAMIQNSLS-QQWLKQMPASPGPGSPS 348


Top