BLASTX nr result
ID: Angelica22_contig00004088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00004088
(1290 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis th... 624 e-176
ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis... 621 e-175
ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254... 619 e-175
ref|XP_002533159.1| RNA binding protein, putative [Ricinus commu... 617 e-174
ref|XP_003564439.1| PREDICTED: uncharacterized protein LOC100822... 612 e-173
>ref|NP_195467.1| Ribonuclease III family protein [Arabidopsis thaliana]
gi|4468817|emb|CAB38218.1| putative protein [Arabidopsis
thaliana] gi|7270733|emb|CAB80416.1| putative protein
[Arabidopsis thaliana] gi|95147308|gb|ABF57289.1|
At4g37510 [Arabidopsis thaliana]
gi|332661403|gb|AEE86803.1| Ribonuclease III family
protein [Arabidopsis thaliana]
Length = 537
Score = 624 bits (1610), Expect = e-176
Identities = 291/340 (85%), Positives = 317/340 (93%)
Frame = +3
Query: 36 IGKRYLPKWIKEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKAASLQNLVFPFDNMDR 215
+G+ L + EFFLQRYPRESPGPMRERV+ALIGKRYLPKWIKAASLQNL+FP+D+MD+
Sbjct: 198 LGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDK 257
Query: 216 LVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDEECQPKLRRQLEDVDH 395
L+RK+REPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDP+ +ECQP+ RRQLEDVD+
Sbjct: 258 LIRKEREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDY 317
Query: 396 VSVEFEERKITWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKL 575
VSVEFE +K+ WQD+A YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P VM+ L
Sbjct: 318 VSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTL 377
Query: 576 GYPLAMKDRIPEITEARNIELGLGLQLAFLHPSMHKFDHPRFCFERLEYVGQKIQDLVMA 755
GYPL M DRI EITEARNIELGLGLQL FLHPS HKF+HPRFCFERLEYVGQKIQD+ MA
Sbjct: 378 GYPLTMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMA 437
Query: 756 ERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNP 935
ERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLREK LH FIIYS EV D+YEHNRRLRNP
Sbjct: 438 ERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFIIYSEEVHDRYEHNRRLRNP 497
Query: 936 ATTAVQQAIHGLSYTIYGKPDVRRLMFELFDFEQIQPKAV 1055
ATTAVQQAIHGL+YTIYGKPDVRRLMFE+FDFEQIQPKAV
Sbjct: 498 ATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537
Score = 62.8 bits (151), Expect = 2e-07
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Frame = +3
Query: 456 PEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKLGYPLAMKDRIPEITEARNIE 635
P+ +L + P L +C+P W + V + LGY L + + + A++ +
Sbjct: 110 PQLSLKSFP-LLSSCLPSSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFD 168
Query: 636 LGLGLQLAFLHPSMH--KFDHPRFCFERLEYVGQKIQDLVMAERLLMKH-LDAPGRWLQE 806
L LAF HPS + H + RL ++GQ + +L + E L ++ ++PG ++E
Sbjct: 169 --TLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGP-MRE 225
Query: 807 KHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNPATTAVQQAIHGLSYTIY 986
+ L+ ++ ++++ +L I D + R+ R P +V A+ G Y +
Sbjct: 226 RVFALIGKRYLPKWIKAASLQNLIF---PYDDMDKLIRKEREPPVKSVFWALFGAIYLCF 282
Query: 987 GKPDVRRLMFELF----DFEQIQPKA 1052
G P+V R++FE+F D ++ QP++
Sbjct: 283 GMPEVYRVLFEVFGMDPDADECQPRS 308
>ref|XP_002866942.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312778|gb|EFH43201.1| ribonuclease III family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 537
Score = 621 bits (1601), Expect = e-175
Identities = 289/340 (85%), Positives = 316/340 (92%)
Frame = +3
Query: 36 IGKRYLPKWIKEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKAASLQNLVFPFDNMDR 215
+G+ L + EFFLQRYPRESPGPMRERV+ALIGKRYLPKWIKAASLQNL+FP+D+MD+
Sbjct: 198 LGQYVLELALTEFFLQRYPRESPGPMRERVFALIGKRYLPKWIKAASLQNLIFPYDDMDK 257
Query: 216 LVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDEECQPKLRRQLEDVDH 395
L+RK+REPPVKSVFWALFGAIYLC+GMPEVYRVLFEVFGMDP+ +ECQP+ RRQLEDVD+
Sbjct: 258 LIRKEREPPVKSVFWALFGAIYLCYGMPEVYRVLFEVFGMDPDADECQPRSRRQLEDVDY 317
Query: 396 VSVEFEERKITWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKL 575
VSVEFE +K+ WQD+A YKPPEDALFAHPRLFRACVPPGMHRFRGNIWD+DS+P VM+ L
Sbjct: 318 VSVEFEGKKLGWQDIATYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDFDSKPKVMQTL 377
Query: 576 GYPLAMKDRIPEITEARNIELGLGLQLAFLHPSMHKFDHPRFCFERLEYVGQKIQDLVMA 755
GYPL M DRI EITEARNIELGLGLQL FLHPS HKF+HPRFCFERLEYVGQKIQD+ MA
Sbjct: 378 GYPLPMNDRIKEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDIAMA 437
Query: 756 ERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNP 935
ERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLREK LH FI YS EV D+YEHNRRLRNP
Sbjct: 438 ERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKRLHNFITYSEEVHDRYEHNRRLRNP 497
Query: 936 ATTAVQQAIHGLSYTIYGKPDVRRLMFELFDFEQIQPKAV 1055
ATTAVQQAIHGL+YTIYGKPDVRRLMFE+FDFEQIQPKAV
Sbjct: 498 ATTAVQQAIHGLAYTIYGKPDVRRLMFEVFDFEQIQPKAV 537
Score = 64.3 bits (155), Expect = 6e-08
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Frame = +3
Query: 456 PEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKLGYPLAMKDRIPEITEARNIE 635
P+ +L + P L +C+P W + V + LGY L + + + A++ +
Sbjct: 110 PQLSLKSFP-LLSSCLPSSKLNNADKTWIDEYLLEVKQALGYSLEPSESLGDDNPAKHFD 168
Query: 636 LGLGLQLAFLHPSMH--KFDHPRFCFERLEYVGQKIQDLVMAERLLMKH-LDAPGRWLQE 806
L LAF HPS + H + RL ++GQ + +L + E L ++ ++PG ++E
Sbjct: 169 --TLLYLAFQHPSCDRARARHVKNGHSRLWFLGQYVLELALTEFFLQRYPRESPGP-MRE 225
Query: 807 KHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNPATTAVQQAIHGLSYTIY 986
+ L+ ++ ++++ +L I D + R+ R P +V A+ G Y Y
Sbjct: 226 RVFALIGKRYLPKWIKAASLQNLIF---PYDDMDKLIRKEREPPVKSVFWALFGAIYLCY 282
Query: 987 GKPDVRRLMFELF----DFEQIQPKA 1052
G P+V R++FE+F D ++ QP++
Sbjct: 283 GMPEVYRVLFEVFGMDPDADECQPRS 308
>ref|XP_002284222.1| PREDICTED: uncharacterized protein LOC100254381 [Vitis vinifera]
Length = 542
Score = 619 bits (1596), Expect = e-175
Identities = 290/341 (85%), Positives = 315/341 (92%)
Frame = +3
Query: 36 IGKRYLPKWIKEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKAASLQNLVFPFDNMDR 215
+G+ L E+FLQRYPRESP PMRERV+ LIGKR LP+WIKAASLQNLVFPFD+MDR
Sbjct: 200 LGQYVLELAFAEYFLQRYPRESPAPMRERVFELIGKRNLPQWIKAASLQNLVFPFDDMDR 259
Query: 216 LVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDEECQPKLRRQLEDVDH 395
L+RK+REPPVKSVFWALFGAIYLC+GMPEVYRVLFEVFGMDPE E+CQPKLRRQLEDVD+
Sbjct: 260 LIRKEREPPVKSVFWALFGAIYLCYGMPEVYRVLFEVFGMDPEHEDCQPKLRRQLEDVDY 319
Query: 396 VSVEFEERKITWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKL 575
VSVEFE K++WQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYD RP VM L
Sbjct: 320 VSVEFENNKLSWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDCRPQVMHAL 379
Query: 576 GYPLAMKDRIPEITEARNIELGLGLQLAFLHPSMHKFDHPRFCFERLEYVGQKIQDLVMA 755
GYPL + DRIP+IT+ARNIELGLGLQL FLHPS HKF+HPRFC+ERLEYVGQKIQD+VMA
Sbjct: 380 GYPLPVTDRIPDITKARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYVGQKIQDIVMA 439
Query: 756 ERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNP 935
ERLLMKHLDAPG+WLQEKHRRLLMNKFCGRYLR+K LHRFIIYS +VQD YEHNRRLRNP
Sbjct: 440 ERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLRDKYLHRFIIYSEQVQDSYEHNRRLRNP 499
Query: 936 ATTAVQQAIHGLSYTIYGKPDVRRLMFELFDFEQIQPKAVV 1058
ATTAVQQAIHGLSY +YGKPDVRRLMFE+FDFEQIQPK V+
Sbjct: 500 ATTAVQQAIHGLSYLVYGKPDVRRLMFEVFDFEQIQPKPVL 540
Score = 66.6 bits (161), Expect = 1e-08
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Frame = +3
Query: 456 PEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKLGYPLAMKDRIPEITEARNIE 635
P+ +L + P L +C+P W + + LGYPL D+ + A+ +
Sbjct: 112 PQLSLKSFP-LLSSCLPSSRLNNADKAWIDEYLLEAKQALGYPLEPSDQYGDDNPAKQFD 170
Query: 636 LGLGLQLAFLHPSMHKFD--HPRFCFERLEYVGQKIQDLVMAERLLMKHLDAPGRWLQEK 809
L LAF HPS + + H R RL ++GQ + +L AE L ++ ++E+
Sbjct: 171 --ALLYLAFQHPSCDRANARHVRSGHSRLWFLGQYVLELAFAEYFLQRYPRESPAPMRER 228
Query: 810 HRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNPATTAVQQAIHGLSYTIYG 989
L+ + ++++ +L + D R+ R P +V A+ G Y YG
Sbjct: 229 VFELIGKRNLPQWIKAASLQNLVF---PFDDMDRLIRKEREPPVKSVFWALFGAIYLCYG 285
Query: 990 KPDVRRLMFELF----DFEQIQPK 1049
P+V R++FE+F + E QPK
Sbjct: 286 MPEVYRVLFEVFGMDPEHEDCQPK 309
>ref|XP_002533159.1| RNA binding protein, putative [Ricinus communis]
gi|223527031|gb|EEF29218.1| RNA binding protein, putative
[Ricinus communis]
Length = 532
Score = 617 bits (1591), Expect = e-174
Identities = 289/340 (85%), Positives = 319/340 (93%)
Frame = +3
Query: 36 IGKRYLPKWIKEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKAASLQNLVFPFDNMDR 215
+G+ L EFFLQRYPRESP PMRERV+ALIGKR LPKWIKAASLQNL+FP+D++D+
Sbjct: 193 LGQYVLELAFCEFFLQRYPRESPAPMRERVFALIGKRNLPKWIKAASLQNLIFPYDDIDK 252
Query: 216 LVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDEECQPKLRRQLEDVDH 395
L+RKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPE E+CQPKLRRQLEDVD+
Sbjct: 253 LLRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEAEDCQPKLRRQLEDVDY 312
Query: 396 VSVEFEERKITWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKL 575
VSVEFE K++WQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRP VM+ L
Sbjct: 313 VSVEFEGNKLSWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPKVMKTL 372
Query: 576 GYPLAMKDRIPEITEARNIELGLGLQLAFLHPSMHKFDHPRFCFERLEYVGQKIQDLVMA 755
GYPLAM DRIP+ITEARNIELGLGLQL FLHPS +KF+HPRFC+ERLE+VGQKIQDLV+A
Sbjct: 373 GYPLAMSDRIPDITEARNIELGLGLQLCFLHPSKYKFEHPRFCYERLEFVGQKIQDLVLA 432
Query: 756 ERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNP 935
ERLLMKHLDAPG+WLQE+HRRLLMNKFCGRYLR+K+LH FI+YS +V D YE+NRRLRNP
Sbjct: 433 ERLLMKHLDAPGKWLQERHRRLLMNKFCGRYLRDKHLHHFIVYSEQVIDAYENNRRLRNP 492
Query: 936 ATTAVQQAIHGLSYTIYGKPDVRRLMFELFDFEQIQPKAV 1055
ATTAVQQA+HGLSYT+YGKPDVRRLMFE+FDFEQIQPKAV
Sbjct: 493 ATTAVQQALHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV 532
>ref|XP_003564439.1| PREDICTED: uncharacterized protein LOC100822105 [Brachypodium
distachyon]
Length = 529
Score = 612 bits (1578), Expect = e-173
Identities = 281/340 (82%), Positives = 314/340 (92%)
Frame = +3
Query: 36 IGKRYLPKWIKEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKAASLQNLVFPFDNMDR 215
+G+ L EFFLQRYPRESPGPMRERV+ALIGKR LP+W+KAASL NLVFP+DN+DR
Sbjct: 190 LGQFVLELAFSEFFLQRYPRESPGPMRERVFALIGKRMLPRWLKAASLHNLVFPYDNLDR 249
Query: 216 LVRKDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPEDEECQPKLRRQLEDVDH 395
++RKDREPP K+VFWALFGAIYLCFGMPEVYRVLFE FGMDPE+E CQPKLRRQLEDVD+
Sbjct: 250 MIRKDREPPTKAVFWALFGAIYLCFGMPEVYRVLFEAFGMDPEEESCQPKLRRQLEDVDY 309
Query: 396 VSVEFEERKITWQDVAAYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPHVMEKL 575
VSVEFE+R++TWQDVAAY+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP VM L
Sbjct: 310 VSVEFEKRQLTWQDVAAYRPPADALFAHPRLFRACVPPGMHRFRGNIWDFDNRPKVMNIL 369
Query: 576 GYPLAMKDRIPEITEARNIELGLGLQLAFLHPSMHKFDHPRFCFERLEYVGQKIQDLVMA 755
GYPL M DRIPEITEARNIELGLGLQL FLHPS HKF+HPRFCFERLEYVGQKIQDLV+A
Sbjct: 370 GYPLPMNDRIPEITEARNIELGLGLQLCFLHPSKHKFEHPRFCFERLEYVGQKIQDLVLA 429
Query: 756 ERLLMKHLDAPGRWLQEKHRRLLMNKFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNP 935
ERLLMKHLDAPGRWL EKHRR+LMNK+CGRYLR+K+LH +IIY VQD++EHNRRLRNP
Sbjct: 430 ERLLMKHLDAPGRWLGEKHRRMLMNKYCGRYLRDKHLHHYIIYGESVQDRFEHNRRLRNP 489
Query: 936 ATTAVQQAIHGLSYTIYGKPDVRRLMFELFDFEQIQPKAV 1055
+TTAVQQAIHGL+Y +YGKPDVRRLMFE+FDFEQ+QPKA+
Sbjct: 490 STTAVQQAIHGLAYCVYGKPDVRRLMFEVFDFEQVQPKAI 529
Score = 65.1 bits (157), Expect = 4e-08
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Frame = +3
Query: 486 LFRACVPPGMHRFRGNIWDYDSRPHVMEKLGYPLAMKDRIPEITE--ARNIELGLGLQLA 659
L +C+P W + + LGYPLA + + + + AR+ ++ L L
Sbjct: 107 LLSSCLPSSPLSAADRTWMDEYLLEAKQALGYPLAPSETLGDGDDCPARHFDVLLYLAFQ 166
Query: 660 FLHPSMH--KFDHPRFCFERLEYVGQKIQDLVMAERLLMKH-LDAPGRWLQEKHRRLLMN 830
L PS + H R RL ++GQ + +L +E L ++ ++PG ++E+ L+
Sbjct: 167 HLDPSCERTRTRHVRNGHSRLWFLGQFVLELAFSEFFLQRYPRESPGP-MRERVFALIGK 225
Query: 831 KFCGRYLREKNLHRFIIYSNEVQDQYEHNRRLRNPATTAVQQAIHGLSYTIYGKPDVRRL 1010
+ R+L+ +LH + + + R+ R P T AV A+ G Y +G P+V R+
Sbjct: 226 RMLPRWLKAASLHNLVFPYDNLDRMI---RKDREPPTKAVFWALFGAIYLCFGMPEVYRV 282
Query: 1011 MFELF----DFEQIQPK 1049
+FE F + E QPK
Sbjct: 283 LFEAFGMDPEEESCQPK 299