BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00004020
         (3826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb...  1823   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1632   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1627   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1623   0.0  
ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|2228572...  1619   0.0  

>sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb|CAA53165.1| phytochrome A
            [Petroselinum crispum]
          Length = 1129

 Score = 1823 bits (4722), Expect = 0.0
 Identities = 917/1127 (81%), Positives = 995/1127 (88%), Gaps = 3/1127 (0%)
 Frame = -3

Query: 3566 MSTSRPANSSTNSARATQNSRVVLTTIDAKLHAXXXXXXXXXXXXXSVRATTA--ENLSV 3393
            MS+SRPANSS+N  RA QN+RVVLTT+DAK+HA             SVR T+A  EN S+
Sbjct: 1    MSSSRPANSSSNPGRANQNARVVLTTLDAKIHADFEESGNSFDYSSSVRVTSAVGENSSI 60

Query: 3392 RSHQLTNAYLHQIQKGKFIQSFGCLLAVDEKSLKIMAYSENAPEMLTMVNHAVPTVNEHQ 3213
            +S++LT AYLH IQKGK IQ  GCLLAVDEKS KIMAYSENAPEMLTMV+HAVP+V EH 
Sbjct: 61   QSNKLTTAYLHHIQKGKLIQPVGCLLAVDEKSFKIMAYSENAPEMLTMVSHAVPSVGEHP 120

Query: 3212 ILGIGTDLRTIFTVPSAAALQKAVGFTDINLLNPILVHCKTSGKPYYAIAHRVTGSLIID 3033
            +LGIGTD+RTIFT PSAAALQKAVGFTDINLLNPILVHCKTSGKP+YAIAHRVTGSLIID
Sbjct: 121  VLGIGTDVRTIFTAPSAAALQKAVGFTDINLLNPILVHCKTSGKPFYAIAHRVTGSLIID 180

Query: 3032 FEPVKPYEVPMTAAGALQSYKLASKSVNRLQALSGGSMERLCDTMVQEVFELTGYDRVMA 2853
            FEPVKPYEVPMTAAGALQSYKLASK+VNRLQAL GGSMERLCDTMVQEVFELTGYDRVMA
Sbjct: 181  FEPVKPYEVPMTAAGALQSYKLASKAVNRLQALPGGSMERLCDTMVQEVFELTGYDRVMA 240

Query: 2852 YKFHDDDHGEVTAEITKPDLEPYLGLHYPATDIPQAARFLFLKNKVRIICDCRAKNVKVL 2673
            YKFHDDDHGEVTAE+TKP LEPY GLHYPATD+PQAARFLFLKNKVR+ICDCRA +  VL
Sbjct: 241  YKFHDDDHGEVTAEVTKPGLEPYFGLHYPATDVPQAARFLFLKNKVRMICDCRANSAPVL 300

Query: 2672 QDENLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEIGETSDSNNIKSK 2493
            QDE LPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDE+ E+SD N++KSK
Sbjct: 301  QDEKLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEVVESSDRNSVKSK 360

Query: 2492 KLWGLVVCHNTSPRFVPFPLRYACEFLAQVFSIHVSKELELKNQIAEKNILRTQTLLCDL 2313
            KLWGLVVCHNTSPRFVPFPLRYACEFLAQVF+IHVSKELEL+NQI EKNILRTQTLLCDL
Sbjct: 361  KLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILRTQTLLCDL 420

Query: 2312 LMRDAPLGIVSQSPNMMDLVKCDGAALLFKNKVYRLGATPSDYQLMDIVSWLNEYHMDST 2133
            LMRDAPLGIVSQSPNMMDLVKCDGAALL+KNKVYRLGATPSDYQL DIVSWL EYH DST
Sbjct: 421  LMRDAPLGIVSQSPNMMDLVKCDGAALLYKNKVYRLGATPSDYQLRDIVSWLTEYHTDST 480

Query: 2132 GLSTDSLYDAGFPGALALGDVVCGMAVVKITSHDMLFWFRSPAAGHIRWGGAMHDPDEKD 1953
            GLSTDSLYDAG+PGALALGDVVCGMAVVKITSHDMLFWFRS AAGHIRWGGA  +PDE  
Sbjct: 481  GLSTDSLYDAGYPGALALGDVVCGMAVVKITSHDMLFWFRSHAAGHIRWGGAKAEPDENH 540

Query: 1952 DGRKMHPRSSFKAFLEVVKTRSSTWKDLEMDAIHSLQLILRKALNDEKAIVPNGNESHMN 1773
            DGRKMHPRSSFKAFLEVVKTRS+TWK+ EMDAIHSLQLILRKAL+ EKA+   G+E   N
Sbjct: 541  DGRKMHPRSSFKAFLEVVKTRSTTWKEFEMDAIHSLQLILRKALSVEKAVAAQGDEIRSN 600

Query: 1772 TSAIQTKLSDLNIDGIQELEAVTSEMVRLIETATVPIFAVDANQIVNGWNMKIAELTGLP 1593
            T  I TKL+DL I+GIQELEAVTSEMVRLIETATVPIFAVDA++IVNGWN KIAELTGLP
Sbjct: 601  TDVIHTKLNDLKIEGIQELEAVTSEMVRLIETATVPIFAVDADEIVNGWNTKIAELTGLP 660

Query: 1592 VDKAIGQHLLTLVEDSSIDTVETMLALALQGKEEQGIQFEFKTHGSREDSGSISLVVNAC 1413
            VD+A+G+HLLTLVEDSS+ TV  +LALALQGKEEQGI FEFKT+GSREDS  I++VVNAC
Sbjct: 661  VDQAMGKHLLTLVEDSSVGTVVFLLALALQGKEEQGIPFEFKTYGSREDSVPITVVVNAC 720

Query: 1412 ANRGLHDNVVGVCFVAQDVTGHKTIMDKFTRVEGDYKAIVHNPNPLIPPIFGTDEFGWCF 1233
            A RGLHDNVVGVCFVAQDVT  KTIMDKFTR++GDYKAIV NPNPLIPPIFGTDEFGWC 
Sbjct: 721  ATRGLHDNVVGVCFVAQDVTSQKTIMDKFTRIQGDYKAIVQNPNPLIPPIFGTDEFGWCS 780

Query: 1232 EWNQAMSELSGWHKEEVIDKMLLGEIFGVQASCCRLKSKEAFVNLGVALNNAMTGQTSEK 1053
            EWNQAM+ELSGW +E+V++KMLLGEIFG+Q SCC LKSKEAFVNLGV LNNA+TGQ SEK
Sbjct: 781  EWNQAMTELSGWRREDVMNKMLLGEIFGIQTSCCHLKSKEAFVNLGVVLNNALTGQISEK 840

Query: 1052 IRFGFFARDGKYVECLLCASKKLDGDGTVTGIFCFXXXXXXXXXXXLHIQHLAEQIAVKR 873
            I F FFA DGKYVECLLCASKKL G+GTVTGIFCF           LHIQ L EQ A+KR
Sbjct: 841  ICFSFFATDGKYVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKR 900

Query: 872  LKVLAYLRRQSKNPLAGINFIRTKLEEANLGEEQKKLLRTSGHCQLQLNKXXXXXXXXXX 693
            LK L+YLRRQ+KNPL GINF+R KLEE  +GEEQ KL RTS HCQ  +NK          
Sbjct: 901  LKTLSYLRRQAKNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSI 960

Query: 692  XDGYLDLEMSEFMLQDVYVAARSQVIMKSSGKAIQIVDTFSKEIMSVTLYGDSLRLQQVL 513
             DGYLDLEMSEF L DVYVA+RSQV M+S+GKAIQ+VD FS+E+MS TLYGDSLRLQ+VL
Sbjct: 961  IDGYLDLEMSEFRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVL 1020

Query: 512  ADFLMICVNFTPLGGLLGISATSTKDNLGQSVQLVRLEFRITHAGA-VPEDLLSQMFGSN 336
            ADF+ +CVN TP+GG LGIS T T+DNLGQSVQLV LEFRITH GA VPE+ +SQMFGS+
Sbjct: 1021 ADFMSVCVNLTPVGGHLGISVTLTEDNLGQSVQLVHLEFRITHTGAGVPEEAVSQMFGSD 1080

Query: 335  SETSEEGVSLLISRKLVKLMNGDVHYLREAGKSTFIISVELAGVGKR 195
            SETSEEG+SLLISRKLVKLMNGDVHYLREAGKSTFII+VELA   KR
Sbjct: 1081 SETSEEGISLLISRKLVKLMNGDVHYLREAGKSTFIITVELAAASKR 1127


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1632 bits (4225), Expect = 0.0
 Identities = 818/1128 (72%), Positives = 945/1128 (83%), Gaps = 4/1128 (0%)
 Frame = -3

Query: 3566 MSTSRPANSSTNSARATQNSRVVL-TTIDAKLHAXXXXXXXXXXXXXSVRATTAE-NLSV 3393
            MS+SRP  SS+ S R+  ++R++  TT+DAKLHA             SVR T A  +   
Sbjct: 1    MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQP 60

Query: 3392 RSHQLTNAYLHQIQKGKFIQSFGCLLAVDEKSLKIMAYSENAPEMLTMVNHAVPTVNEHQ 3213
            RS ++T AYLH IQKGK IQ FG LLA+DEK+ K++AYSENAPEMLTMV+HAVP+V EH 
Sbjct: 61   RSDKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHP 120

Query: 3212 ILGIGTDLRTIFTVPSAAALQKAVGFTDINLLNPILVHCKTSGKPYYAIAHRVTGSLIID 3033
            +LGIGTD+RTIF+ PSA+AL KA+GF +++LLNPILVHCKTSGKP+YAI HRVTGSLIID
Sbjct: 121  VLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 180

Query: 3032 FEPVKPYEVPMTAAGALQSYKLASKSVNRLQALSGGSMERLCDTMVQEVFELTGYDRVMA 2853
            FEPVKPYEVPMTAAGALQSYKLA+K++ RLQ+L  GS+ERLCDTMVQEVFELTGYDRVMA
Sbjct: 181  FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMA 240

Query: 2852 YKFHDDDHGEVTAEITKPDLEPYLGLHYPATDIPQAARFLFLKNKVRIICDCRAKNVKVL 2673
            YKFHDDDHGEV +EITKP LEPYLGLHYPATDIPQAARFLF+KNKVR+ICDCRAK+++VL
Sbjct: 241  YKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVL 300

Query: 2672 QDENLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEIGETSDSNNI-KS 2496
            QDE LPF+LTLCGSTLRAPHSCH+QYMENMNSIASLVMAVV+ND DE GE+S+S    K 
Sbjct: 301  QDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKR 360

Query: 2495 KKLWGLVVCHNTSPRFVPFPLRYACEFLAQVFSIHVSKELELKNQIAEKNILRTQTLLCD 2316
            K+LWGLVVCH+T+PRFVPFPLRYACEFLAQVF+IHV+KELEL++QI EKNILRTQTLLCD
Sbjct: 361  KRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCD 420

Query: 2315 LLMRDAPLGIVSQSPNMMDLVKCDGAALLFKNKVYRLGATPSDYQLMDIVSWLNEYHMDS 2136
            +LMRDAPLGIVSQSPN+MDLVKCDGAALL+KNKV+RLG TPSD+QL DI SWL+EYHMDS
Sbjct: 421  MLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDS 480

Query: 2135 TGLSTDSLYDAGFPGALALGDVVCGMAVVKITSHDMLFWFRSPAAGHIRWGGAMHDPDEK 1956
            TGLSTDSLYDAG+PGALALGD VCGMA VKITS D LFWFRS  A  +RWGGA H+P EK
Sbjct: 481  TGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEK 540

Query: 1955 DDGRKMHPRSSFKAFLEVVKTRSSTWKDLEMDAIHSLQLILRKALNDEKAIVPNGNESHM 1776
            DDGRKMHPRSSFKAFLEVVKTRS  WKD EMDAIHSLQLILR A  D +A+        +
Sbjct: 541  DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAM-------DV 593

Query: 1775 NTSAIQTKLSDLNIDGIQELEAVTSEMVRLIETATVPIFAVDANQIVNGWNMKIAELTGL 1596
            NT+AI TKL+DL I+G+QELEAVTSEMVRLIETA+VPI AVD + +VNGWN KI+ELT L
Sbjct: 594  NTNAIHTKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSL 653

Query: 1595 PVDKAIGQHLLTLVEDSSIDTVETMLALALQGKEEQGIQFEFKTHGSREDSGSISLVVNA 1416
            PVDKAIG HLLTLVEDSS DTV+ ML LALQG+EEQ +QFE KTHGS+ DSG ISLVVNA
Sbjct: 654  PVDKAIGMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNA 713

Query: 1415 CANRGLHDNVVGVCFVAQDVTGHKTIMDKFTRVEGDYKAIVHNPNPLIPPIFGTDEFGWC 1236
            CA+R LH+NVVGVCFVAQD+T  KT+MDKFTR+EGDYKAIV NPNPLIPPIFGTDEFGWC
Sbjct: 714  CASRDLHENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWC 773

Query: 1235 FEWNQAMSELSGWHKEEVIDKMLLGEIFGVQASCCRLKSKEAFVNLGVALNNAMTGQTSE 1056
             EWN AM +LSGW++EEV+DKMLLGE+FG   +CCRLK++EAFV LG+ LN+ MTG+ SE
Sbjct: 774  SEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESE 833

Query: 1055 KIRFGFFARDGKYVECLLCASKKLDGDGTVTGIFCFXXXXXXXXXXXLHIQHLAEQIAVK 876
            K+ FGFF++ GKYVECLL  SKKLD +G VTG+FCF           LHIQ L+EQ A+K
Sbjct: 834  KVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALK 893

Query: 875  RLKVLAYLRRQSKNPLAGINFIRTKLEEANLGEEQKKLLRTSGHCQLQLNKXXXXXXXXX 696
            RLK LAY++RQ KNPL+GI F R  +E+ +LGEEQ+++L TS  CQ QL+K         
Sbjct: 894  RLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDS 953

Query: 695  XXDGYLDLEMSEFMLQDVYVAARSQVIMKSSGKAIQIVDTFSKEIMSVTLYGDSLRLQQV 516
              +GYLDLEM EF L++V VA+ SQV++KS+GK IQIV+   + IM+ TLYGD LRLQQV
Sbjct: 954  IIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQV 1013

Query: 515  LADFLMICVNFTPLGGLLGISATSTKDNLGQSVQLVRLEFRITHAG-AVPEDLLSQMFGS 339
            LADFL+I VNFTP GG L ++A+  KD LG+SV LV LE RITHAG  VPE LL+QMFG+
Sbjct: 1014 LADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGN 1073

Query: 338  NSETSEEGVSLLISRKLVKLMNGDVHYLREAGKSTFIISVELAGVGKR 195
            N + SEEG+SLLISRKLVKLMNGDV YLREAGKSTFIIS+ELA   K+
Sbjct: 1074 NGDASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARKK 1121


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1627 bits (4213), Expect = 0.0
 Identities = 816/1128 (72%), Positives = 944/1128 (83%), Gaps = 4/1128 (0%)
 Frame = -3

Query: 3566 MSTSRPANSSTNSARATQNSRVVL-TTIDAKLHAXXXXXXXXXXXXXSVRATTAE-NLSV 3393
            MS+SRP  SS+ S R+  ++R++  TT+DAKLHA             SVR T A  +   
Sbjct: 1    MSSSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQP 60

Query: 3392 RSHQLTNAYLHQIQKGKFIQSFGCLLAVDEKSLKIMAYSENAPEMLTMVNHAVPTVNEHQ 3213
            RS ++T AYLH IQKGK IQ FG LLA+D+K+ K++AYSENAPEMLTMV+HAVP+V EH 
Sbjct: 61   RSDKVTTAYLHHIQKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHP 120

Query: 3212 ILGIGTDLRTIFTVPSAAALQKAVGFTDINLLNPILVHCKTSGKPYYAIAHRVTGSLIID 3033
            +LGIGTD+RTIF+ PSA+AL KA+GF +++LLNPILVHCKTSGKP+YAI HRVTGSLIID
Sbjct: 121  VLGIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIID 180

Query: 3032 FEPVKPYEVPMTAAGALQSYKLASKSVNRLQALSGGSMERLCDTMVQEVFELTGYDRVMA 2853
            FEPVKPYEVPMTAAGALQSYKLA+K++ RLQ+L  GS+ERLCDTMVQEVFELTGYDRVMA
Sbjct: 181  FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMA 240

Query: 2852 YKFHDDDHGEVTAEITKPDLEPYLGLHYPATDIPQAARFLFLKNKVRIICDCRAKNVKVL 2673
            YKFHDDDHGEV +EITKP LEPYLGLHYPATDIPQAARFLF+KNKVR+ICDCRAK+++VL
Sbjct: 241  YKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVL 300

Query: 2672 QDENLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEIGETSDSNNI-KS 2496
            QDE LPF+LTLCGSTLRAPHSCH+QYMENMNSIASLVMAVV+ND DE GE+S+S    K 
Sbjct: 301  QDEKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKR 360

Query: 2495 KKLWGLVVCHNTSPRFVPFPLRYACEFLAQVFSIHVSKELELKNQIAEKNILRTQTLLCD 2316
            K+LWGLVVCH+T+PRFVPFPLRYACEFLAQVF+IHV+KELEL++QI EKNILRTQTLLCD
Sbjct: 361  KRLWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCD 420

Query: 2315 LLMRDAPLGIVSQSPNMMDLVKCDGAALLFKNKVYRLGATPSDYQLMDIVSWLNEYHMDS 2136
            +LMRDAPLGIVSQSPN+MDLVKCDGAALL+KNKV+RLG TPSD+QL DI SWL+EYHMDS
Sbjct: 421  MLMRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDS 480

Query: 2135 TGLSTDSLYDAGFPGALALGDVVCGMAVVKITSHDMLFWFRSPAAGHIRWGGAMHDPDEK 1956
            TGLSTDSLYDAG+PGALALGD VCGMA VKITS D LFWFRS  A  +RWGGA H+P EK
Sbjct: 481  TGLSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEK 540

Query: 1955 DDGRKMHPRSSFKAFLEVVKTRSSTWKDLEMDAIHSLQLILRKALNDEKAIVPNGNESHM 1776
            DDGRKMHPRSSFKAFLEVVKTRS  WKD EMDAIHSLQLILR A  D +A+        +
Sbjct: 541  DDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAM-------DV 593

Query: 1775 NTSAIQTKLSDLNIDGIQELEAVTSEMVRLIETATVPIFAVDANQIVNGWNMKIAELTGL 1596
            NT+AI TKL+DL I+G+QELEAVTSEMVRLIETA+VPI AVD + +VNGWN KI+ELT L
Sbjct: 594  NTNAIHTKLNDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSL 653

Query: 1595 PVDKAIGQHLLTLVEDSSIDTVETMLALALQGKEEQGIQFEFKTHGSREDSGSISLVVNA 1416
            PVDKAIG HLLTLVEDSS DTV+ ML LALQG+EEQ +QFE KTHGS+ DSG ISLVVNA
Sbjct: 654  PVDKAIGMHLLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNA 713

Query: 1415 CANRGLHDNVVGVCFVAQDVTGHKTIMDKFTRVEGDYKAIVHNPNPLIPPIFGTDEFGWC 1236
            CA+R L +NVVGVCFVAQD+T  KT+MDKFTR+EGDYKAIV NPNPLIPPIFGTDEFGWC
Sbjct: 714  CASRDLDENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWC 773

Query: 1235 FEWNQAMSELSGWHKEEVIDKMLLGEIFGVQASCCRLKSKEAFVNLGVALNNAMTGQTSE 1056
             EWN AM +LSGW++EEV+DKMLLGE+FG   +CCRLK++EAFV LG+ LN+ MTG+ SE
Sbjct: 774  SEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESE 833

Query: 1055 KIRFGFFARDGKYVECLLCASKKLDGDGTVTGIFCFXXXXXXXXXXXLHIQHLAEQIAVK 876
            K+ FGFF++ GKYVECLL  SKKLD +G VTG+FCF           LHIQ L+EQ A+K
Sbjct: 834  KVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALK 893

Query: 875  RLKVLAYLRRQSKNPLAGINFIRTKLEEANLGEEQKKLLRTSGHCQLQLNKXXXXXXXXX 696
            RLK LAY++RQ KNPL+GI F R  +E+ +LGEEQ+++L TS  CQ QL+K         
Sbjct: 894  RLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDS 953

Query: 695  XXDGYLDLEMSEFMLQDVYVAARSQVIMKSSGKAIQIVDTFSKEIMSVTLYGDSLRLQQV 516
              +GYLDLEM EF L++V VA+ SQV++KS+GK IQIV+   + IM+ TLYGD LRLQQV
Sbjct: 954  IIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQV 1013

Query: 515  LADFLMICVNFTPLGGLLGISATSTKDNLGQSVQLVRLEFRITHAG-AVPEDLLSQMFGS 339
            LADFL+I VNFTP GG L ++A+  KD LG+SV LV LE RITHAG  VPE LL+QMFG+
Sbjct: 1014 LADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLLNQMFGN 1073

Query: 338  NSETSEEGVSLLISRKLVKLMNGDVHYLREAGKSTFIISVELAGVGKR 195
            N + SEEG+SLLISRKLVKLMNGDV YLREAGKSTFIIS+ELA   K+
Sbjct: 1074 NGDASEEGISLLISRKLVKLMNGDVQYLREAGKSTFIISIELAAARKK 1121


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1623 bits (4204), Expect = 0.0
 Identities = 816/1124 (72%), Positives = 939/1124 (83%), Gaps = 5/1124 (0%)
 Frame = -3

Query: 3566 MSTSRPANSSTNSARATQNSRVVL-TTIDAKLHAXXXXXXXXXXXXXSVRATTA--ENLS 3396
            MS+SRP+ SST SAR+  ++R++  TTIDAKLHA             SVR T+   +   
Sbjct: 1    MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERK 60

Query: 3395 VRSHQLTNAYLHQIQKGKFIQSFGCLLAVDEKSLKIMAYSENAPEMLTMVNHAVPTVNEH 3216
             +S ++T AYL+QIQKGKFIQ FGCLLA+DEK+ K++A+SENAPEMLTMV+HAVP+V E 
Sbjct: 61   PKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGEL 120

Query: 3215 QILGIGTDLRTIFTVPSAAALQKAVGFTDINLLNPILVHCKTSGKPYYAIAHRVTGSLII 3036
              LGIGTD+RTIFT PSAAALQKA+GF +++LLNP+LVHCKTSGKPYYAI HRVTGSLII
Sbjct: 121  PALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLII 180

Query: 3035 DFEPVKPYEVPMTAAGALQSYKLASKSVNRLQALSGGSMERLCDTMVQEVFELTGYDRVM 2856
            DFEPVKPYEVPMTAAGALQSYKLA+K++ RLQAL  GSMERLCDTMVQEVFELTGYDRVM
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM 240

Query: 2855 AYKFHDDDHGEVTAEITKPDLEPYLGLHYPATDIPQAARFLFLKNKVRIICDCRAKNVKV 2676
             YKFHDDDHGEV AEITKP L+PYLGLHYPATDIPQAARFLF+KNKVR+ICDCRAK+VKV
Sbjct: 241  TYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV 300

Query: 2675 LQDENLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEIGETSDSNNI-K 2499
            +QDE LPF+LTLCGSTLRAPH CHLQYMENM+SIASLVMAVV+ND DE GE+SDS    K
Sbjct: 301  VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQK 360

Query: 2498 SKKLWGLVVCHNTSPRFVPFPLRYACEFLAQVFSIHVSKELELKNQIAEKNILRTQTLLC 2319
             K+LWGLVVCHNT+PRFVPFPLRYACEFLAQVF+IHV+KELEL++QI EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC 420

Query: 2318 DLLMRDAPLGIVSQSPNMMDLVKCDGAALLFKNKVYRLGATPSDYQLMDIVSWLNEYHMD 2139
            D+LMR APLGIVSQSPN+MDLVKCDGAALL+KNK++RLG TPSD+QL DIVSWL+EYH D
Sbjct: 421  DMLMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTD 480

Query: 2138 STGLSTDSLYDAGFPGALALGDVVCGMAVVKITSHDMLFWFRSPAAGHIRWGGAMHDPDE 1959
            STGLSTDSLYDAGFPGALALGDVVCGMA V+I+    LFW+RS  A  +RWGGA H+P E
Sbjct: 481  STGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGE 540

Query: 1958 KDDGRKMHPRSSFKAFLEVVKTRSSTWKDLEMDAIHSLQLILRKALNDEKAIVPNGNESH 1779
            KDDGRKMHPRSSFKAFLEVVKTRS  WKD EMDAIHSLQLILR A  D  A+        
Sbjct: 541  KDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAM-------D 593

Query: 1778 MNTSAIQTKLSDLNIDGIQELEAVTSEMVRLIETATVPIFAVDANQIVNGWNMKIAELTG 1599
             NT+ I TKL+DL IDG+QELEAVT+EMVRLIETA+VPIFAVD +  +NGWN KIAELTG
Sbjct: 594  SNTNIIHTKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTG 653

Query: 1598 LPVDKAIGQHLLTLVEDSSIDTVETMLALALQGKEEQGIQFEFKTHGSREDSGSISLVVN 1419
            LPVD+AIG HLLTLVEDSS+DTV  ML LALQGKEE+ ++FE KTHG   DS  ISL+VN
Sbjct: 654  LPVDEAIGNHLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVN 713

Query: 1418 ACANRGLHDNVVGVCFVAQDVTGHKTIMDKFTRVEGDYKAIVHNPNPLIPPIFGTDEFGW 1239
            ACA+R + D+VVGVCF+AQD+TG K IMDKFTR+EGDY+AI+ NP+PLIPPIFGTD+FGW
Sbjct: 714  ACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGW 773

Query: 1238 CFEWNQAMSELSGWHKEEVIDKMLLGEIFGVQASCCRLKSKEAFVNLGVALNNAMTGQTS 1059
            C EWN AM++L+GW +++VIDKMLLGE+FG QA+CCRLK++EAFVN GV LNNAMTGQ  
Sbjct: 774  CSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQEC 833

Query: 1058 EKIRFGFFARDGKYVECLLCASKKLDGDGTVTGIFCFXXXXXXXXXXXLHIQHLAEQIAV 879
             KI FGFFAR+GKYVECLLC SK+LD +G VTG+FCF           LHIQ L+EQ A+
Sbjct: 834  AKISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTAL 893

Query: 878  KRLKVLAYLRRQSKNPLAGINFIRTKLEEANLGEEQKKLLRTSGHCQLQLNKXXXXXXXX 699
            KRLKVLAY+RRQ +NPL+GI F R  LE  NLGEEQK +LRTS  CQ QLNK        
Sbjct: 894  KRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLD 953

Query: 698  XXXDGYLDLEMSEFMLQDVYVAARSQVIMKSSGKAIQIVDTFSKEIMSVTLYGDSLRLQQ 519
               DGYLDLEM EF L +V VA+ SQ++MKS+GK I IV+   +++++ TLYGDS RLQQ
Sbjct: 954  SIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQ 1013

Query: 518  VLADFLMICVNFTPLGGLLGISATSTKDNLGQSVQLVRLEFRITH-AGAVPEDLLSQMFG 342
            VLA+FL++CVN TP GG L IS T TKD +G+SVQL  LE RI+H  G VPE+LLSQMFG
Sbjct: 1014 VLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELLSQMFG 1073

Query: 341  SNSETSEEGVSLLISRKLVKLMNGDVHYLREAGKSTFIISVELA 210
            + +E SEEG+SLLISRKLVKLMNG+V YLREAG+STFIISVELA
Sbjct: 1074 TEAEASEEGISLLISRKLVKLMNGEVQYLREAGRSTFIISVELA 1117


>ref|XP_002318913.1| phytochrome [Populus trichocarpa] gi|222857289|gb|EEE94836.1|
            phytochrome [Populus trichocarpa]
          Length = 1126

 Score = 1619 bits (4193), Expect = 0.0
 Identities = 812/1125 (72%), Positives = 933/1125 (82%), Gaps = 5/1125 (0%)
 Frame = -3

Query: 3566 MSTSRPANSSTNSARATQNSRVVL-TTIDAKLHAXXXXXXXXXXXXXSVRATTAE--NLS 3396
            MS+SRP++SS+NSAR+  ++R++  TT+DAKLHA             SVR T +   +  
Sbjct: 1    MSSSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQP 60

Query: 3395 VRSHQLTNAYLHQIQKGKFIQSFGCLLAVDEKSLKIMAYSENAPEMLTMVNHAVPTVNEH 3216
             RS ++T  YLH IQKGK IQ FGCLLA+DEK+ K++AYSENAPE+LTMV+HAVP+V EH
Sbjct: 61   PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEH 120

Query: 3215 QILGIGTDLRTIFTVPSAAALQKAVGFTDINLLNPILVHCKTSGKPYYAIAHRVTGSLII 3036
             +LGIGTD+RTIFT PSA+ALQKA+GF D++LLNPILVHCKTSGKP+YAI HRVTGSLII
Sbjct: 121  PVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 180

Query: 3035 DFEPVKPYEVPMTAAGALQSYKLASKSVNRLQALSGGSMERLCDTMVQEVFELTGYDRVM 2856
            DFEPVKPYEVPMTAAGALQSYKLA+K++ RLQ+L  GSMERLCDTMVQEVFELTGYDR M
Sbjct: 181  DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAM 240

Query: 2855 AYKFHDDDHGEVTAEITKPDLEPYLGLHYPATDIPQAARFLFLKNKVRIICDCRAKNVKV 2676
            AYKFHDDDHGEV +E+TKP +EPYLGLHYPATDIPQA+RFLF+KNKVR+I DC AK+VKV
Sbjct: 241  AYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKV 300

Query: 2675 LQDENLPFELTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINDSDEIGETSDS-NNIK 2499
            LQDE LPF+LTLCGSTLRAPHSCHLQYMENMNSIASLVMAVV+ND DE G+T DS N  K
Sbjct: 301  LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQK 360

Query: 2498 SKKLWGLVVCHNTSPRFVPFPLRYACEFLAQVFSIHVSKELELKNQIAEKNILRTQTLLC 2319
             K+LWGLVVCHNTSPRFVPFPLRYACEFLAQVF+IHV+KELEL+NQI EKNILRTQTLLC
Sbjct: 361  RKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC 420

Query: 2318 DLLMRDAPLGIVSQSPNMMDLVKCDGAALLFKNKVYRLGATPSDYQLMDIVSWLNEYHMD 2139
            D+LMRDAPLGIV+QSPN+MDLVKCDGA L ++NK++RLG TPSD QL DI  WL+EYHMD
Sbjct: 421  DMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMD 480

Query: 2138 STGLSTDSLYDAGFPGALALGDVVCGMAVVKITSHDMLFWFRSPAAGHIRWGGAMHDPDE 1959
            STGLSTDSLYDAG+PGALALGDVVCGMA V+ITS DMLFWFRS  A  IRWGGA H+P E
Sbjct: 481  STGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGE 540

Query: 1958 KDDGRKMHPRSSFKAFLEVVKTRSSTWKDLEMDAIHSLQLILRKALNDEKAIVPNGNESH 1779
            KDDGR+MHPRSSFKAFLEVVKTRS  WKD EMDAIHSLQLILR A  D + +        
Sbjct: 541  KDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETM-------D 593

Query: 1778 MNTSAIQTKLSDLNIDGIQELEAVTSEMVRLIETATVPIFAVDANQIVNGWNMKIAELTG 1599
            ++T  I  +LSDL I+G+QELEAVTSEMVRLIETATVPI AVD + +VNGWN KI+ELTG
Sbjct: 594  VDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTG 653

Query: 1598 LPVDKAIGQHLLTLVEDSSIDTVETMLALALQGKEEQGIQFEFKTHGSREDSGSISLVVN 1419
            L VDKAIG+HLLTLVEDSS+D V+ ML LALQGKEEQ IQFE KTHGS+ + G I LVVN
Sbjct: 654  LLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVN 713

Query: 1418 ACANRGLHDNVVGVCFVAQDVTGHKTIMDKFTRVEGDYKAIVHNPNPLIPPIFGTDEFGW 1239
            ACA+R LH+NVVGVCFV QD+TG K +MDKFTR+EGDYKAIV N NPLIPPIFGTDEFGW
Sbjct: 714  ACASRDLHENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGW 773

Query: 1238 CFEWNQAMSELSGWHKEEVIDKMLLGEIFGVQASCCRLKSKEAFVNLGVALNNAMTGQTS 1059
            C EWN AM+ L+GW +EEV+DKMLLGE+FG+  +CCRLK++EAFVNLGV LN AMTGQ S
Sbjct: 774  CSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQES 833

Query: 1058 EKIRFGFFARDGKYVECLLCASKKLDGDGTVTGIFCFXXXXXXXXXXXLHIQHLAEQIAV 879
            EK+ FGFFAR GKYVECLLC SKKLD +G VTG+FCF           LH+Q L+EQ A+
Sbjct: 834  EKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTAL 893

Query: 878  KRLKVLAYLRRQSKNPLAGINFIRTKLEEANLGEEQKKLLRTSGHCQLQLNKXXXXXXXX 699
            KRLK LAYL+RQ  NPL+GI F    +E   LG EQK+LL TS  CQ QL+K        
Sbjct: 894  KRLKALAYLKRQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLD 953

Query: 698  XXXDGYLDLEMSEFMLQDVYVAARSQVIMKSSGKAIQIVDTFSKEIMSVTLYGDSLRLQQ 519
               +GYLDLEM EF L++V VAA SQV+MKS+ K I+I++  ++E M+ TLYGDS+RLQQ
Sbjct: 954  SIIEGYLDLEMVEFTLREVLVAATSQVMMKSNEKGIRIINDAAEETMAETLYGDSIRLQQ 1013

Query: 518  VLADFLMICVNFTPLGGLLGISATSTKDNLGQSVQLVRLEFRITHAGA-VPEDLLSQMFG 342
            VLADFL + VNFTP GGLL +SA+ TKD LGQSV LV LE RI H GA +PE LL QMFG
Sbjct: 1014 VLADFLQMSVNFTPSGGLLSVSASLTKDQLGQSVYLVHLELRIRHPGAGIPEALLDQMFG 1073

Query: 341  SNSETSEEGVSLLISRKLVKLMNGDVHYLREAGKSTFIISVELAG 207
             +++ S EG+SL+ISRKLVKLMNGDV Y+REAGKS+FIISVELAG
Sbjct: 1074 EDTDASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAG 1118