BLASTX nr result
ID: Angelica22_contig00004009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00004009
(1840 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi... 448 e-150
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,... 436 e-148
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2... 429 e-144
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2... 414 e-141
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides] 413 e-141
>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 448 bits (1153), Expect(2) = e-150
Identities = 240/415 (57%), Positives = 289/415 (69%), Gaps = 7/415 (1%)
Frame = +2
Query: 341 MSLYNKGALTADKKPSIVSKLTTLNPNASEFVPSALXXXXXXXXXXXXXXXXXXXGNKAL 520
MSL KG + K +K+TTLNPNA+EFVP AL G L
Sbjct: 1 MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSGT--L 58
Query: 521 GKTVLDRTESSVSNNSDDEAHQYWRCQLPDDITPDFKVMEKDETPVVNDLPFSSLSLIDG 700
GK LDR+ESS+SNNSD+EAHQYWRCQLPDDITPDFKVM +DE+ + L + LSL D
Sbjct: 59 GKAKLDRSESSISNNSDEEAHQYWRCQLPDDITPDFKVMGEDESQALGGLSLAGLSLHDS 118
Query: 701 NDMSRFPASHGSALMLKEQQELSPHRIDGGSFAQKMAFSVAPYVEDPLSASYLNVHAKPW 880
+ SRF A GS +L EQQELSPH ++G SF KM +S +PY EDP SA++L++ KPW
Sbjct: 119 TETSRFSA--GSGYILNEQQELSPHHVNGNSFTDKMRYSASPYGEDPSSATFLHLPNKPW 176
Query: 881 DTNL-SSDNLLNGVREGTSFNGNS------DMLSEQQLLESTDMYHLEFLASQFPGFAAE 1039
D + D LL+ REGT +NGNS DML+E +++ TDM LEFLA QFPGFAAE
Sbjct: 177 DKQIVHGDQLLSNGREGTPYNGNSRHGFVNDMLNEHAMVDETDMNPLEFLALQFPGFAAE 236
Query: 1040 SLAEVYYANGGDLNLTIEMLTQLELQVEGGINQSHNSKALSAPNLTALDFPALSAGDGQN 1219
SL EVY+AN DLN+TIEMLTQLELQV+GG +Q+ NSK LSAPNL+ LDFP+L DGQN
Sbjct: 237 SLTEVYFANECDLNMTIEMLTQLELQVDGGFSQNMNSKTLSAPNLSGLDFPSLPVPDGQN 296
Query: 1220 GIRKYHEDELQPNGSPYRASDKDNLLLFRSSSSIIPSRGAIDFASAVRKMASQDSGIWKY 1399
G+ KY D++Q +PYR+SDKDNLL+F+S+SS IPSRGA DFASAVRK+A+QDSGIWK+
Sbjct: 297 GLPKYAGDDIQQGVNPYRSSDKDNLLMFKSNSS-IPSRGATDFASAVRKLATQDSGIWKF 355
Query: 1400 DRNGSADXXXXXXXXXXXXXXXYIGGQGRGIYGDRVQGRTPARAAPAWLETGEAV 1564
DRNG+AD Y G GRG YGDR+Q R AR APAW+ETGEAV
Sbjct: 356 DRNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAV 410
Score = 111 bits (277), Expect(2) = e-150
Identities = 53/65 (81%), Positives = 61/65 (93%)
Frame = +3
Query: 1644 ANMYSESREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQE 1823
ANMYSE REEARD+ARLRN YFEQA+QAYL+GNKALAKELS+KG+LH++ MKAAH KAQE
Sbjct: 411 ANMYSELREEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKAQE 470
Query: 1824 SIYRQ 1838
+IYRQ
Sbjct: 471 AIYRQ 475
>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1439
Score = 436 bits (1122), Expect(2) = e-148
Identities = 237/418 (56%), Positives = 289/418 (69%), Gaps = 10/418 (2%)
Frame = +2
Query: 341 MSLYNKGALTADKKPSIVSKLTTLNPNASEFVPSALXXXXXXXXXXXXXXXXXXX--GNK 514
MSL KG+ T K +I SK T LNPNA+EFVP +L +
Sbjct: 1 MSLSKKGSQTNTTKLNIPSKATALNPNAAEFVPFSLRSLSSPSGSTSNAAATTARFATSG 60
Query: 515 ALGKTVLDRTESSVSNNSDDEAHQYWRCQLPDDITPDFKVMEKDETPVVNDLPFSSLSLI 694
+GK VLDR+ESS+S SD+EAHQ+WR QLPDDITPDFKVM +DE+ + L + LSL
Sbjct: 61 PVGKAVLDRSESSISTTSDEEAHQFWRHQLPDDITPDFKVMGEDESQSLGGLSLAGLSLH 120
Query: 695 DGNDMSRFPASHGSALMLKEQQELSPHRIDGGSFAQKMAFSVAPYVEDPLSAS-YLNVHA 871
D +++ +FPAS GS +L EQQE SP I+G SF++KM +++A Y EDP SA+ YLN+
Sbjct: 121 DSSEVPKFPASVGSGYILTEQQEPSPRHINGSSFSEKMRYAIASYGEDPTSAAGYLNLPT 180
Query: 872 KPWDTNL-SSDNLLNGVREGTSFNGNS------DMLSEQQLLESTDMYHLEFLASQFPGF 1030
KPWD + ++D+LL RE +NGNS DML EQ +++ DM L+FLAS FPGF
Sbjct: 181 KPWDKQIINNDHLLGNGREVHPYNGNSRRGFMNDMLGEQAIVDEPDMNPLDFLASHFPGF 240
Query: 1031 AAESLAEVYYANGGDLNLTIEMLTQLELQVEGGINQSHNSKALSAPNLTALDFPALSAGD 1210
AAESLAEVY+ANG DLNLTIEMLTQLELQV+GG NQ+ NSKALSAPNL+A+DFPAL D
Sbjct: 241 AAESLAEVYFANGYDLNLTIEMLTQLELQVDGGFNQNMNSKALSAPNLSAMDFPALPVPD 300
Query: 1211 GQNGIRKYHEDELQPNGSPYRASDKDNLLLFRSSSSIIPSRGAIDFASAVRKMASQDSGI 1390
QN KY D++Q +G+PYR+SDK+N+LLF+SSSS GAIDFASAVRK+ASQDSGI
Sbjct: 301 SQNSPSKYSGDDIQQSGNPYRSSDKENILLFKSSSSTPSRGGAIDFASAVRKLASQDSGI 360
Query: 1391 WKYDRNGSADXXXXXXXXXXXXXXXYIGGQGRGIYGDRVQGRTPARAAPAWLETGEAV 1564
WKY+RNGSAD Y G GRGIY +R Q R ARAAP WLETGEAV
Sbjct: 361 WKYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGEAV 418
Score = 118 bits (295), Expect(2) = e-148
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +3
Query: 1644 ANMYSESREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQE 1823
ANMYSE REEARD+ARLRN YFEQARQAYL+GNKALAKELSVKGQLHNM MKAAH KAQE
Sbjct: 419 ANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQE 478
Query: 1824 SIYR 1835
SIYR
Sbjct: 479 SIYR 482
>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
predicted protein [Populus trichocarpa]
Length = 583
Score = 429 bits (1103), Expect(2) = e-144
Identities = 235/418 (56%), Positives = 290/418 (69%), Gaps = 10/418 (2%)
Frame = +2
Query: 341 MSLYNKGALTADKKPSIVSKLTTLNPNASEFVPSALXXXXXXXXXXXXXXXXXXX--GNK 514
M+L KG+LT D K S+ +K TTLNPNA+EFVP +L +
Sbjct: 1 MNLSKKGSLTNDTKLSLPNKATTLNPNAAEFVPFSLRSSSSPSGSTSNTTDAATKLATSG 60
Query: 515 ALGKTVLDRTESSVSNNSDDEAHQYWRCQLPDDITPDFKVMEKDETPVVNDLPFSSLSLI 694
+GK+VLDR+ESSVSN SDDEAHQ+WR QLPDDITPDFKVM +DE+ + L + LSL
Sbjct: 61 TVGKSVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMNEDESQGLGGLSLAGLSLH 120
Query: 695 DGNDMSRFPASHGSALMLKEQQELSPHRIDGGSFAQKMAFSVAPYVEDPLSASYLNVHAK 874
D +++ RF AS S +L EQQE SPH I+G SF++ M ++VA Y EDP SAS+LN+ K
Sbjct: 121 DSSEVPRFHASSRSGYVLTEQQEPSPHHINGSSFSENMRYAVASYGEDPTSASFLNLPTK 180
Query: 875 PWDTNL-SSDNLLNGVREGTSFNGN------SDMLSEQQLLESTDMYHLEFLASQFPGFA 1033
PWD + +SD LL+ RE +NGN S++L E +++ T++ LEFLASQFPGFA
Sbjct: 181 PWDKQIANSDQLLSNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLEFLASQFPGFA 240
Query: 1034 AESLAEVYYANGGDLNLTIEMLTQLELQVEGGINQSHNSKALSAP-NLTALDFPALSAGD 1210
AESLAEVY+AN DLNLTIEMLTQLELQV+GG NQ+ NSK +SAP NL+ALDFPAL+ D
Sbjct: 241 AESLAEVYFANACDLNLTIEMLTQLELQVDGGFNQTTNSKTVSAPTNLSALDFPALTVPD 300
Query: 1211 GQNGIRKYHEDELQPNGSPYRASDKDNLLLFRSSSSIIPSRGAIDFASAVRKMASQDSGI 1390
QNG KY D+LQ G PYR+S+KDN+L+F+S +S SRGA+DFASAVRK+ASQDS +
Sbjct: 301 NQNGPSKYAGDDLQQAGIPYRSSNKDNMLVFKSGAS-FSSRGAVDFASAVRKLASQDSSM 359
Query: 1391 WKYDRNGSADXXXXXXXXXXXXXXXYIGGQGRGIYGDRVQGRTPARAAPAWLETGEAV 1564
W +DRNGSAD Y GG GRGIY DR Q R +AAP WLETGEAV
Sbjct: 360 WNHDRNGSADSTVGSSRSSHVLASAYSGGHGRGIYADRSQSRGSGQAAPVWLETGEAV 417
Score = 112 bits (279), Expect(2) = e-144
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = +3
Query: 1644 ANMYSESREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQE 1823
A+MYSE REEARD+AR+RN Y EQARQAYL+GNKALAKELS KGQLHNM MK AH KAQE
Sbjct: 418 ASMYSEMREEARDHARIRNAYLEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQE 477
Query: 1824 SIYRQ 1838
SIYRQ
Sbjct: 478 SIYRQ 482
>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
predicted protein [Populus trichocarpa]
Length = 581
Score = 414 bits (1065), Expect(2) = e-141
Identities = 230/417 (55%), Positives = 281/417 (67%), Gaps = 9/417 (2%)
Frame = +2
Query: 341 MSLYNKGALTADKKPSIVSKLTTLNPNASEFVPSALXXXXXXXXXXXXXXXXXXXGNKA- 517
MSL KG+LT D K ++ SK TTLNPNA+EFVP +L +
Sbjct: 1 MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60
Query: 518 -LGKTVLDRTESSVSNNSDDEAHQYWRCQLPDDITPDFKVMEKDETPVVNDLPFSSLSLI 694
+GK VLDR+ESSVSN SDDEAHQ+WR QLPDDITPDFKVM DE+ + L + LSL
Sbjct: 61 TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120
Query: 695 DGNDMSRFPASHGSALMLKEQQELSPHRIDGGSFAQKMAFSVAPYVEDPLSASYLNVHAK 874
D +++ RF AS S +L EQQE SP ++G SF +KM + A Y EDP SAS+LN+ K
Sbjct: 121 D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179
Query: 875 PWDTNLSS-DNLLNGVREGTSFNGNS------DMLSEQQLLESTDMYHLEFLASQFPGFA 1033
PWD +++ D+LL RE +NGNS ++L E +++ T++ L FLASQFPGFA
Sbjct: 180 PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239
Query: 1034 AESLAEVYYANGGDLNLTIEMLTQLELQVEGGINQSHNSKALSAPNLTALDFPALSAGDG 1213
ESLAEVY+A+G DLNLT+EMLTQLELQV+G NQ+ NSK LSAPNL+ALDFPAL+ D
Sbjct: 240 TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299
Query: 1214 QNGIRKYHEDELQPNGSPYRASDKDNLLLFRSSSSIIPSRGAIDFASAVRKMASQDSGIW 1393
QNG KY D+LQ PYR+S+KDN+LLF+ S SRGA+DFASAVRK+ASQDS +W
Sbjct: 300 QNGSSKYTGDDLQQASVPYRSSNKDNMLLFKPGGS-FSSRGAVDFASAVRKLASQDSSMW 358
Query: 1394 KYDRNGSADXXXXXXXXXXXXXXXYIGGQGRGIYGDRVQGRTPARAAPAWLETGEAV 1564
K+DRNGSAD Y GG GRGIY DR+Q R R AP WLETGEAV
Sbjct: 359 KHDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAV 415
Score = 116 bits (291), Expect(2) = e-141
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +3
Query: 1644 ANMYSESREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQE 1823
ANMYSE REEARD+ARLRN YFEQARQAYL+GNKALAKELSVKGQLHNM MK AH KAQE
Sbjct: 416 ANMYSEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQE 475
Query: 1824 SIYRQ 1838
SIY Q
Sbjct: 476 SIYHQ 480
>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 581
Score = 413 bits (1062), Expect(2) = e-141
Identities = 230/417 (55%), Positives = 280/417 (67%), Gaps = 9/417 (2%)
Frame = +2
Query: 341 MSLYNKGALTADKKPSIVSKLTTLNPNASEFVPSALXXXXXXXXXXXXXXXXXXXGNKA- 517
MSL KG+LT D K ++ SK TTLNPNA+EFVP +L +
Sbjct: 1 MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60
Query: 518 -LGKTVLDRTESSVSNNSDDEAHQYWRCQLPDDITPDFKVMEKDETPVVNDLPFSSLSLI 694
+GK VLDR+ESSVSN SDDEAHQ+WR QLPDDITPDFKVM DE+ + L + LSL
Sbjct: 61 TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120
Query: 695 DGNDMSRFPASHGSALMLKEQQELSPHRIDGGSFAQKMAFSVAPYVEDPLSASYLNVHAK 874
D +++ RF AS S +L EQQE SP ++G SF +KM + A Y EDP SAS+LN+ K
Sbjct: 121 D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179
Query: 875 PWDTNLSS-DNLLNGVREGTSFNGNS------DMLSEQQLLESTDMYHLEFLASQFPGFA 1033
PWD +++ D+LL RE +NGNS ++L E +++ T++ L FLASQFPGFA
Sbjct: 180 PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239
Query: 1034 AESLAEVYYANGGDLNLTIEMLTQLELQVEGGINQSHNSKALSAPNLTALDFPALSAGDG 1213
ESLAEVY+A+G DLNLT+EMLTQLELQV+G NQ+ NSK LSAPNL+ALDFPAL+ D
Sbjct: 240 TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299
Query: 1214 QNGIRKYHEDELQPNGSPYRASDKDNLLLFRSSSSIIPSRGAIDFASAVRKMASQDSGIW 1393
QNG KY D+LQ PYR+S+KDN LLF+ S SRGA+DFASAVRK+ASQDS +W
Sbjct: 300 QNGSSKYTGDDLQQASVPYRSSNKDNTLLFKPGGS-FSSRGAVDFASAVRKLASQDSSMW 358
Query: 1394 KYDRNGSADXXXXXXXXXXXXXXXYIGGQGRGIYGDRVQGRTPARAAPAWLETGEAV 1564
K+DRNGSAD Y GG GRGIY DR+Q R R AP WLETGEAV
Sbjct: 359 KHDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAV 415
Score = 116 bits (291), Expect(2) = e-141
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +3
Query: 1644 ANMYSESREEARDYARLRNVYFEQARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQE 1823
ANMYSE REEARD+ARLRN YFEQARQAYL+GNKALAKELSVKGQLHNM MK AH KAQE
Sbjct: 416 ANMYSEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQE 475
Query: 1824 SIYRQ 1838
SIY Q
Sbjct: 476 SIYHQ 480